# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm02321.fasta.nr -Q bm02321.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm02321, 316 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6822833 sequences Expectation_n fit: rho(ln(x))= 5.0508+/-0.000187; mu= 9.5638+/- 0.010 mean_var=65.3888+/-12.899, 0's: 30 Z-trim: 42 B-trim: 1137 in 1/65 Lambda= 0.158607 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089020|dbj|BAD92957.1| mitogen-activated prot ( 316) 2168 504.7 8.1e-141 gi|84578971|dbj|BAE72919.1| hypothetical protein [ ( 467) 2168 504.8 1.1e-140 gi|114637229|ref|XP_508390.2| PREDICTED: similar t ( 701) 2168 504.9 1.5e-140 gi|109106614|ref|XP_001113132.1| PREDICTED: mitoge ( 702) 2168 504.9 1.5e-140 gi|114637223|ref|XP_001160866.1| PREDICTED: mitoge ( 711) 2168 504.9 1.5e-140 gi|17433093|sp|Q9UQF2.1|JIP1_HUMAN C-jun-amino-ter ( 711) 2168 504.9 1.5e-140 gi|46249764|gb|AAH68470.1| Mitogen-activated prote ( 711) 2155 501.9 1.2e-139 gi|73983381|ref|XP_540760.2| PREDICTED: similar to ( 606) 2134 497.1 3e-138 gi|146186970|gb|AAI40688.1| MAPK8IP1 protein [Bos ( 710) 2133 496.9 4e-138 gi|149022677|gb|EDL79571.1| mitogen activated prot ( 615) 2128 495.7 7.9e-138 gi|149022679|gb|EDL79573.1| mitogen activated prot ( 618) 2128 495.7 7.9e-138 gi|149022678|gb|EDL79572.1| mitogen activated prot ( 674) 2128 495.7 8.5e-138 gi|5051887|gb|AAD38352.1| JIP-2a [Rattus norvegicu ( 699) 2128 495.8 8.7e-138 gi|87130877|gb|ABD24062.1| JIP1 protein [Rattus no ( 708) 2128 495.8 8.8e-138 gi|17432932|sp|Q9R237.2|JIP1_RAT C-jun-amino-termi ( 708) 2128 495.8 8.8e-138 gi|4557178|gb|AAD22543.1|AF108959_1 islet-brain 1 ( 715) 2128 495.8 8.9e-138 gi|5051885|gb|AAD38351.1| JIP-1c [Rattus norvegicu ( 715) 2128 495.8 8.9e-138 gi|3676828|gb|AAC62110.1| JIP-1 related protein [R ( 715) 2128 495.8 8.9e-138 gi|194217859|ref|XP_001915256.1| PREDICTED: simila ( 643) 2126 495.3 1.1e-137 gi|117616454|gb|ABK42245.1| Jip3 [synthetic constr ( 617) 2125 495.0 1.3e-137 gi|74150983|dbj|BAE27625.1| unnamed protein produc ( 673) 2125 495.1 1.4e-137 gi|148695654|gb|EDL27601.1| mitogen activated prot ( 673) 2125 495.1 1.4e-137 gi|123212134|emb|CAM20624.1| mitogen activated pro ( 698) 2125 495.1 1.4e-137 gi|49119049|gb|AAH72578.1| Mapk8ip1 protein [Mus m ( 698) 2125 495.1 1.4e-137 gi|17433097|sp|Q9WVI9|JIP1_MOUSE C-jun-amino-termi ( 707) 2125 495.1 1.4e-137 gi|14193719|gb|AAK56104.1|AF332076_1 protein kinas ( 707) 2125 495.1 1.4e-137 gi|5051881|gb|AAD38349.1| JIP-3 [Mus musculus] ( 617) 2113 492.3 8.5e-137 gi|5051879|gb|AAD38348.1| JIP-2b [Mus musculus] ( 673) 2113 492.3 9.1e-137 gi|5051877|gb|AAD38347.1| JIP-2a [Mus musculus] ( 698) 2113 492.3 9.4e-137 gi|5051875|gb|AAD38346.1| JIP-1b [Mus musculus] ( 707) 2113 492.3 9.5e-137 gi|114637225|ref|XP_001160781.1| PREDICTED: mitoge ( 703) 2092 487.5 2.6e-135 gi|114666632|ref|XP_511574.2| PREDICTED: similar t ( 432) 2051 478.0 1.2e-132 gi|169211033|ref|XP_001719193.1| PREDICTED: simila ( 433) 2035 474.3 1.5e-131 gi|169211037|ref|XP_001719209.1| PREDICTED: simila ( 423) 2022 471.4 1.2e-130 gi|126332688|ref|XP_001369068.1| PREDICTED: simila ( 601) 1976 460.9 2.3e-127 gi|118091581|ref|XP_421126.2| PREDICTED: hypotheti ( 604) 1887 440.6 3.1e-121 gi|109106616|ref|XP_001113009.1| PREDICTED: mitoge ( 673) 1839 429.6 6.8e-118 gi|114637227|ref|XP_001160696.1| PREDICTED: mitoge ( 682) 1839 429.6 6.9e-118 gi|2852609|gb|AAC19150.1| unknown [Homo sapiens] ( 244) 1663 389.1 4e-106 