hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-21202688/chunk_1/iprscan-20090617-21202688.nocrc
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Query sequence: bm01942
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00291.15.ls Pyridoxal-phosphate dependent enzyme           239.9    4.9e-69   1
PF00291.15.fs Pyridoxal-phosphate dependent enzyme           238.2    1.7e-68   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00291.15.fs   1/1      23   317 ..     1   376 []   238.2  1.7e-68
PF00291.15.ls   1/1      23   317 ..     1   376 []   239.9  4.9e-69

Alignments of top-scoring domains:
PF00291.15.fs: domain 1 of 1, from 23 to 317: score 238.2, E = 1.7e-68
                   *->vtelignTPLvrlnrlskelgkglganaaaeiylKlEdlnGPtGSfK
                       + l  +TP   +  ls    k  g+     +ylK ++ + P+GSfK
     bm01942    23    GEPLHVKTPIRDSMALS----KMAGT----SVYLKMDSAQ-PSGSFK 60   

                   dRglalnmillAeklgkkggiapsvvqfeskttiiEptsGNtGialAlaa
                   +Rg + + ++   k+g+++ ++ s              +GN+G a+A+aa
     bm01942    61 IRG-IGHFCKRWAKQGCAHFVCSS--------------AGNAGMAAAYAA 95   

                   allGlkciivMPatdtsrekraqlralGaeaivvpvvgGgsddladavak
                   ++lG++++iv+P+t t+   ++ l+ +Ga   +v vvg    d  +a + 
     bm01942    96 RQLGVPATIVVPST-TPALTIERLKNEGA---TVKVVG-ELLD--EAFEL 138  

                   AeelaeenpentayllnqaaGpfdnPanveIagqktigpEIleQlggkei
                   A+ la++np + ++++++    fd+P ++e  g+  i +E++e l +k  
     bm01942   139 AKALAKNNP-G-WVYIPP----FDDPLIWE--GHASIVKELKETLWEK-- 178  

                   sigrlpDavvapvGgGGtiaGiarylKellpdgkiDvvekpvkvigVEpe
                        p a+ ++vGgGG+++G+ ++l e  ++   D     v vi+ E+ 
     bm01942   179 -----PGAIALSVGGGGLLCGVVQGLQEVGWG---D-----VPVIAMETF 215  

                   gsavlsgslkatltlagkpGplhgrdskyllQDepvtlpetksigiGlgv
                   g+++++++          +G+              v lp+++s +  lgv
     bm01942   216 GAHSFHAATT--------AGK-------------LVSLPKITSVAKALGV 244  

                   prvgefvppildellvgrdevvtvtdeealeaarrLareEGilvgpssaa
                   ++vg+ + + ++e      + ++++d+ea++a+   +++E+ilv+p+++a
     bm01942   245 KTVGAQALKLFQEHP---IFSEVISDQEAVAAIEKFVDDEKILVEPACGA 291  

                   avAaalklakegkepegkgkriVvilsgg<-*
                   a+Aa+++ + +   ++  +++  + l++    
     bm01942   292 ALAAVYSHVIQ---KLQLEGNLRTPLPSL    317  

PF00291.15.ls: domain 1 of 1, from 23 to 317: score 239.9, E = 4.9e-69
                   *->vtelignTPLvrlnrlskelgkglganaaaeiylKlEdlnGPtGSfK
                       + l  +TP   +  ls    k  g+     +ylK ++ + P+GSfK
     bm01942    23    GEPLHVKTPIRDSMALS----KMAGT----SVYLKMDSAQ-PSGSFK 60   

                   dRglalnmillAeklgkkggiapsvvqfeskttiiEptsGNtGialAlaa
                   +Rg + + ++   k+g+++ ++ s              +GN+G a+A+aa
     bm01942    61 IRG-IGHFCKRWAKQGCAHFVCSS--------------AGNAGMAAAYAA 95   

                   allGlkciivMPatdtsrekraqlralGaeaivvpvvgGgsddladavak
                   ++lG++++iv+P+t t+   ++ l+ +Ga   +v vvg    d  +a + 
     bm01942    96 RQLGVPATIVVPST-TPALTIERLKNEGA---TVKVVG-ELLD--EAFEL 138  

                   AeelaeenpentayllnqaaGpfdnPanveIagqktigpEIleQlggkei
                   A+ la++np + ++++++    fd+P ++e  g+  i +E++e l +k  
     bm01942   139 AKALAKNNP-G-WVYIPP----FDDPLIWE--GHASIVKELKETLWEK-- 178  

                   sigrlpDavvapvGgGGtiaGiarylKellpdgkiDvvekpvkvigVEpe
                        p a+ ++vGgGG+++G+ ++l e  ++   D     v vi+ E+ 
     bm01942   179 -----PGAIALSVGGGGLLCGVVQGLQEVGWG---D-----VPVIAMETF 215  

                   gsavlsgslkatltlagkpGplhgrdskyllQDepvtlpetksigiGlgv
                   g+++++++          +G+              v lp+++s +  lgv
     bm01942   216 GAHSFHAATT--------AGK-------------LVSLPKITSVAKALGV 244  

                   prvgefvppildellvgrdevvtvtdeealeaarrLareEGilvgpssaa
                   ++vg+ + + ++e      + ++++d+ea++a+   +++E+ilv+p+++a
     bm01942   245 KTVGAQALKLFQEHP---IFSEVISDQEAVAAIEKFVDDEKILVEPACGA 291  

                   avAaalklakegkepegkgkriVvilsgg<-*
                   a+Aa+++ + +   ++  +++  + l++    
     bm01942   292 ALAAVYSHVIQ---KLQLEGNLRTPLPSL    317  

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