hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20100311/iprscan-20100311-17512653/chunk_1/iprscan-20100311-17512653.nocrc
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Query sequence: bm01576
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 410.7   8.1e-119  16

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/16     26    48 ..     1    23 []    18.6     0.86
SM00355      2/16     88   110 ..     1    23 []    21.6     0.11
SM00355      3/16    116   138 ..     1    23 []    26.3   0.0043
SM00355      4/16    144   166 ..     1    23 []    18.7     0.81
SM00355      5/16    172   194 ..     1    23 []    26.7   0.0031
SM00355      6/16    200   222 ..     1    23 []    23.3    0.034
SM00355      7/16    228   250 ..     1    23 []    24.5    0.014
SM00355      8/16    256   278 ..     1    23 []    29.1  0.00059
SM00355      9/16    284   306 ..     1    23 []    26.8   0.0029
SM00355     10/16    312   334 ..     1    23 []    28.2   0.0011
SM00355     11/16    340   362 ..     1    23 []    24.0    0.021
SM00355     12/16    368   390 ..     1    23 []    28.6  0.00085
SM00355     13/16    396   418 ..     1    23 []    25.7   0.0063
SM00355     14/16    520   542 ..     1    23 []    26.0   0.0051
SM00355     15/16    548   570 ..     1    23 []    31.1  0.00015
SM00355     16/16    576   598 ..     1    23 []    31.2  0.00014

Alignments of top-scoring domains:
SM00355: domain 1 of 16, from 26 to 48: score 18.6, E = 0.86
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC   C k+f++++   rH  +H   
     bm01576    26    YKCLS-CTKTFPNApRAARHAATH    48   

SM00355: domain 2 of 16, from 88 to 110: score 21.6, E = 0.11
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y Cp+ C+k ++++++L+ H r+H   
     bm01576    88    YACPL-CPKAYKTApELRSHGRSH    110  

SM00355: domain 3 of 16, from 116 to 138: score 26.3, E = 0.0043
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + Cp+ Cg++f ++  L+ H+ +H   
     bm01576   116    FPCPE-CGRRFMQPvCLRVHLASH    138  

SM00355: domain 4 of 16, from 144 to 166: score 18.7, E = 0.81
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C + C+k +   + Lk H+r H   
     bm01576   144    FRCAH-CPKAYGALsKLKIHQRGH    166  

SM00355: domain 5 of 16, from 172 to 194: score 26.7, E = 0.0031
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C   Cgksf +++ +++H r+H   
     bm01576   172    YACAD-CGKSFADPsVFRKHRRTH    194  

SM00355: domain 6 of 16, from 200 to 222: score 23.3, E = 0.034
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C+  Cgk +   ++L++H r+H   
     bm01576   200    YSCER-CGKAYAELkDLRNHERSH    222  

SM00355: domain 7 of 16, from 228 to 250: score 24.5, E = 0.014
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C++ Cgksfs+ ++L+ H+r+H   
     bm01576   228    FLCSE-CGKSFSRSsSLTCHQRIH    250  

SM00355: domain 8 of 16, from 256 to 278: score 29.1, E = 0.00059
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+Cp  Cgk f++ ++++ H r+H   
     bm01576   256    YRCPA-CGKGFTQLsSYQSHERTH    278  

SM00355: domain 9 of 16, from 284 to 306: score 26.8, E = 0.0029
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + Cp  Cg+ fs++++++rH+r H   
     bm01576   284    FLCPR-CGRMFSDPsSFRRHQRAH    306  

SM00355: domain 10 of 16, from 312 to 334: score 28.2, E = 0.0011
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f+++ +L  H rvH   
     bm01576   312    YHCEK-CGKDFRQPaDLAMHRRVH    334  

SM00355: domain 11 of 16, from 340 to 362: score 24.0, E = 0.021
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC + C+k+f    +LkrH  vH   
     bm01576   340    FKCLQ-CDKTFVASwDLKRHALVH    362  

SM00355: domain 12 of 16, from 368 to 390: score 28.6, E = 0.00085
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cg+ f  + +L++H rvH   
     bm01576   368    FRCEE-CGRAFAERaSLTKHSRVH    390  

SM00355: domain 13 of 16, from 396 to 418: score 25.7, E = 0.0063
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C+  Cgksf   ++L++H r+H   
     bm01576   396    FHCNA-CGKSFVVSsSLRKHERTH    418  

SM00355: domain 14 of 16, from 520 to 542: score 26.0, E = 0.0051
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C + C+++fs+ + L+rH r+H   
     bm01576   520    FVCRE-CKETFSTMtLLRRHERSH    542  

SM00355: domain 15 of 16, from 548 to 570: score 31.1, E = 0.00015
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      + C++ Cgksfs++  L++H r+H   
     bm01576   548    FPCTQ-CGKSFSDRaGLRKHSRTH    570  

SM00355: domain 16 of 16, from 576 to 598: score 31.2, E = 0.00014
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+Cp+ C+k f s+++L++H r+H   
     bm01576   576    YTCPH-CPKAFLSAsDLRKHERTH    598  

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