gi|47230762|emb|CAF99955.1| unnamed protein produc ( 759) 1666 390.1 6.2e-106 gi|189537527|ref|XP_001919760.1| PREDICTED: simila ( 735) 1356 319.1 1.4e-84 gi|148726007|emb|CAN88511.1| novel protein similar ( 359) 1299 305.9 6.5e-81 gi|189531490|ref|XP_685086.3| PREDICTED: similar t (1242) 1299 306.2 1.7e-80 gi|94732634|emb|CAK05316.1| novel protein similar ( 260) 1254 295.5 6.3e-78 gi|47216037|emb|CAG11368.1| unnamed protein produc ( 707) 1243 293.3 8e-77 gi|76617321|ref|XP_876303.1| PREDICTED: similar to ( 821) 1220 288.0 3.5e-75 gi|117558078|gb|AAI27316.1| LOC100036643 protein [ (1016) 1220 288.1 4.1e-75 gi|126338987|ref|XP_001362302.1| PREDICTED: simila ( 885) 1219 287.8 4.3e-75 gi|73968805|ref|XP_855657.1| PREDICTED: similar to ( 445) 1214 286.5 5.5e-75 gi|194227026|ref|XP_001914980.1| PREDICTED: simila ( 716) 1214 286.6 8.1e-75 >>gi|62089020|dbj|BAD92957.1| mitogen-activated protein (316 aa) initn: 2168 init1: 2168 opt: 2168 Z-score: 2683.3 bits: 504.7 E(): 8.1e-141 Smith-Waterman score: 2168; 100.000% identity (100.000% similar) in 316 aa overlap (1-316:1-316) 10 20 30 40 50 60 bm0232 LRPCFGDYSDESDSATVYDNCASVSSPYESAIGEEYEEAPRPQPPACLSEDSTPDEPDVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LRPCFGDYSDESDSATVYDNCASVSSPYESAIGEEYEEAPRPQPPACLSEDSTPDEPDVH 10 20 30 40 50 60 70 80 90 100 110 120 bm0232 FSKKFLNVFMSGRSRSSSAESFGLFSCIINGEEQEQTHRAIFRFVPRHEDELELEVDDPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FSKKFLNVFMSGRSRSSSAESFGLFSCIINGEEQEQTHRAIFRFVPRHEDELELEVDDPL 70 80 90 100 110 120 130 140 150 160 170 180 bm0232 LVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTKEPEHMAALAKNSDWVDQFRVKFLGSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTKEPEHMAALAKNSDWVDQFRVKFLGSV 130 140 150 160 170 180 190 200 210 220 230 240 bm0232 QVPYHKGNDVLCAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSQEAKGNKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QVPYHKGNDVLCAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSQEAKGNKC 190 200 210 220 230 240 250 260 270 280 290 300 bm0232 SHFFQLKNISFCGYHPKNNKYFGFITKHPADHRFACHVFVSEDSTKALAESVGRAFQQFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SHFFQLKNISFCGYHPKNNKYFGFITKHPADHRFACHVFVSEDSTKALAESVGRAFQQFY 250 260 270 280 290 300 310 bm0232 KQFVEYTCPTEDIYLE :::::::::::::::: gi|620 KQFVEYTCPTEDIYLE 310 >>gi|84578971|dbj|BAE72919.1| hypothetical protein [Maca (467 aa) initn: 2168 init1: 2168 opt: 2168 Z-score: 2680.8 bits: 504.8 E(): 1.1e-140 Smith-Waterman score: 2168; 100.000% identity (100.000% similar) in 316 aa overlap (1-316:152-467) 10 20 30 bm0232 LRPCFGDYSDESDSATVYDNCASVSSPYES :::::::::::::::::::::::::::::: gi|845 SLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFGDYSDESDSATVYDNCASVSSPYES 130 140 150 160 170 180 40 50 60 70 80 90 bm0232 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|845 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN 190 200 210 220 230 240 100 110 120 130 140 150 bm0232 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|845 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI 250 260 270 280 290 300 160 170 180 190 200 210 bm0232 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|845 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP 310 320 330 340 350 360 220 230 240 250 260 270 bm0232 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|845 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA 370 380 390 400 410 420 280 290 300 310 bm0232 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE :::::::::::::::::::::::::::::::::::::::::::::: gi|845 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE 430 440 450 460 >>gi|114637229|ref|XP_508390.2| PREDICTED: similar to JI (701 aa) initn: 2168 init1: 2168 opt: 2168 Z-score: 2678.3 bits: 504.9 E(): 1.5e-140 Smith-Waterman score: 2168; 100.000% identity (100.000% similar) in 316 aa overlap (1-316:386-701) 10 20 30 bm0232 LRPCFGDYSDESDSATVYDNCASVSSPYES :::::::::::::::::::::::::::::: gi|114 SLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFGDYSDESDSATVYDNCASVSSPYES 360 370 380 390 400 410 40 50 60 70 80 90 bm0232 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN 420 430 440 450 460 470 100 110 120 130 140 150 bm0232 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI 480 490 500 510 520 530 160 170 180 190 200 210 bm0232 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP 540 550 560 570 580 590 220 230 240 250 260 270 bm0232 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA 600 610 620 630 640 650 280 290 300 310 bm0232 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE :::::::::::::::::::::::::::::::::::::::::::::: gi|114 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE 660 670 680 690 700 >>gi|109106614|ref|XP_001113132.1| PREDICTED: mitogen-ac (702 aa) initn: 2168 init1: 2168 opt: 2168 Z-score: 2678.3 bits: 504.9 E(): 1.5e-140 Smith-Waterman score: 2168; 100.000% identity (100.000% similar) in 316 aa overlap (1-316:387-702) 10 20 30 bm0232 LRPCFGDYSDESDSATVYDNCASVSSPYES :::::::::::::::::::::::::::::: gi|109 SLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFGDYSDESDSATVYDNCASVSSPYES 360 370 380 390 400 410 40 50 60 70 80 90 bm0232 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN 420 430 440 450 460 470 100 110 120 130 140 150 bm0232 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI 480 490 500 510 520 530 160 170 180 190 200 210 bm0232 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP 540 550 560 570 580 590 220 230 240 250 260 270 bm0232 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA 600 610 620 630 640 650 280 290 300 310 bm0232 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE :::::::::::::::::::::::::::::::::::::::::::::: gi|109 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE 660 670 680 690 700 >>gi|114637223|ref|XP_001160866.1| PREDICTED: mitogen-ac (711 aa) initn: 2168 init1: 2168 opt: 2168 Z-score: 2678.2 bits: 504.9 E(): 1.5e-140 Smith-Waterman score: 2168; 100.000% identity (100.000% similar) in 316 aa overlap (1-316:396-711) 10 20 30 bm0232 LRPCFGDYSDESDSATVYDNCASVSSPYES :::::::::::::::::::::::::::::: gi|114 SLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFGDYSDESDSATVYDNCASVSSPYES 370 380 390 400 410 420 40 50 60 70 80 90 bm0232 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN 430 440 450 460 470 480 100 110 120 130 140 150 bm0232 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI 490 500 510 520 530 540 160 170 180 190 200 210 bm0232 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP 550 560 570 580 590 600 220 230 240 250 260 270 bm0232 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA 610 620 630 640 650 660 280 290 300 310 bm0232 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE :::::::::::::::::::::::::::::::::::::::::::::: gi|114 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE 670 680 690 700 710 >>gi|17433093|sp|Q9UQF2.1|JIP1_HUMAN C-jun-amino-termina (711 aa) initn: 2168 init1: 2168 opt: 2168 Z-score: 