# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm01750.fasta.nr -Q bm01750.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm01750, 510 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6810099 sequences Expectation_n fit: rho(ln(x))= 6.5507+/-0.000199; mu= 6.1768+/- 0.011 mean_var=124.4399+/-24.574, 0's: 40 Z-trim: 86 B-trim: 445 in 1/65 Lambda= 0.114973 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089134|dbj|BAD93011.1| bruno-like 4, RNA bind ( 510) 3449 583.1 5.2e-164 gi|187761299|ref|NP_001020258.1| bruno-like 4, RNA ( 485) 3287 556.2 6.1e-156 gi|152013395|sp|Q5NVC8.2|CELF4_PONAB CUG-BP- and E ( 486) 3275 554.2 2.4e-155 gi|152013394|sp|Q7TSY6|CELF4_MOUSE CUG-BP- and ETR ( 486) 3268 553.1 5.5e-155 gi|148664597|gb|EDK97013.1| bruno-like 4, RNA bind ( 491) 3268 553.1 5.5e-155 gi|187761301|ref|NP_001020259.1| bruno-like 4, RNA ( 484) 3261 551.9 1.2e-154 gi|56403901|emb|CAI29735.1| hypothetical protein [ ( 486) 3253 550.6 3.1e-154 gi|30931371|gb|AAH52744.1| Bruno-like 4, RNA bindi ( 485) 3251 550.2 3.9e-154 gi|148664594|gb|EDK97010.1| bruno-like 4, RNA bind ( 485) 3242 548.8 1.1e-153 gi|22760138|dbj|BAC11082.1| unnamed protein produc ( 484) 3238 548.1 1.7e-153 gi|33872777|gb|AAH04167.2| Bruno-like 4, RNA bindi ( 484) 3219 544.9 1.5e-152 gi|26339326|dbj|BAC33334.1| unnamed protein produc ( 484) 3219 544.9 1.5e-152 gi|118103587|ref|XP_001231325.1| PREDICTED: simila ( 483) 3135 531.0 2.4e-148 gi|73961237|ref|XP_852916.1| PREDICTED: similar to ( 488) 3048 516.6 5.3e-144 gi|148664596|gb|EDK97012.1| bruno-like 4, RNA bind ( 510) 2971 503.8 3.8e-140 gi|29387384|gb|AAH48405.1| Brunol4 protein [Mus mu ( 504) 2954 501.0 2.7e-139 gi|148664595|gb|EDK97011.1| bruno-like 4, RNA bind ( 463) 2795 474.6 2.2e-131 gi|26341974|dbj|BAC34649.1| unnamed protein produc ( 456) 2790 473.8 3.8e-131 gi|55730138|emb|CAH91793.1| hypothetical protein [ ( 456) 2781 472.3 1.1e-130 gi|55732010|emb|CAH92712.1| hypothetical protein [ ( 457) 2743 466.0 8.5e-129 gi|148878073|gb|AAI46143.1| BRUNOL4 protein [Bos t ( 475) 2266 386.9 5.8e-105 gi|75075903|sp|Q4R535|CELF4_MACFA CUG-BP- and ETR- ( 474) 2255 385.0 2e-104 gi|73981450|ref|XP_862221.1| PREDICTED: similar to ( 447) 2241 382.7 9.8e-104 gi|73981452|ref|XP_862246.1| PREDICTED: similar to ( 440) 2239 382.4 1.2e-103 gi|126313734|ref|XP_001366807.1| PREDICTED: simila ( 436) 2222 379.5 8.5e-103 gi|149017097|gb|EDL76148.1| bruno-like 4, RNA bind ( 329) 2209 377.3 3.1e-102 gi|145306682|gb|ABP57105.1| CUG-BP and ETR-3-like ( 351) 2207 377.0 4.1e-102 gi|119621801|gb|EAX01396.1| bruno-like 4, RNA bind ( 328) 2199 375.6 9.7e-102 gi|109122035|ref|XP_001106276.1| PREDICTED: simila ( 479) 1994 341.7 2.2e-91 gi|27753638|gb|AAO22167.1| bruno-like 4 protein [M ( 495) 1994 341.8 2.3e-91 gi|148664598|gb|EDK97014.1| bruno-like 4, RNA bind ( 501) 1994 341.8 2.3e-91 gi|145306684|gb|ABP57106.1| CUG-BP and ETR-3-like ( 371) 1975 338.5 1.6e-90 gi|114672887|ref|XP_512100.2| PREDICTED: similar t ( 524) 1975 338.6 2.1e-90 gi|73981460|ref|XP_862351.1| PREDICTED: similar to ( 460) 1969 337.6 3.8e-90 gi|12642588|gb|AAK00298.1|AF314173_1 BRUL4 [Mus mu ( 298) 1951 334.4 2.2e-89 gi|126320814|ref|XP_001367310.1| PREDICTED: simila ( 421) 1953 334.9 2.2e-89 gi|118103583|ref|XP_424495.2| PREDICTED: similar t ( 492) 1953 335.0 2.5e-89 gi|123914769|sp|Q0V9L3|CELF4_XENTR CUG-BP- and ETR ( 424) 1920 329.4 1e-87 gi|73961233|ref|XP_866509.1| PREDICTED: similar to ( 334) 1908 327.4 3.3e-87 gi|73981448|ref|XP_862200.1| PREDICTED: similar to ( 411) 1801 309.7 8.6e-82 gi|28279033|gb|AAH45711.1| BRUNOL4 protein [Homo s ( 448) 1797 309.0 1.4e-81 gi|118103585|ref|XP_001231286.1| PREDICTED: simila ( 504) 1744 300.3 7e-79 gi|73981454|ref|XP_862276.1| PREDICTED: similar to ( 426) 1687 290.8 4.3e-76 gi|118095502|ref|XP_425051.2| PREDICTED: similar t ( 488) 1667 287.5 4.8e-75 gi|149638168|ref|XP_001508614.1| PREDICTED: simila ( 446) 1666 287.3 5e-75 gi|145306688|gb|ABP57108.1| CUG-BP and ETR-3-like ( 445) 1637 282.5 1.4e-73 gi|126272943|ref|XP_001371226.1| PREDICTED: simila ( 491) 1563 270.3 7.5e-70 gi|189531475|ref|XP_001334980.2| PREDICTED: simila ( 537) 1553 268.6 2.5e-69 gi|194214627|ref|XP_001916440.1| PREDICTED: simila ( 465) 1538 266.1 1.3e-68 gi|126313730|ref|XP_001366691.1| PREDICTED: simila ( 446) 1417 246.0 1.4e-62 >>gi|62089134|dbj|BAD93011.1| bruno-like 4, RNA binding (510 aa) initn: 3449 init1: 3449 opt: 3449 Z-score: 3099.7 bits: 583.1 E(): 5.2e-164 Smith-Waterman score: 3449; 100.000% identity (100.000% similar) in 510 aa overlap (1-510:1-510) 10 20 30 40 50 60 bm0175 ARASERERGARECERERIKGKKIFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ARASERERGARECERERIKGKKIFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG 10 20 30 40 50 60 70 80 90 100 110 120 bm0175 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK 70 80 90 100 110 120 130 140 150 160 170 180 bm0175 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF 130 140 150 160 170 180 190 200 210 220 230 240 bm0175 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS 190 200 210 220 230 240 250 260 270 280 290 300 bm0175 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQAMQQQAALM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQAMQQQAALM 250 260 270 280 290 300 310 320 330 340 350 360 bm0175 ASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPI 310 320 330 340 350 360 370 380 390 400 410 420 bm0175 GVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAY 370 380 390 400 410 420 430 440 450 460 470 480 bm0175 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQ 430 440 450 460 470 480 490 500 510 bm0175 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY :::::::::::::::::::::::::::::: gi|620 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 490 500 510 >>gi|187761299|ref|NP_001020258.1| bruno-like 4, RNA bin (485 aa) initn: 3287 init1: 3287 opt: 3287 Z-score: 2954.7 bits: 556.2 E(): 6.1e-156 Smith-Waterman score: 3287; 100.000% identity (100.000% similar) in 485 aa overlap (26-510:1-485) 10 20 30 40 50 60 bm0175 ARASERERGARECERERIKGKKIFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG ::::::::::::::::::::::::::::::::::: gi|187 MYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG 10 20 30 70 80 90 100 110 120 bm0175 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK 40 50 60 70 80 90 130 140 150 160 170 180 bm0175 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF 100 110 120 130 140 150 190 200 210 220 230 240 bm0175 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS 160 170 180 190 200 210 250 260 270 280 290 300 bm0175 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQAMQQQAALM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQAMQQQAALM 220 230 240 250 260 270 310 320 330 340 350 360 bm0175 ASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 ASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPI 280 290 300 310 320 330 370 380 390 400 410 420 bm0175 GVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 GVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAY 340 350 360 370 380 390 430 440 450 460 470 480 bm0175 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQ 400 410 420 430 440 450 490 500 510 bm0175 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY :::::::::::::::::::::::::::::: gi|187 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 460 470 480 >>gi|152013395|sp|Q5NVC8.2|CELF4_PONAB CUG-BP- and ETR-3 (486 aa) initn: 1830 init1: 1830 opt: 3275 Z-score: 2944.0 bits: 554.2 E(): 2.4e-155 Smith-Waterman score: 3275; 99.794% identity (99.794% similar) in 486 aa overlap (26-510:1-486) 10 20 30 40 50 60 bm0175 ARASERERGARECERERIKGKKIFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG ::::::::::::::::::::::::::::::::::: gi|152 MYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG 10 20 30 70 80 90 100 110 120 bm0175 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK 40 50 60 70 80 90 130 140 150 160 170 180 bm0175 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF 100 110 120 130 140 150 190 200 210 220 230 240 bm0175 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS 160 170 180 190 200 210 250 260 270 280 290 bm0175 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQA-MQQQAAL :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|152 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAAL 220 230 240 250 260 270 300 310 320 330 340 350 bm0175 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP 280 290 300 310 320 330 360 370 380 390 400 410 bm0175 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAA 340 350 360 370 380 390 420 430 440 450 460 470 bm0175 YGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 YGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASA 400 410 420 430 440 450 480 490 500 510 bm0175 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY ::::::::::::::::::::::::::::::: gi|152 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 460 470 480 >>gi|152013394|sp|Q7TSY6|CELF4_MOUSE CUG-BP- and ETR-3-l (486 aa) initn: 1830 init1: 1830 opt: 3268 Z-score: 2937.7 bits: 553.1 E(): 5.5e-155 Smith-Waterman score: 3268; 99.588% identity (99.794% similar) in 486 aa overlap (26-510:1-486) 10 20 30 40 50 60 bm0175 ARASERERGARECERERIKGKKIFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG ::::::::::::::::::::::::::::::::::: gi|152 MYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG 10 20 30 70 80 90 100 110 120 bm0175 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK 40 50 60 70 80 90 130 140 150 160 170 180 bm0175 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF 100 110 120 130 140 150 190 200 210 220 230 240 bm0175 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS 160 170 180 190 200 210 250 260 270 280 290 bm0175 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQA-MQQQAAL :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|152 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAAL 220 230 240 250 260 270 300 310 320 330 340 350 bm0175 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP 280 290 300 310 320 330 360 370 380 390 400 410 bm0175 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAA 340 350 360 370 380 390 420 430 440 450 460 470 bm0175 YGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASA ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|152 YGQISQAFPQPPPMIPQQQREGPEGCNLLIYHLPQEFGDAELMQMFLPFGFVSFDNPASA 400 410 420 430 440 450 480 490 500 510 bm0175 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY ::::::::::::::::::::::::::::::: gi|152 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 460 470 480 >>gi|148664597|gb|EDK97013.1| bruno-like 4, RNA binding (491 aa) initn: 2439 init1: 2439 opt: 3268 Z-score: 2937.6 bits: 553.1 E(): 5.5e-155 Smith-Waterman score: 3268; 98.778% identity (99.593% similar) in 491 aa overlap (21-510:2-491) 10 20 30 40 50 60 bm0175 ARASERERGARECERERIKGKKIFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG ...::::::::::::::::::::::::::::::::::::: gi|148 KERFFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG 10 20 30 40 70 80 90 100 110 120 bm0175 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK 50 60 70 80 90 100 130 140 150 160 170 180 bm0175 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF 110 120 130 140 150 160 190 200 210 220 230 240 bm0175 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS 170 180 190 200 210 220 250 260 270 280 290 bm0175 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQA-MQQQAAL :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|148 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAAL 230 240 250 260 270 280 300 310 320 330 340 350 bm0175 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP 290 300 310 320 330 340 360 370 380 390 400 410 bm0175 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|148 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPA-YPAA 350 360 370 380 390 400 420 430 440 450 460 470 bm0175 YGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASA ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|148 YGQISQAFPQPPPMIPQQQREGPEGCNLLIYHLPQEFGDAELMQMFLPFGFVSFDNPASA 410 420 430 440 450 460 480 490 500 510 bm0175 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY ::::::::::::::::::::::::::::::: gi|148 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 470 480 490 >>gi|187761301|ref|NP_001020259.1| bruno-like 4, RNA bin (484 aa) initn: 2275 init1: 2275 opt: 3261 Z-score: 2931.4 bits: 551.9 E(): 1.2e-154 Smith-Waterman score: 3261; 99.588% identity (99.794% similar) in 485 aa overlap (26-510:1-484) 10 20 30 40 50 60 bm0175 ARASERERGARECERERIKGKKIFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG ::::::::::::::::::::::::::::::::::: gi|187 MYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG 10 20 30 70 80 90 100 110 120 bm0175 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK 40 50 60 70 80 90 130 140 150 160 170 180 bm0175 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF ::::::::::::::::::::::::::::::::::::::::::::::::::::::. :::: gi|187 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSH-RKLF 100 110 120 130 140 150 190 200 210 220 230 240 bm0175 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS 160 170 180 190 200 210 250 260 270 280 290 300 bm0175 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQAMQQQAALM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQAMQQQAALM 220 230 240 250 260 270 310 320 330 340 350 360 bm0175 ASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 ASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPI 280 290 300 310 320 330 370 380 390 400 410 420 bm0175 GVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 GVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAY 340 350 360 370 380 390 430 440 450 460 470 480 bm0175 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQ 400 410 420 430 440 450 490 500 510 bm0175 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY :::::::::::::::::::::::::::::: gi|187 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 460 470 480 >>gi|56403901|emb|CAI29735.1| hypothetical protein [Pong (486 aa) initn: 1808 init1: 1808 opt: 3253 Z-score: 2924.2 bits: 550.6 E(): 3.1e-154 Smith-Waterman score: 3253; 99.177% identity (99.588% similar) in 486 aa overlap (26-510:1-486) 10 20 30 40 50 60 bm0175 ARASERERGARECERERIKGKKIFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG ::::::::::::::::::::::::::::::::::: gi|564 MYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG 10 20 30 70 80 90 100 110 120 bm0175 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK 40 50 60 70 80 90 130 140 150 160 170 180 bm0175 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF 100 110 120 130 140 150 190 200 210 220 230 240 bm0175 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|564 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAISALHGS 160 170 180 190 200 210 250 260 270 280 290 bm0175 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQA-MQQQAAL :::::::::::.:::::::::::::::::::::::::::::: ::::::::: ::::::: gi|564 QTMPGASSSLVAKFADTDKERTMRRMQQMAGQMGMFNPMAIPSGAYGAYAQALMQQQAAL 220 230 240 250 260 270 300 310 320 330 340 350 bm0175 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP 280 290 300 310 320 330 360 370 380 390 400 410 bm0175 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAA 340 350 360 370 380 390 420 430 440 450 460 470 bm0175 YGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 YGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASA 400 410 420 430 440 450 480 490 500 510 bm0175 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY ::::::::::::::::::::::::::::::: gi|564 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 460 470 480 >>gi|30931371|gb|AAH52744.1| Bruno-like 4, RNA binding p (485 aa) initn: 2422 init1: 2422 opt: 3251 Z-score: 2922.5 bits: 550.2 E(): 3.9e-154 Smith-Waterman score: 3251; 99.383% identity (99.588% similar) in 486 aa overlap (26-510:1-485) 10 20 30 40 50 60 bm0175 ARASERERGARECERERIKGKKIFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG ::::::::::::::::::::::::::::::::::: gi|309 MYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG 10 20 30 70 80 90 100 110 120 bm0175 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|309 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK 40 50 60 70 80 90 130 140 150 160 170 180 bm0175 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|309 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF 100 110 120 130 140 150 190 200 210 220 230 240 bm0175 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|309 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS 160 170 180 190 200 210 250 260 270 280 290 bm0175 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQA-MQQQAAL :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|309 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAAL 220 230 240 250 260 270 300 310 320 330 340 350 bm0175 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|309 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP 280 290 300 310 320 330 360 370 380 390 400 410 bm0175 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|309 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPA-YPAA 340 350 360 370 380 390 420 430 440 450 460 470 bm0175 YGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASA ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|309 YGQISQAFPQPPPMIPQQQREGPEGCNLLIYHLPQEFGDAELMQMFLPFGFVSFDNPASA 400 410 420 430 440 450 480 490 500 510 bm0175 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY ::::::::::::::::::::::::::::::: gi|309 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 460 470 480 >>gi|148664594|gb|EDK97010.1| bruno-like 4, RNA binding (485 aa) initn: 2407 init1: 2407 opt: 3242 Z-score: 2914.4 bits: 548.8 E(): 1.1e-153 Smith-Waterman score: 3242; 99.177% identity (99.588% similar) in 486 aa overlap (26-510:1-485) 10 20 30 40 50 60 bm0175 ARASERERGARECERERIKGKKIFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG ::::::::::::::::::::::::::::::::::: gi|148 MYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG 10 20 30 70 80 90 100 110 120 bm0175 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK 40 50 60 70 80 90 130 140 150 160 170 180 bm0175 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF ::::::::::::::::::::::::::::::::::::::::::::::::::::::. :::: gi|148 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSH-RKLF 100 110 120 130 140 150 190 200 210 220 230 240 bm0175 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS 160 170 180 190 200 210 250 260 270 280 290 bm0175 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQA-MQQQAAL :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|148 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAAL 220 230 240 250 260 270 300 310 320 330 340 350 bm0175 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSP 280 290 300 310 320 330 360 370 380 390 400 410 bm0175 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAA 340 350 360 370 380 390 420 430 440 450 460 470 bm0175 YGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASA ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|148 YGQISQAFPQPPPMIPQQQREGPEGCNLLIYHLPQEFGDAELMQMFLPFGFVSFDNPASA 400 410 420 430 440 450 480 490 500 510 bm0175 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY ::::::::::::::::::::::::::::::: gi|148 QTAIQAMNGFQIGMKRLKVQLKRPKDANRPY 460 470 480 >>gi|22760138|dbj|BAC11082.1| unnamed protein product [H (484 aa) initn: 2258 init1: 2258 opt: 3238 Z-score: 2910.8 bits: 548.1 E(): 1.7e-153 Smith-Waterman score: 3238; 98.763% identity (99.588% similar) in 485 aa overlap (26-510:1-484) 10 20 30 40 50 60 bm0175 ARASERERGARECERERIKGKKIFSMYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG ::::::::::::::::::::::::::::::::::: gi|227 MYIKMATLANGQADNASLSTNGLGSSPGSAGHMNG 10 20 30 70 80 90 100 110 120 bm0175 LSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|227 LSHSPGNPSTIPMKDHDAIKLFIGRIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHK 40 50 60 70 80 90 130 140 150 160 170 180 bm0175 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSQDRKLF ::::::::::::::::::::::::::::::::::::::::::::::::::::::. :::: gi|227 GCAFLTYCERESALKAQSALHEQKTLPGMNRPIQVKPADSESRGGSSCLRQPPSH-RKLF 100 110 120 130 140 150 190 200 210 220 230 240 bm0175 VGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGS ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::. gi|227 VGMLNKQQSEEDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGG 160 170 180 190 200 210 250 260 270 280 290 300 bm0175 QTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQAMQQQAALM ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|227 QTMPGASSSLVVKFADTDKERMMRRMQQMAGQMGMFNPMAIPFGAYGAYAQAMQQQAALM 220 230 240 250 260 270 310 320 330 340 350 360 bm0175 ASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|227 ASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPI 280 290 300 310 320 330 370 380 390 400 410 420 bm0175 GVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|227 GVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAY 340 350 360 370 380 390 430 440 450 460 470 480 bm0175 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|227 GQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQ 400 410 420 430 440 450 490 500 510 bm0175 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY :::::::::::::::::::::::::::::: gi|227 TAIQAMNGFQIGMKRLKVQLKRPKDANRPY 460 470 480 510 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 10:04:43 2008 done: Thu Aug 7 10:07:02 2008 Total Scan time: 881.580 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]