hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-21592008/chunk_1/iprscan-20090617-21592008.nocrc
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Query sequence: bm02190
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00129                                                 639.5   1.1e-187   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00129     1/1      40   381 ..     1   404 []   639.5 1.1e-187

Alignments of top-scoring domains:
SM00129: domain 1 of 1, from 40 to 381: score 639.5, E = 1.1e-187
                   *->kgnIrVavRvdrdRPlnkrEksekakeespsvvtv..tvtvn.....
                       +n++V+vR+   RPln+rEks++   ++ sv+++++t+tv++++++
     bm02190    40    CDNVKVVVRC---RPLNEREKSMC-YKQAVSVDEMrgTITVHktdss 82   

                   ......FtFDkVFWrydvddpsasQedVFeevaaPLvdsaldGYNvaTIF
                   ++++++FtFD VF      +p++ Q dV++ +a+P++ds+l+GYN+ TIF
     bm02190    83 neppktFTFDTVF------GPESKQLDVYNLTARPIIDSVLEGYNG-TIF 125  

                   AYGQTGSGKTyTMsGtptdpgilsndladitpdepGiIPRaledlFekid
                   AYGQTG+GKT+TM+G                p+ +GiIP ++ ++F +i+
     bm02190   126 AYGQTGTGKTFTMEGVR------------AIPELRGIIPNSFAHIFGHIA 163  

                   e......fsVkvSylEIYNEkirDLLspspenSksrGkhakqsskkkLri
                   + +++++f+V+vSylEIYNE++rDLL+++++              ++L++
     bm02190   164 KaegdtrFLVRVSYLEIYNEEVRDLLGKDQT--------------QRLEV 199  

                   rEdkngnrhdapkLtrlrgqggvyVvGLtevsVsSaeevlellerGnknR
                   +E ++                gvy+++L+  +V++a ++ +++ +G+knR
     bm02190   200 KERPD---------------VGVYIKDLSAYVVNNADDMDRIMTLGHKNR 234  

                   tvaaTkmNeeSSRSHaiFtitleqkeklepiadektesstnegteqikss
                   +v+aT+mNe+SSRSHaiFtit+e  ek+             +g+  ++ +
     bm02190   235 SVGATNMNEHSSRSHAIFTITIECSEKGI------------DGNMHVRMG 272  

                   kLnLVDLAGSERaskTgseaeGdRLkEaqnINkSLlaLGnVInALaddsh
                   kL+LVDLAGSER++kTg  a+G+RLkEa++IN+SL++LGnVI+AL+d   
     bm02190   273 KLHLVDLAGSERQAKTG--ATGQRLKEATKINLSLSTLGNVISALVD--- 317  

                   dsaeseatkqaggkssHIPYRDSKLTrLLQdSLGGNsKTlMIanvSPsss
                               gks+H+PYR+SKLTrLLQdSLGGNsKT+M an+ P+++
     bm02190   318 ------------GKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADY 355  

                   nyeETlsTLrFAsRaksIknkpavne<-*
                   ny+ET+sTLr+A+Rak+Iknk+ +ne   
     bm02190   356 NYDETISTLRYANRAKNIKNKARINE    381  

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