hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-21531980/chunk_1/iprscan-20090617-21531980.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: bm02155
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
TIGR01130  ER_PDI_fam: protein disulfide isomerases     685.9   9.8e-204   1
TIGR01126  pdi_dom: protein disulfide-isomerase domai   374.0   7.5e-110   2

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
TIGR01130    1/1      48   528 .]     1   522 []   685.9 9.8e-204
TIGR01126    1/2      53   155 ..     1   107 []   176.7  1.9e-50
TIGR01126    2/2     404   507 ..     1   107 []   197.3  1.2e-56

Alignments of top-scoring domains:
TIGR01130: domain 1 of 1, from 48 to 528: score 685.9, E = 9.8e-204
                   *->edVlvLtkdNFddfIk...snefvLVEFYAPWCGHCKsLAPEYekAA
                      +dVl+Lt+dNF+  I +++s  + LVEF+APWCGHCK+LAPEYe+AA
     bm02155    48    SDVLELTDDNFESRISdtgSAGLMLVEFFAPWCGHCKRLAPEYEAAA 94   

                   teLkkkgppikLAKVDATeEkdLaqkygVsGYPTLKiFRnGkkdspsdYn
                   t Lk  g  ++LAKVD+T+++  + kygVsGYPTLKiFR+G+   +  Y+
     bm02155    95 TRLK--G-IVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGE--EAGAYD 139  

                   GPRdadgIVkYmkkqsGPaskeietvddleefladeddvvViGfFkdlds
                   GPR+adgIV+ +kkq GPas+ ++t++++++f++d +d  ++GfF d+ s
     bm02155   140 GPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISD-KDASIVGFFDDSFS 188  

                   elvdtFlevAeklrDvffffahssdvaafaklgakpdsvvlfkpkdersK
                   e++  Fl++A++lrD+++ fah++ +    +++  +++++lf+p ++ +K
     bm02155   189 EAHSEFLKAASNLRDNYR-FAHTNVESLVNEYDDNGEGIILFRPSHLTNK 237  

                   FEpdsekvdgeldtDveaLekFikaeslplVgeftqetaskifesgYlpl
                   FE ++  + +++ t ++ ++kFi+++  +   ++t+++ + i++++   l
     bm02155   238 FEDKTVAYTEQKMT-SGKIKKFIQENIFGICPHMTEDNKDLIQGKD---L 283  

                   vvlyynvdeslnpsGseelrdkfleaAkkfkGkvifvkFavadeedfgre
                    + yy vd+++n++Gs+++r+++  +Akkf +   +++Fava  + f++e
     bm02155   284 LIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHE 333  

                   leyfGLkaek..dfPavaIqdldgdmkKYpmdqekEftfeeEsenlkaFv
                   l++fGL+ ++ ++ P+vaI++ +g  +K+ m    Ef+    +++l+ F+
     bm02155   334 LSDFGLE-STagEIPVVAIRTAKG--EKFVMQE--EFSR--DGKALERFL 376  

                   kdfldGklkPhlKSePIPedwdegPVkvvVGkNFdeIVlDetKDVLvEFY
                    d++dG+lk +lKSePIPe+ ++gPVkvvV++NFdeIV++e KDVL+EFY
     bm02155   377 QDYFDGNLKRYLKSEPIPES-NDGPVKVVVAENFDEIVNNENKDVLIEFY 425  

                   APWCGHCKkLaPiYeeLAekykdsaeddVVIAKmDATaNDvPpefeVeGF
                   APWCGHCK+L+P+Y+eL+ek+++  ++++VIAKmDATaNDvP+++eV+GF
     bm02155   426 APWCGHCKNLEPKYKELGEKLSK--DPNIVIAKMDATANDVPSPYEVRGF 473  

                   PTIkFvPAGkKsePVkYeGdRtledlikFIakhatiplegkkeeseedek
                   PTI+F PA+kK +P kYeG+R+l d+i ++ ++at p  ++         
     bm02155   474 PTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNP-PVIQ-------- 514  

                   eSeekeettEtaaedeeedassedekKDEL<-*
                                   ee ++++++  ++L   
     bm02155   515 ----------------EEKPKKKKKAQEDL    528  

TIGR01126: domain 1 of 2, from 53 to 155: score 176.7, E = 1.9e-50
                   *->LtasNFdeivld..snkdVLVEFYAPWCGHCKnLAPeYEKlAkelkk
                      Lt++NF++ + d++s  ++LVEF+APWCGHCK LAPeYE +A+ lk+
     bm02155    53    LTDDNFESRISDtgSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKG 99   

                   qkskivlAKVDATaeGkdlasrygVsGFPTikfFpkGskeNPvdYeGgRd
                       ++lAKVD+Ta+ +  + +ygVsG+PT+k+F++G +     Y+G+R+
     bm02155   100 ---IVPLAKVDCTAN-TNTCNKYGVSGYPTLKIFRDGEE--AGAYDGPRT 143  

                   leaiveFvneks<-*
                   +++iv+ +++++   
     bm02155   144 ADGIVSHLKKQA    155  

TIGR01126: domain 2 of 2, from 404 to 507: score 197.3, E = 1.2e-56
                   *->LtasNFdeivldsnkdVLVEFYAPWCGHCKnLAPeYEKlAkelkkqk
                      ++a+NFdeiv+++nkdVL+EFYAPWCGHCKnL P Y++l+++l+k++
     bm02155   404    VVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDP 450  

                   skivlAKVDATaeGkdlasrygVsGFPTikfFpkGskeNPvdYeGgRdle
                    +iv+AK+DATa+ ++  s y+V+GFPTi+f p+++k NP +YeGgR+l 
     bm02155   451 -NIVIAKMDATAN-DVP-SPYEVRGFPTIYFSPANKKLNPKKYEGGRELS 497  

                   aiveFvneks<-*
                   ++++++  ++   
     bm02155   498 DFISYLQREA    507  

//