# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm01888.fasta.nr -Q bm01888.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm01888, 530 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8972572 sequences Expectation_n fit: rho(ln(x))= 6.0272+/-0.000185; mu= 8.3118+/- 0.010 mean_var=88.3397+/-17.653, 0's: 33 Z-trim: 120 B-trim: 0 in 0/67 Lambda= 0.136457 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|114549|sp|P06576.3|ATPB_HUMAN RecName: Full=ATP ( 529) 3376 674.5 2.3e-191 gi|114644226|ref|XP_509149.2| PREDICTED: ATP synth ( 529) 3343 668.0 2.1e-189 gi|109066521|ref|XP_001091520.1| PREDICTED: ATP sy ( 529) 3310 661.5 1.9e-187 gi|179279|gb|AAA51808.1| ATP synthase beta subunit ( 529) 3297 658.9 1.1e-186 gi|28940|emb|CAA27246.1| unnamed protein product [ ( 539) 3294 658.3 1.7e-186 gi|194037554|ref|XP_001929445.1| PREDICTED: simila ( 528) 3277 655.0 1.7e-185 gi|194212262|ref|XP_001917701.1| PREDICTED: mitoch ( 528) 3268 653.2 5.8e-185 gi|74197074|dbj|BAE35088.1| unnamed protein produc ( 529) 3262 652.0 1.3e-184 gi|23272966|gb|AAH37127.1| Atp5b protein [Mus musc ( 533) 3262 652.0 1.3e-184 gi|114543|sp|P00829.2|ATPB_BOVIN RecName: Full=ATP ( 528) 3261 651.8 1.5e-184 gi|20455479|sp|P56480.2|ATPB_MOUSE RecName: Full=A ( 529) 3257 651.0 2.6e-184 gi|74185232|dbj|BAE30095.1| unnamed protein produc ( 529) 3252 650.1 5.2e-184 gi|74204509|dbj|BAE35331.1| unnamed protein produc ( 529) 3252 650.1 5.2e-184 gi|74225421|dbj|BAE31630.1| unnamed protein produc ( 529) 3252 650.1 5.2e-184 gi|74220566|dbj|BAE31497.1| unnamed protein produc ( 529) 3251 649.9 5.9e-184 gi|74151565|dbj|BAE38888.1| unnamed protein produc ( 529) 3251 649.9 5.9e-184 gi|74198645|dbj|BAE39797.1| unnamed protein produc ( 529) 3251 649.9 5.9e-184 gi|74139650|dbj|BAE40961.1| unnamed protein produc ( 529) 3248 649.3 8.9e-184 gi|149029718|gb|EDL84889.1| ATP synthase, H+ trans ( 529) 3242 648.1 2e-183 gi|114562|sp|P10719.2|ATPB_RAT RecName: Full=ATP s ( 529) 3236 646.9 4.6e-183 gi|2623222|gb|AAB86421.1| ATP synthase beta-subuni ( 529) 3227 645.1 1.6e-182 gi|73968432|ref|XP_531639.2| PREDICTED: similar to ( 527) 3226 644.9 1.8e-182 gi|73968434|ref|XP_857891.1| PREDICTED: similar to ( 527) 3206 641.0 2.7e-181 gi|126343750|ref|XP_001364069.1| PREDICTED: simila ( 525) 3174 634.7 2.2e-179 gi|82082513|sp|Q5ZLC5.1|ATPB_CHICK RecName: Full=A ( 533) 3067 613.6 4.8e-173 gi|28436792|gb|AAH46741.1| Atp5b protein [Xenopus ( 525) 3048 609.9 6.3e-172 gi|1827812|pdb|1COW|D Chain D, Bovine Mitochondria ( 482) 3040 608.3 1.8e-171 gi|45767611|gb|AAH67388.1| ATP synthase, H+ transp ( 525) 3034 607.1 4.3e-171 gi|11514059|pdb|1E79|D Chain D, Bovine F1-Atpase I ( 482) 3033 606.9 4.6e-171 gi|3660251|pdb|1NBM|D Chain D, The Structure Of Bo ( 480) 3025 605.3 1.4e-170 gi|3660252|pdb|1NBM|E Chain E, The Structure Of Bo ( 480) 3016 603.6 4.6e-170 gi|6729935|pdb|1MAB|B Chain B, Rat Liver F1-Atpase ( 479) 3014 603.2 6.1e-170 gi|1374715|gb|AAB02288.1| ATP synthase beta subuni ( 475) 2980 596.5 6.2e-168 gi|47605558|sp|Q9PTY0.1|ATPB_CYPCA RecName: Full=A ( 518) 2939 588.4 1.8e-165 gi|159155102|gb|AAI54660.1| Zgc:111961 [Danio reri ( 517) 2935 587.6 3.1e-165 gi|226441961|gb|ACO57570.1| F1 ATP synthase beta s ( 505) 2921 584.9 2.1e-164 gi|226441959|gb|ACO57569.1| F1 ATP synthase beta s ( 505) 2918 584.3 3.1e-164 gi|47218629|emb|CAG04958.1| unnamed protein produc ( 517) 2918 584.3 3.2e-164 gi|66267496|gb|AAH95620.1| Zgc:111961 [Danio rerio ( 517) 2917 584.1 3.6e-164 gi|89574029|gb|ABD77240.1| mitochondrial ATP synth ( 445) 2846 570.1 5.2e-160 gi|198285477|gb|ACH85277.1| ATP synthase H+ transp ( 495) 2837 568.3 1.9e-159 gi|89574015|gb|ABD77233.1| mitochondrial ATP synth ( 445) 2823 565.6 1.2e-158 gi|110762902|ref|XP_624156.2| PREDICTED: similar t ( 516) 2812 563.4 6e-158 gi|133778774|gb|AAI34216.1| Zgc:163069 protein [Da ( 524) 2801 561.3 2.7e-157 gi|193892039|gb|EDV90905.1| GH23965 [Drosophila gr ( 506) 2792 559.5 9.1e-157 gi|190618410|gb|EDV33934.1| GF21882 [Drosophila an ( 506) 2790 559.1 1.2e-156 gi|54640128|gb|EAL29273.1| ATPsyn-beta [Drosophila ( 506) 2785 558.1 2.4e-156 gi|209915626|ref|NP_001119645.2| ATP synthase-beta ( 521) 2784 557.9 2.8e-156 gi|95102938|gb|ABF51410.1| H+ transporting