hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-21592008/chunk_1/iprscan-20090617-21592008.nocrc
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Query sequence: bm02190
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00225.13.ls Kinesin motor domain                           618.9     4e-183   1
PF00225.13.fs Kinesin motor domain                           617.3   1.3e-182   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00225.13.fs   1/1      48   374 ..     1   424 []   617.3 1.3e-182
PF00225.13.ls   1/1      48   374 ..     1   424 []   618.9   4e-183

Alignments of top-scoring domains:
PF00225.13.fs: domain 1 of 1, from 48 to 374: score 617.3, E = 1.3e-182
                   *->RvRPlnerEksrgssdvvnv....sedvessvitn.gkektFtFDkV
                      R+RPlnerEks   +++v+v++ ++  + ++ +++++++ktFtFD V
     bm02190    48    RCRPLNEREKSMCYKQAVSVdemrGTITVHKTDSSnEPPKTFTFDTV 94   

                   FdpeatQelsepYAsqefvyestakplvesvleGyNvtIFAYGQTGSGKT
                   F+pe+          q +vy+ ta+p+++svleGyN+tIFAYGQTG+GKT
     bm02190    95 FGPESK---------QLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKT 135  

                   YTMeGstdsdksspnpsdsCttpeeepGiiPRaledlFerieerkerkpv
                   +TMeG ++               +e +GiiP ++ ++F +i++ + +   
     bm02190   136 FTMEGVRA--------------IPELRGIIPNSFAHIFGHIAKAEGD--- 168  

                   fKPklnekgwellncqetligvsfdtrglsSdlyvedlefsvkvSylEIY
                                                         +f+v+vSylEIY
     bm02190   169 -------------------------------------TRFLVRVSYLEIY 181  

                   NEkirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkmdgvyVkGL
                   NE++rDLL ++             +++  L+++e p+ G     vy+k+L
     bm02190   182 NEEVRDLLGKD-------------QTQR-LEVKERPDVG-----VYIKDL 212  

                   teveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFtitveqrntd
                   +  +V++a+++ +++ lG+knR+v++T+mNe+SSRSHaiFtit+e ++++
     bm02190   213 SAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKG 262  

                   ttgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkEaa
                    +g+           +vr +kL+LVDLAGSER++kTg   A+g+RLkEa+
     bm02190   263 IDGNM----------HVRMGKLHLVDLAGSERQAKTG---ATGQRLKEAT 299  

                   nINkSLsaLGnVInALadnqkssHiPYRDSKLTrLLQDSLGGGDNsKTlM
                   +IN+SLs+LGnVI+AL+d+ ks+H+PYR+SKLTrLLQDSLGG  NsKT+M
     bm02190   300 KINLSLSTLGNVISALVDG-KSTHVPYRNSKLTRLLQDSLGG--NSKTMM 346  

                   IaniSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                    ani P+++    ny+ET+sTLr+A+RAKnIk   
     bm02190   347 CANIGPADY----NYDETISTLRYANRAKNIK    374  

PF00225.13.ls: domain 1 of 1, from 48 to 374: score 618.9, E = 4e-183
                   *->RvRPlnerEksrgssdvvnv....sedvessvitn.gkektFtFDkV
                      R+RPlnerEks   +++v+v++ ++  + ++ +++++++ktFtFD V
     bm02190    48    RCRPLNEREKSMCYKQAVSVdemrGTITVHKTDSSnEPPKTFTFDTV 94   

                   FdpeatQelsepYAsqefvyestakplvesvleGyNvtIFAYGQTGSGKT
                   F+pe+          q +vy+ ta+p+++svleGyN+tIFAYGQTG+GKT
     bm02190    95 FGPESK---------QLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKT 135  

                   YTMeGstdsdksspnpsdsCttpeeepGiiPRaledlFerieerkerkpv
                   +TMeG ++               +e +GiiP ++ ++F +i++ + +   
     bm02190   136 FTMEGVRA--------------IPELRGIIPNSFAHIFGHIAKAEGD--- 168  

                   fKPklnekgwellncqetligvsfdtrglsSdlyvedlefsvkvSylEIY
                                                         +f+v+vSylEIY
     bm02190   169 -------------------------------------TRFLVRVSYLEIY 181  

                   NEkirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkmdgvyVkGL
                   NE++rDLL ++             +++  L+++e p+ G     vy+k+L
     bm02190   182 NEEVRDLLGKD-------------QTQR-LEVKERPDVG-----VYIKDL 212  

                   teveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFtitveqrntd
                   +  +V++a+++ +++ lG+knR+v++T+mNe+SSRSHaiFtit+e ++++
     bm02190   213 SAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKG 262  

                   ttgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkEaa
                    +g+           +vr +kL+LVDLAGSER++kTg   A+g+RLkEa+
     bm02190   263 IDGNM----------HVRMGKLHLVDLAGSERQAKTG---ATGQRLKEAT 299  

                   nINkSLsaLGnVInALadnqkssHiPYRDSKLTrLLQDSLGGGDNsKTlM
                   +IN+SLs+LGnVI+AL+d+ ks+H+PYR+SKLTrLLQDSLGG  NsKT+M
     bm02190   300 KINLSLSTLGNVISALVDG-KSTHVPYRNSKLTRLLQDSLGG--NSKTMM 346  

                   IaniSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                    ani P+++    ny+ET+sTLr+A+RAKnIk   
     bm02190   347 CANIGPADY----NYDETISTLRYANRAKNIK    374  

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