2678.2 bits: 504.9 E(): 1.5e-140 Smith-Waterman score: 2168; 100.000% identity (100.000% similar) in 316 aa overlap (1-316:396-711) 10 20 30 bm0232 LRPCFGDYSDESDSATVYDNCASVSSPYES :::::::::::::::::::::::::::::: gi|174 SLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFGDYSDESDSATVYDNCASVSSPYES 370 380 390 400 410 420 40 50 60 70 80 90 bm0232 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|174 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN 430 440 450 460 470 480 100 110 120 130 140 150 bm0232 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|174 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI 490 500 510 520 530 540 160 170 180 190 200 210 bm0232 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|174 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP 550 560 570 580 590 600 220 230 240 250 260 270 bm0232 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|174 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA 610 620 630 640 650 660 280 290 300 310 bm0232 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE :::::::::::::::::::::::::::::::::::::::::::::: gi|174 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE 670 680 690 700 710 >>gi|46249764|gb|AAH68470.1| Mitogen-activated protein k (711 aa) initn: 2155 init1: 2155 opt: 2155 Z-score: 2662.1 bits: 501.9 E(): 1.2e-139 Smith-Waterman score: 2155; 99.367% identity (100.000% similar) in 316 aa overlap (1-316:396-711) 10 20 30 bm0232 LRPCFGDYSDESDSATVYDNCASVSSPYES :::::::::::::::::::::::::::::: gi|462 SLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFGDYSDESDSATVYDNCASVSSPYES 370 380 390 400 410 420 40 50 60 70 80 90 bm0232 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|462 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN 430 440 450 460 470 480 100 110 120 130 140 150 bm0232 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|462 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI 490 500 510 520 530 540 160 170 180 190 200 210 bm0232 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|462 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP 550 560 570 580 590 600 220 230 240 250 260 270 bm0232 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|462 PSSCVLEINVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA 610 620 630 640 650 660 280 290 300 310 bm0232 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE :.:::::::::::::::::::::::::::::::::::::::::::: gi|462 DNRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE 670 680 690 700 710 >>gi|73983381|ref|XP_540760.2| PREDICTED: similar to C-j (606 aa) initn: 2134 init1: 2134 opt: 2134 Z-score: 2637.2 bits: 497.1 E(): 3e-138 Smith-Waterman score: 2134; 98.101% identity (99.684% similar) in 316 aa overlap (1-316:291-606) 10 20 30 bm0232 LRPCFGDYSDESDSATVYDNCASVSSPYES :::::::::::::::::::::::.:::::: gi|739 SLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFGDYSDESDSATVYDNCASASSPYES 270 280 290 300 310 320 40 50 60 70 80 90 bm0232 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN ::::::::::::.: ::::::::::::::::::::::::::::::::::::::::::.:: gi|739 AIGEEYEEAPRPRPSACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCVIN 330 340 350 360 370 380 100 110 120 130 140 150 bm0232 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI 390 400 410 420 430 440 160 170 180 190 200 210 bm0232 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EVTKEPEHMAALTKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP 450 