ATP syn ( 516) 2781 557.3 4.1e-156 gi|194168680|gb|EDW83581.1| GK13685 [Drosophila wi ( 506) 2780 557.1 4.7e-156 >>gi|114549|sp|P06576.3|ATPB_HUMAN RecName: Full=ATP syn (529 aa) initn: 3376 init1: 3376 opt: 3376 Z-score: 3592.8 bits: 674.5 E(): 2.3e-191 Smith-Waterman score: 3376; 100.000% identity (100.000% similar) in 529 aa overlap (2-530:1-529) 10 20 30 40 50 60 bm0188 AMLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAA 10 20 30 40 50 70 80 90 100 110 120 bm0188 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL 60 70 80 90 100 110 130 140 150 160 170 180 bm0188 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVE 120 130 140 150 160 170 190 200 210 220 230 240 bm0188 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 180 190 200 210 220 230 250 260 270 280 290 300 bm0188 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 240 250 260 270 280 290 310 320 330 340 350 360 bm0188 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA 300 310 320 330 340 350 370 380 390 400 410 420 bm0188 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD 360 370 380 390 400 410 430 440 450 460 470 480 bm0188 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG 420 430 440 450 460 470 490 500 510 520 530 bm0188 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS :::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS 480 490 500 510 520 >>gi|114644226|ref|XP_509149.2| PREDICTED: ATP synthase, (529 aa) initn: 3343 init1: 3343 opt: 3343 Z-score: 3557.7 bits: 668.0 E(): 2.1e-189 Smith-Waterman score: 3343; 99.244% identity (99.622% similar) in 529 aa overlap (2-530:1-529) 10 20 30 40 50 60 bm0188 AMLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAA :::.:::::.: :::::: :::::::::::::::::::::::::::::::::::::::: gi|114 MLGLVGRVAVASASGALRGLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAA 10 20 30 40 50 70 80 90 100 110 120 bm0188 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL 60 70 80 90 100 110 130 140 150 160 170 180 bm0188 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVE 120 130 140 150 160 170 190 200 210 220 230 240 bm0188 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 180 190 200 210 220 230 250 260 270 280 290 300 bm0188 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 240 250 260 270 280 290 310 320 330 340 350 360 bm0188 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA 300 310 320 330 340 350 370 380 390 400 410 420 bm0188 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD 360 370 380 390 400 410 430 440 450 460 470 480 bm0188 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG 420 430 440 450 460 470 490 500 510 520 530 bm0188 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS :::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS 480 490 500 510 520 >>gi|109066521|ref|XP_001091520.1| PREDICTED: ATP syntha (529 aa) initn: 3372 init1: 3310 opt: 3310 Z-score: 3522.6 bits: 661.5 E(): 1.9e-187 Smith-Waterman score: 3310; 98.299% identity (99.244% similar) in 529 aa overlap (2-530:1-529) 10 20 30 40 50 60 bm0188 AMLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAA :::.:: ::.: :::::: :::::::::::::::::::::::::::::::::::::::: gi|109 MLGLVGSVATASASGALRGLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAA 10 20 30 40 50 70 80 90 100 110 120 bm0188 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL 60 70 80 90 100 110 130 140 150 160 170 180 bm0188 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVE ::::::::::::::::::::::::::::::::.:::::::::::: :::::::::::::: gi|109 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPFDERGPIKTKQFAAIHAEAPEFMEMSVE 120 130 140 150 160 170 190 200 210 220 230 240 bm0188 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 180 190 200 210 220 230 250 260 270 280 290 300 bm0188 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 240 250 260 270 280 290 310 320 330 340 350 360 bm0188 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|109 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLTTDMGTMQERITTTKKGSITSVQA 300 310 320 330 340 350 370 380 390 400 410 420 bm0188 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD 360 370 380 390 400 410 430 440 450 460 470 480 bm0188 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG 