hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-10284350/chunk_1/iprscan-20080807-10284350.nocrc
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Query sequence: bm01867
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
TIGR02345    chap_CCT_eta: T-complex protein 1, eta s  1440.9          0   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
TIGR02345      1/1       6   528 ..     1   537 []  1440.9        0

Alignments of top-scoring domains:
TIGR02345: domain 1 of 1, from 6 to 528: score 1440.9, E = 0
                   *->rptivlLkegtDtSQGkgQliSNInACvaIaEiLktTLGPrGMDKLI
                      +++++lLkegtD+SQG++Ql+SNI+AC++IaE+++tTLGPrGMDKLI
     bm01867     6    PTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLI 52   

                   vgkngkatvSNDGATILklLDIVHPAAktLVDiAkSQDsEVGDGTTSVvv
                   v+++gkat+SNDGATILklLD+VHPAAktLVDiAkSQD+EVGDGTTSV++
     bm01867    53 VDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTL 102  

                   LAgelLkeaKpfiEeGvhpqlIircyreAlklAieklkEiavtidekePG
                   LA+e+Lk++Kp++EeG+hpq+Iir++r+A++lA++k+kEiavt+++++  
     bm01867   103 LAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKAD-- 150  

                   ntGfkgeqRevLekcAaTalsSKLIshekeFFskMiVDAVlqLdiddldl
                       k+eqR++LekcA+TalsSKLIs++k+FF+kM+VDAV++Ld d+l+l
     bm01867   151 ----KVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLD-DLLQL 195  

                   klIGvKkVqGGsleDSvlVnGVAFkKTFSYAGFEQQPKkfaNPkIllLNV
                   k+IG+KkVqGG+leDS+lV+GVAFkKTFSYAGFE+QPKk++NPkI+lLNV
     bm01867   196 KMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNV 245  

                   ELELKAEkdNAEIRVedvedYqaiVDAEWaIIfrKLekIveSGAnvVLSk
                   ELELKAEkdNAEIRV++vedYqaiVDAEW+I+++KLekI++SGA+vVLSk
     bm01867   246 ELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSK 295  

                   lpIGDlATQYFADhdIFCAGRVsdEDlkRvvkatGgsIlstvsdLeadvL
                   lpIGD+ATQYFAD+d+FCAGRV++EDlkR+++a+GgsI+++v++L+advL
     bm01867   296 LPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVL 345  

                   GtrCalFEErQiGseRYNlFtgcphaktCTiILRGGAeQfleEaERSlHD
                   G+ C++FEE+QiG+eRYN+Ftgcp+aktCT+ILRGGAeQf+eE+ERSlHD
     bm01867   346 GR-CQVFEETQIGGERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHD 394  

                   AImiVRRAlkakkiVaGGGAiEMelSkiLrehSkkidGKqQLiieAfAkA
                   AImiVRRA+k++++VaGGGAiEMelSk+Lr++S++i+GKqQL+i+A+AkA
     bm01867   395 AIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKA 444  

                   LEvIPrsLceNAGFDsieiLnkLRsrHakeikggsvkwyGVdIntedkig
                   LE+IPr+Lc+NAGFD+++iLnkLR+rHa+   gg  +wyGVdIn+ed i+
     bm01867   445 LEIIPRQLCDNAGFDATNILNKLRARHAQ---GG--TWYGVDINNED-IA 488  

                   DnfeafVWEPllVkkNALkAAfEAActILsiDeTIknpkS<-*
                   DnfeafVWEP++V++NAL+AA+EAAc+I+s+DeTIknp+S   
     bm01867   489 DNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRS    528  

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