hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-12101662/chunk_1/iprscan-20080807-12101662.nocrc
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Query sequence: bm02321
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00640.13.fs Phosphotyrosine interaction domain (PTB/PID)   177.0    8.4e-52   1
PF00640.13.ls Phosphotyrosine interaction domain (PTB/PID)   178.9    1.2e-50   1
PF00018.18.fs SH3 domain                                      22.3    2.6e-05   1
PF00018.18.ls SH3 domain                                      22.6      8e-05   1
PF07653.7.ls Variant SH3 domain                              21.9     0.0014   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00018.18.ls   1/1      96   152 ..     1    59 []    22.6    8e-05
PF00018.18.fs   1/1      96   148 ..     1    55 [.    22.3  2.6e-05
PF07653.7.ls   1/1      97   152 ..     1    69 []    21.9   0.0014
PF00640.13.fs   1/1     172   306 ..     1   165 []   177.0  8.4e-52
PF00640.13.ls   1/1     172   306 ..     1   165 []   178.9  1.2e-50

Alignments of top-scoring domains:
PF00018.18.ls: domain 1 of 1, from 96 to 152: score 22.6, E = 8e-05
                   *->kkvvALYDYearesdELsFkkGDvitvleksddpgWWkgrlkgtgGk
                      ++ +A++ +++r++dEL ++  D + v  + +d  W+++ + +tg  
     bm02321    96    QTHRAIFRFVPRHEDELELEVDDPLLVELQAED-YWYEAYNMRTG-A 140  

                   eGliPsNYVepv<-*
                   +G +P+ Y  +v   
     bm02321   141 RGVFPAYYAIEV    152  

PF00018.18.fs: domain 1 of 1, from 96 to 148: score 22.3, E = 2.6e-05
                   *->kkvvALYDYearesdELsFkkGDvitvleksddpgWWkgrlkgtgGk
                      ++ +A++ +++r++dEL ++  D + v  + +d  W+++ + +tg  
     bm02321    96    QTHRAIFRFVPRHEDELELEVDDPLLVELQAED-YWYEAYNMRTG-A 140  

                   eGliPsNY<-*
                   +G +P+ Y   
     bm02321   141 RGVFPAYY    148  

PF07653.7.ls: domain 1 of 1, from 97 to 152: score 21.9, E = 0.0014
                   *->ygraiedyvaAtdknenleeeeLslkkGd..vvkVidvggskdddgw
                       +rai+ +v+ + ++e      L l+++d+ +v+++        d w
     bm02321    97    THRAIFRFVP-RHEDE------LELEVDDplLVELQ------AEDYW 130  

                   wegeslggGrrrRGlvPssaveel<-*
                   +e+++   G r  G++P+ +  e+   
     bm02321   131 YEAYNMRTGAR--GVFPAYYAIEV    152  

PF00640.13.fs: domain 1 of 1, from 172 to 306: score 177.0, E = 8.4e-52
                   *->FevkYLGsveVpeemrapdkntRmdvaneAisrvkmavpgKkpkakk
                      F+vk+LGsv+Vp++             ++ +++++m+         k
     bm02321   172    FRVKFLGSVQVPYH------------KGNDVLCAAMQ---------K 197  

                   ikrikgsrgerqpgtkidLsistdglklldektea....ekevlhdhplr
                   i+++++++++ +p+ +++L+is +g+k+  ++++ ++ ++++++h+++l+
     bm02321   198 IATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSqeakGNKCSHFFQLK 247  

                   kISFiavggDpdVdlrtFayarrsqdiiaadgatgkfaCHvFecekgkql
                   +ISF+++  +p+ ++++F++       i++++a+++faCHvF++e+   +
     bm02321   248 NISFCGY--HPK-NNKYFGF-------ITKHPADHRFACHVFVSED---S 284  

                   AediaqavGqAFevaYqeflra<-*
                   ++++a++vG+AF+++Y++f+++   
     bm02321   285 TKALAESVGRAFQQFYKQFVEY    306  

PF00640.13.ls: domain 1 of 1, from 172 to 306: score 178.9, E = 1.2e-50
                   *->FevkYLGsveVpeemrapdkntRmdvaneAisrvkmavpgKkpkakk
                      F+vk+LGsv+Vp++             ++ +++++m+         k
     bm02321   172    FRVKFLGSVQVPYH------------KGNDVLCAAMQ---------K 197  

                   ikrikgsrgerqpgtkidLsistdglklldektea....ekevlhdhplr
                   i+++++++++ +p+ +++L+is +g+k+  ++++ ++ ++++++h+++l+
     bm02321   198 IATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSqeakGNKCSHFFQLK 247  

                   kISFiavggDpdVdlrtFayarrsqdiiaadgatgkfaCHvFecekgkql
                   +ISF+++  +p+ ++++F++       i++++a+++faCHvF++e+   +
     bm02321   248 NISFCGY--HPK-NNKYFGF-------ITKHPADHRFACHVFVSED---S 284  

                   AediaqavGqAFevaYqeflra<-*
                   ++++a++vG+AF+++Y++f+++   
     bm02321   285 TKALAESVGRAFQQFYKQFVEY    306  

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