hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-21074781/chunk_1/iprscan-20090617-21074781.nocrc
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Query sequence: bm01881
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00353                                                  52.6    5.2e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00353    1/1      55   107 ..     1    61 []    52.6  5.2e-11

Alignments of top-scoring domains:
SM00353: domain 1 of 1, from 55 to 107: score 52.6, E = 5.2e-11
                   *->narERrlrRRekiNeqafdeLrslvPtlpkgggnskKlsKasiLrlA
                      n++E+  +RR++++  ++++L+ l+P  p    ++++ + +  L +A
     bm01881    55    NELEK--NRRAHLRL-CLERLKVLIPLGP----DCTRHTTLGLLNKA 94   

                   ieYIrksLqeqlqe<-*
                     +I k+L+e++++   
     bm01881    95 KAHI-KKLEEAERK    107  

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