420 430 440 450 460 470 490 500 510 520 530 bm0188 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS ::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHAS 480 490 500 510 520 >>gi|179279|gb|AAA51808.1| ATP synthase beta subunit [Ho (529 aa) initn: 3297 init1: 3297 opt: 3297 Z-score: 3508.8 bits: 658.9 E(): 1.1e-186 Smith-Waterman score: 3297; 97.921% identity (98.677% similar) in 529 aa overlap (2-530:1-529) 10 20 30 40 50 60 bm0188 AMLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAA :::::::::::::::::::::::::::::::::::. ::::::::::::::::::: gi|179 MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAVRRRFHPVRDYAAQTSPSPKAGAA 10 20 30 40 50 70 80 90 100 110 120 bm0188 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL 60 70 80 90 100 110 130 140 150 160 170 180 bm0188 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVE :::::::::: .::::::::::::::::::::::::::::::::::::::::::::::: gi|179 VRGQKVLDSGDQLKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVE 120 130 140 150 160 170 190 200 210 220 230 240 bm0188 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 180 190 200 210 220 230 250 260 270 280 290 300 bm0188 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|179 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNQPPGARARVALTGLTVAEYFRDQEGQ 240 250 260 270 280 290 310 320 330 340 350 360 bm0188 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA 300 310 320 330 340 350 370 380 390 400 410 420 bm0188 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|179 IYVPADDLTDPAPATTFADLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD 360 370 380 390 400 410 430 440 450 460 470 480 bm0188 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|179 VARGVQKILQDYKSLHDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG 420 430 440 450 460 470 490 500 510 520 530 bm0188 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS :::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS 480 490 500 510 520 >>gi|28940|emb|CAA27246.1| unnamed protein product [Homo (539 aa) initn: 3293 init1: 3293 opt: 3294 Z-score: 3505.5 bits: 658.3 E(): 1.7e-186 Smith-Waterman score: 3294; 98.479% identity (98.859% similar) in 526 aa overlap (5-530:14-539) 10 20 30 40 50 bm0188 AMLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQT : :::::::::::::::::::::::::::::. :::::::::: gi|289 MTSLWGKGTGCKLFKFRVAAAPASGALRRLTPSASLPPAQLLLRAVRRRSHPVRDYAAQT 10 20 30 40 50 60 60 70 80 90 100 110 bm0188 SPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|289 SPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRT 70 80 90 100 110 120 120 130 140 150 160 170 bm0188 IAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|289 IAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEA 130 140 150 160 170 180 180 190 200 210 220 230 bm0188 PEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|289 PEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGY 190 200 210 220 230 240 240 250 260 270 280 290 bm0188 SVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVA :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|289 SVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNQPPGARARVALTGLTVA 250 260 270 280 290 300 300 310 320 330 340 350 bm0188 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|289 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK 310 320 330 340 350 360 360 370 380 390 400 410 bm0188 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|289 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDP 370 380 390 400 410 420 420 430 440 450 460 470 bm0188 NIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|289 NIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQV 430 440 450 460 470 480 480 490 500 510 520 530 bm0188 AEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|289 AEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS 490 500 510 520 530 >>gi|194037554|ref|XP_001929445.1| PREDICTED: similar to (528 aa) initn: 3277 init1: 3277 opt: 3277 Z-score: 3487.5 bits: 655.0 E(): 1.7e-185 Smith-Waterman score: 3277; 97.348% identity (98.864% similar) in 528 aa overlap (2-529:1-528) 10 20 30 40 50 60 bm0188 AMLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAA :::::::::.: :::::: :.::: :: :::::::::.:..:.::::.: ::::::::: gi|194 MLGFVGRVASASASGALRGLSPSAPLPQAQLLLRAAPAALQPARDYATQPSPSPKAGAA 10 20 30 40 50 70 80 90 100 110 120 bm0188 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL 60 70 80 90 100 110 130 140 150 160 170 180 bm0188 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVE ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|194 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFMEMSVE 120 130 140 150 160 170 190 200 210 220 230 240 bm0188 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 180 190 200 210 220 230 250 260 270 280 290 300 bm0188 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 240 250 260 270 280 290 310 320 330 340 350 360 bm0188 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA 300 310 320 330 340 350 370 380 390 400 410 420 bm0188 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD 360 370 380 390 400 410 430 440 450 460 470 480 bm0188 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|194 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLG 420 430 440 450 460 470 490 500 510 520 530 bm0188 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS ::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHS 480 490 500 510 520 >>gi|194212262|ref|XP_001917701.1| PREDICTED: mitochondr (528 aa) initn: 3268 init1: 3268 opt: 3268 Z-score: 3478.0 bits: 653.2 E(): 5.8e-185 Smith-Waterman score: 3268; 96.970% identity (99.053% similar) in 528 aa overlap (2-529:1-528) 10 20 30 40 50 60 bm0188 AMLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAA :::.::::::: :::::: :.::: :: :::::::::.:..:.:::::::::.:::::: gi|194 MLGLVGRVAAASASGALRGLSPSAPLPQAQLLLRAAPAALQPARDYAAQTSPAPKAGAA 10 20 30 40 50 70 80 90 100 110 120 bm0188 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL 60 70 80 90 100 110 130 140 150 160 170 180 bm0188 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVE ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|194 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFMEMSVE 120 130 140 150 160 170 190 200 210 220 230 240 bm0188 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 180 190 200 210 220 230 250 260 270 280 290 300 bm0188 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 240 250 260 270 280 290 310 320 330 340 350 360 bm0188 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA 300 310 320 330 340 350 370 380 390 400 410 420 bm0188 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::. gi|194 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYE 360 370 380 390 400 410 430 440 450 460 470 480 bm0188 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|194 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLG 420 430 440 450 460 470 490 500 510 520 530 bm0188 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS ::::::::::::::::::.:::::::::::::::::::::::::::::: gi|194 KLVPLKETIKGFQQILAGDYDHLPEQAFYMVGPIEEAVAKADKLAEEHS 480 490 500 510 520 >>gi|74197074|dbj|BAE35088.1| unnamed protein product [M (529 aa) initn: 3324 init1: 3262 opt: 3262 Z-score: 3471.6 bits: 652.0 E(): 1.3e-184 Smith-Waterman score: 3262; 96.408% identity (99.244% similar) in 529 aa overlap (2-530:1-529) 10 20 30 40 50 60 bm0188 AMLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAA ::..:::::.: :::::: :.:::.:: :::::::::..::::::::::.: .::::.: gi|741 MLSLVGRVASASASGALRGLSPSAALPQAQLLLRAAPAGVHPVRDYAAQASAAPKAGTA 10 20 30 40 50 70 80 90 100 110 120 bm0188 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL ::::::::::::::::::::::::::::::::..:::::::::::::::::::::::::: gi|741 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTEGL 60 70 80 90 100 110 130 140 150 160 170 180 bm0188 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVE ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|741 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVE 120 130 140 150 160 170 190 200 210 220 230 240 bm0188 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 180 190 200 210 220 230 250 260 270 280 290 300 bm0188 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 240 250 260 270 280 290 310 320 330 340 350 360 bm0188 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA 300 310 320 330 340 350 370 380 390 400 410 420 bm0188 