hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-11133882/chunk_1/iprscan-20080807-11133882.nocrc
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Query sequence: bm02070
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07763.3.fs FEZ-like protein                               485.7   1.3e-147   1
PF07763.3.ls FEZ-like protein                               484.4   1.2e-142   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07763.3.fs   1/1       1   237 [.     8   273 .]   485.7 1.3e-147
PF07763.3.ls   1/1       1   237 [.     1   273 []   484.4 1.2e-142

Alignments of top-scoring domains:
PF07763.3.fs: domain 1 of 1, from 1 to 237: score 485.7, E = 1.3e-147
                   *->eFDEKlnvCFrnyesktEeLAPVrvrsqaeeeEEvLneeqvWwaLTd
                      +++EKl++CFr+ +  +E   P+r ++++++e ++L+++++W+aLTd
     bm02070     1    SLEEKLSLCFRPSDPGAE---PPRTAVRPITERSLLQGDEIWNALTD 44   

                   NygNilpvDWkdssirtlhgnaldleihkddastddeLlqDesdEdeelr
                   NygN++pvDWk+s++rtlh+++l+l+++    +  d+Ll+D sd + elr
     bm02070    45 NYGNVMPVDWKSSHTRTLHLLTLNLSEK----GVSDSLLFDTSDDE-ELR 89   

                   eqlDmhslIGhhlGsvdadNEePllTADQVIEEIdEMMqeSPDpgseete
                   eqlDmhs+I      v+++N ePl+TADQVIEEI+EMMqeSPDp+++et+
     bm02070    90 EQLDMHSII------VSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETP 133  

                   leeEdigkasSslrSpLlqeIqssDaDikLkqaqnlnsyeEgLreLSvSe
                           ++S+++S+L+qeIq      +Lk++ +  syeE++++LSvSe
     bm02070   134 --------TQSDRLSMLSQEIQ------TLKRS-STGSYEERVKRLSVSE 168  

                   LneLleemEaaIReYSEeLVsqLAlRDELEfEKEvKNsFISlLleVQNkq
                   Lne+lee+E aI+eYSEeLV+qLAlRDELEfEKEvKNsFIS+L+eVQNkq
     bm02070   169 LNEILEEIETAIKEYSEELVQQLALRDELEFEKEVKNSFISVLIEVQNKQ 218  

                   keyreleKkKrKkkskssQ<-*
                   ke++e++KkK+K+k +ssQ   
     bm02070   219 KEHKETAKKKKKLKNGSSQ    237  

PF07763.3.ls: domain 1 of 1, from 1 to 237: score 484.4, E = 1.2e-142
                   *->SlEDLVneFDEKlnvCFrnyesktEeLAPVrvrsqaeeeEEvLneeq
                             +++EKl++CFr+ +  +E   P+r ++++++e ++L++++
     bm02070     1    -------SLEEKLSLCFRPSDPGAE---PPRTAVRPITERSLLQGDE 37   

                   vWwaLTdNygNilpvDWkdssirtlhgnaldleihkddastddeLlqDes
                   +W+aLTdNygN++pvDWk+s++rtlh+++l+l+++    +  d+Ll+D s
     bm02070    38 IWNALTDNYGNVMPVDWKSSHTRTLHLLTLNLSEK----GVSDSLLFDTS 83   

                   dEdeelreqlDmhslIGhhlGsvdadNEePllTADQVIEEIdEMMqeSPD
                   d + elreqlDmhs+I      v+++N ePl+TADQVIEEI+EMMqeSPD
     bm02070    84 DDE-ELREQLDMHSII------VSCVNDEPLFTADQVIEEIEEMMQESPD 126  

                   pgseeteleeEdigkasSslrSpLlqeIqssDaDikLkqaqnlnsyeEgL
                   p+++et+        ++S+++S+L+qeIq      +Lk++ +  syeE++
     bm02070   127 PEDDETP--------TQSDRLSMLSQEIQ------TLKRS-STGSYEERV 161  

                   reLSvSeLneLleemEaaIReYSEeLVsqLAlRDELEfEKEvKNsFISlL
                   ++LSvSeLne+lee+E aI+eYSEeLV+qLAlRDELEfEKEvKNsFIS+L
     bm02070   162 KRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEKEVKNSFISVL 211  

                   leVQNkqkeyreleKkKrKkkskssQ<-*
                   +eVQNkqke++e++KkK+K+k +ssQ   
     bm02070   212 IEVQNKQKEHKETAKKKKKLKNGSSQ    237  

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