460 470 480 490 500 220 230 240 250 260 270 bm0232 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA 510 520 530 540 550 560 280 290 300 310 bm0232 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE ::::::::::::.::::::::::::::::::::::::::::::::: gi|739 DHRFACHVFVSEESTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE 570 580 590 600 >>gi|146186970|gb|AAI40688.1| MAPK8IP1 protein [Bos taur (710 aa) initn: 2133 init1: 2133 opt: 2133 Z-score: 2634.9 bits: 496.9 E(): 4e-138 Smith-Waterman score: 2133; 97.468% identity (100.000% similar) in 316 aa overlap (1-316:395-710) 10 20 30 bm0232 LRPCFGDYSDESDSATVYDNCASVSSPYES :::::::::::::::::::::::.:::::: gi|146 SLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFGDYSDESDSATVYDNCASASSPYES 370 380 390 400 410 420 40 50 60 70 80 90 bm0232 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN ::::::::::::.::.:::::::::::::::::::::::::::::::::::::::::.:: gi|146 AIGEEYEEAPRPRPPTCLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCVIN 430 440 450 460 470 480 100 110 120 130 140 150 bm0232 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|146 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGIFPAYYAI 490 500 510 520 530 540 160 170 180 190 200 210 bm0232 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|146 EVTKEPEHMAALTKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP 550 560 570 580 590 600 220 230 240 250 260 270 bm0232 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 PSSCVLEISVQGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA 610 620 630 640 650 660 280 290 300 310 bm0232 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE ::::::::::::.::::::::::::::::::::::::::::::::: gi|146 DHRFACHVFVSEESTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE 670 680 690 700 710 >>gi|149022677|gb|EDL79571.1| mitogen activated protein (615 aa) initn: 2128 init1: 2128 opt: 2128 Z-score: 2629.7 bits: 495.7 E(): 7.9e-138 Smith-Waterman score: 2128; 97.152% identity (100.000% similar) in 316 aa overlap (1-316:300-615) 10 20 30 bm0232 LRPCFGDYSDESDSATVYDNCASVSSPYES :::::::::::::::::::::::.:::::: gi|149 SLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFGDYSDESDSATVYDNCASASSPYES 270 280 290 300 310 320 40 50 60 70 80 90 bm0232 AIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCIIN ::::::::::.:.::.:::::::::::::::::::::::::::::::::::::::::.:: gi|149 AIGEEYEEAPQPRPPTCLSEDSTPDEPDVHFSKKFLNVFMSGRSRSSSAESFGLFSCVIN 330 340 350 360 370 380 100 110 120 130 140 150 bm0232 GEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GEEHEQTHRAIFRFVPRHEDELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAI 390 400 410 420 430 440 160 170 180 190 200 210 bm0232 EVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|149 EVTKEPEHMAALAKNSDWIDQFRVKFLGSVQVPYHKGNDVLCAAMQKIATTRRLTVHFNP 450 460 470 480 490 500 220 230 240 250 260 270 bm0232 PSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA ::::::::::::::::::::..:::::::::::::::::::::::::::::::::::::: gi|149 PSSCVLEISVRGVKIGVKADEAQEAKGNKCSHFFQLKNISFCGYHPKNNKYFGFITKHPA 510 520 530 540 550 560 280 290 300 310 bm0232 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE :::::::::::::::::::::::::::::::::::::::::::::: gi|149 DHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEYTCPTEDIYLE 570 580 590 600 610 316 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 12:07:40 2008 done: Thu Aug 7 12:10:15 2008 Total Scan time: 742.340 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]