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|741 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYD 360 370 380 390 400 410 430 440 450 460 470 480 bm0188 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG 420 430 440 450 460 470 490 500 510 520 530 bm0188 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS ::::::::::::::::::::::::::::::::::::::::::::::::.: gi|741 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHGS 480 490 500 510 520 >>gi|23272966|gb|AAH37127.1| Atp5b protein [Mus musculus (533 aa) initn: 3324 init1: 3262 opt: 3262 Z-score: 3471.5 bits: 652.0 E(): 1.3e-184 Smith-Waterman score: 3262; 96.226% identity (99.245% similar) in 530 aa overlap (1-530:4-533) 10 20 30 40 50 bm0188 AMLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKA :::..:::::.: :::::: :.:::.:: :::::::::..:::.::::::.: .::: gi|232 HASAMLSLVGRVASASASGALRGLSPSAALPQAQLLLRAAPAGVHPARDYAAQASAAPKA 10 20 30 40 50 60 60 70 80 90 100 110 bm0188 GAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGT :.:::::::::::::::::::::::::::::::::..::::::::::::::::::::::: gi|232 GTATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGT 70 80 90 100 110 120 120 130 140 150 160 170 bm0188 EGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|232 EGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEM 130 140 150 160 170 180 180 190 200 210 220 230 bm0188 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|232 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 190 200 210 220 230 240 240 250 260 270 280 290 bm0188 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|232 GERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQ 250 260 270 280 290 300 300 310 320 330 340 350 bm0188 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|232 EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITS 310 320 330 340 350 360 360 370 380 390 400 410 bm0188 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|232 VQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNE 370 380 390 400 410 420 420 430 440 450 460 470 bm0188 HYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|232 HYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTG 430 440 450 460 470 480 480 490 500 510 520 530 bm0188 HMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS :::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|232 HMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHGS 490 500 510 520 530 >>gi|114543|sp|P00829.2|ATPB_BOVIN RecName: Full=ATP syn (528 aa) initn: 3261 init1: 3261 opt: 3261 Z-score: 3470.5 bits: 651.8 E(): 1.5e-184 Smith-Waterman score: 3261; 96.780% identity (99.053% similar) in 528 aa overlap (2-529:1-528) 10 20 30 40 50 60 bm0188 AMLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAA :::.::::.:: :::::: :.::: :: :::::::::.:..:.::::::.::::::::. gi|114 MLGLVGRVVAASASGALRGLSPSAPLPQAQLLLRAAPAALQPARDYAAQASPSPKAGAT 10 20 30 40 50 70 80 90 100 110 120 bm0188 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGL 60 70 80 90 100 110 130 140 150 160 170 180 bm0188 VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVE :::::::::::::.::::::::::::::::::::::::::::::: ::::::::.::::: gi|114 VRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSVE 120 130 140 150 160 170 190 200 210 220 230 240 bm0188 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 180 190 200 210 220 230 250 260 270 280 290 300 bm0188 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 240 250 260 270 280 290 310 320 330 340 350 360 bm0188 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA 300 310 320 330 340 350 370 380 390 400 410 420 bm0188 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYD 360 370 380 390 400 410 430 440 450 460 470 480 bm0188 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|114 VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHLG 420 430 440 450 460 470 490 500 510 520 530 bm0188 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHSS ::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAKADKLAEEHS 480 490 500 510 520 530 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Wed Jun 17 21:10:55 2009 done: Wed Jun 17 21:14:00 2009 Total Scan time: 1192.310 Total Display time: 0.180 Function used was FASTA [version 34.26.5 April 26, 2007]