hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-21470919/chunk_1/iprscan-20090617-21470919.nocrc
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Query sequence: bm02123
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02146.8.ls Sir2 family                                    375.3   8.8e-110   1
PF02146.8.fs Sir2 family                                    373.4   3.2e-109   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02146.8.fs   1/1      91   275 ..     1   213 []   373.4 3.2e-109
PF02146.8.ls   1/1      91   275 ..     1   213 []   375.3 8.8e-110

Alignments of top-scoring domains:
PF02146.8.fs: domain 1 of 1, from 91 to 275: score 373.4, E = 3.2e-109
                   *->GAGISteSGIPDFRSgkdGLYaklakeePdLasPeaffsnpylvwdP
                      GAGISt++GIPDFRS+++GLY++l+k++  L++Pea+f++ y++++P
     bm02123    91    GAGISTSAGIPDFRSPSTGLYDNLEKYH--LPYPEAIFEISYFKKHP 135  

                   epFYniarellpgpGqaqPNpaHyfiaeLEdkgkllrliTQNIDgLHrrA
                   epF+++a+el+pg  q++P+++Hyf+++L dkg llr++TQNID+L+r A
     bm02123   136 EPFFALAKELYPG--QFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIA 183  

                   GskdekVvElHGSfakarCvs..ChkkytgeelperiraakvpfkFdiPk
                   G+++e++vE+HG+f++ +Cvs +C+++y++++++e+i+++++p      k
     bm02123   184 GLEQEDLVEAHGTFYTSHCVSasCRHEYPLSWMKEKIFSEVTP------K 227  

                   CpkCGgkreplkVgdsespdLasfGllKPDIVFFGEaLPqdkffrayeed
                   C++C++                   l+KPDIVFFGE+LP  +ff+++++d
     bm02123   228 CEDCQS-------------------LVKPDIVFFGESLP-ARFFSCMQSD 257  

                   veeaDlliViGTSLkVyP<-*
                   ++++Dll+V+GTSL+V+P   
     bm02123   258 FLKVDLLLVMGTSLQVQP    275  

PF02146.8.ls: domain 1 of 1, from 91 to 275: score 375.3, E = 8.8e-110
                   *->GAGISteSGIPDFRSgkdGLYaklakeePdLasPeaffsnpylvwdP
                      GAGISt++GIPDFRS+++GLY++l+k++  L++Pea+f++ y++++P
     bm02123    91    GAGISTSAGIPDFRSPSTGLYDNLEKYH--LPYPEAIFEISYFKKHP 135  

                   epFYniarellpgpGqaqPNpaHyfiaeLEdkgkllrliTQNIDgLHrrA
                   epF+++a+el+pg  q++P+++Hyf+++L dkg llr++TQNID+L+r A
     bm02123   136 EPFFALAKELYPG--QFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIA 183  

                   GskdekVvElHGSfakarCvs..ChkkytgeelperiraakvpfkFdiPk
                   G+++e++vE+HG+f++ +Cvs +C+++y++++++e+i+++++p      k
     bm02123   184 GLEQEDLVEAHGTFYTSHCVSasCRHEYPLSWMKEKIFSEVTP------K 227  

                   CpkCGgkreplkVgdsespdLasfGllKPDIVFFGEaLPqdkffrayeed
                   C++C++                   l+KPDIVFFGE+LP  +ff+++++d
     bm02123   228 CEDCQS-------------------LVKPDIVFFGESLP-ARFFSCMQSD 257  

                   veeaDlliViGTSLkVyP<-*
                   ++++Dll+V+GTSL+V+P   
     bm02123   258 FLKVDLLLVMGTSLQVQP    275  

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