hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-10070319/chunk_1/iprscan-20080807-10070319.nocrc
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Query sequence: bm01750
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                 205.8    3.9e-57   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/3      80   156 ..     1   121 []    86.4  3.4e-21
SM00360    2/3     178   253 ..     1   121 []    82.8  4.2e-20
SM00360    3/3     446   499 ..     1   121 []    36.6  3.4e-06

Alignments of top-scoring domains:
SM00360: domain 1 of 3, from 80 to 156: score 86.4, E = 3.4e-21
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      +lf+g +  p + +e+dL+ lF              ++fGk+ +  +
     bm01750    80    KLFIGQI--PRNLDEKDLKPLF--------------EEFGKIYELTV 110  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   ++d+                      TG +kG+aF ++ ++e+A kA  +
     bm01750   111 LKDRF---------------------TGMHKGCAFLTYCERESALKA--Q 137  

                   ealnaskGkeledgGrptlglrVe<-*
                   +al+++k  +   ++rp   ++V+   
     bm01750   138 SALHEQKTLPG--MNRP---IQVK    156  

SM00360: domain 2 of 3, from 178 to 253: score 82.8, E = 4.2e-20
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      +lfVg L  +++ +e+d+r+lF              + fG+++++ i
     bm01750   178    KLFVGML--NKQQSEDDVRRLF--------------EAFGNIEECTI 208  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   +r +d                      G skG+aFV+++++++A++A  i
     bm01750   209 LRGPD----------------------GNSKGCAFVKYSSHAEAQAA--I 234  

                   ealnaskGkeledgGrptlglrVe<-*
                   +al++s  ++          l V+   
     bm01750   235 NALHGSQTMPG--ASSS---LVVK    253  

SM00360: domain 3 of 3, from 446 to 499: score 36.6, E = 3.4e-06
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      +lf+  L  p +  + +L ++F               +fG       
     bm01750   446    NLFIYHL--PQEFGDAELMQMF--------------LPFG------- 469  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                                                     FV F+++++A+ A  i
     bm01750   470 ----------------------------------FVSFDNPASAQTA--I 483  

                   ealnaskGkeledgGrptlglrVe<-*
                   +a+n   G+++  g ++   l+V+   
     bm01750   484 QAMN---GFQI--GMKR---LKVQ    499  

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