hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20090416/iprscan-20090416-11033114/chunk_1/iprscan-20090416-11033114.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: bm01941
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
TIGR01513    NAPRTase_put: putative nicotinate phosph   902.9   4.6e-269   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
TIGR01513      1/1      18   493 .]     1   523 []   902.9 4.6e-269

Alignments of top-scoring domains:
TIGR01513: domain 1 of 1, from 18 to 493: score 902.9, E = 4.6e-269
                   *->aLlTDLYElTMaQgYfkegiankkAvFEvFFRklPfkrgYavfAGLe
                      +LlTDLY++TMa gY+++g+a+++A+FE+FFR++Pf++++a++AGL+
     bm01941    18    PLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGLR 64   

                   dllefLenfRFddeDieYLasLLPGiFddeFLdyLreFrFs.gdVrAlpE
                   d+++fL++fR++d+D+++Las+LP+++d++F+++Lr++++s+++VrAlpE
     bm01941    65 DCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSeVTVRALPE 114  

                   GsvvFPnePllqVegpLiEaQLlETlvLNiinfqtLiATKAARivlAAgg
                   Gs++FP++PllqV+gpL+++QLlET++L+++++++L+AT+AAR++l+Ag+
     bm01941   115 GSLAFPGVPLLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGP 164  

                   kpGrLlEFGlRRAQGmdAAlkAaRAAYIGGAdgTSNvlAGrlyGIPVsGT
                   ++ rLlE+GlRRAQG+d++l+A++++Y+GG+d++SNvlAG+l+G+PV+GT
     bm01941   165 EK-RLLEMGLRRAQGPDGGLTASTYSYLGGFDSSSNVLAGQLRGVPVAGT 213  

                   mAHafVqsFdqsegPtelm...................WLEqvCAHLGLG
                   +AH+fV+sF++se+P+++m  +  +++++ +   + + WLEqvCAHLGLG
     bm01941   214 LAHSFVTSFSGSEVPPDPMlapaagegpgvdlaakaqvWLEQVCAHLGLG 263  

                   vqEPHPsEleAFrAYAklYPkntvlLvDTYDTLrSGlpnAiavakeLGeq
                   vqEPHP+E++AF+AYA ++P+++++L+DTY+++rSGlpn++ava +LGe 
     bm01941   264 VQEPHPGERAAFVAYALAFPRAFQGLLDTYSVWRSGLPNFLAVALALGEL 313  

                   gkevvGVRiDSGDLayLSkkvRkeLDeAGAqFqvPWLeevkIvVSNdLDE
                   g+++vGVR+DSGDL+++++++Rk++++A+AqFqvPWLe+v IvVSN++DE
     bm01941   314 GYRAVGVRLDSGDLLQQAQEIRKVFRAAAAQFQVPWLESVLIVVSNNIDE 363  

                   nsIaaLkaegAPIDvyGVGTsLvTasdaPGGalsgVYKLvayegtqPAHt
                   +++a+L++eg++++v+G+GTs+vT++++P  +l+gVYKLva++g      
     bm01941   364 EALARLAQEGSEVNVIGIGTSVVTCPQQP--SLGGVYKLVAVGG------ 405  

                   qHGHAAqRLPHWedGkirPkmKlSeNpeKstlPGkKqVfRlydkatGkfl
                                    +P+mKl+e+peK+tlPG+K++fRl++ ++G++l
     bm01941   406 -----------------QPRMKLTEDPEKQTLPGSKAAFRLLG-SDGSPL 437  

                   gDvitladepvikdgeelRvfhPtnaeikktvravdqvePLlelVmknGk
                   +D+++la+epv+++g+elRv++P+ a++++tvr+ +qvePLl+l++++G+
     bm01941   438 MDMLQLAEEPVPQAGQELRVWPPG-AQEPCTVRP-AQVEPLLRLCLQQGQ 485  

                   RllvkpapSLaeiRdrareqLskLppeykrLlnpshvYpVslsprl<-*
                     +++                           +p         p     
     bm01941   486 --VAA---------------------------PP---------PSS    493  

//