# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm02364.fasta.nr -Q bm02364.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm02364, 745 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6794821 sequences Expectation_n fit: rho(ln(x))= 6.7191+/-0.000221; mu= 6.4160+/- 0.012 mean_var=208.8149+/-39.535, 0's: 38 Z-trim: 161 B-trim: 98 in 1/66 Lambda= 0.088755 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|109101818|ref|XP_001116949.1| PREDICTED: simila ( 938) 4749 621.6 3.5e-175 gi|90110781|sp|P19338|NUCL_HUMAN Nucleolin (Protei ( 710) 4624 605.5 2e-170 gi|189306|gb|AAA59954.1| nucleolin ( 707) 4592 601.4 3.4e-169 gi|75070972|sp|Q5RF26.3|NUCL_PONAB Nucleolin g ( 712) 4584 600.3 6.9e-169 gi|75075722|sp|Q4R4J7|NUCL_MACFA Nucleolin gi| ( 711) 4572 598.8 2e-168 gi|5929884|gb|AAD56625.1|AF151373_1 nucleolin-rela ( 715) 4308 565.0 3e-158 gi|73993958|ref|XP_850477.1| PREDICTED: similar to ( 699) 4197 550.8 5.6e-154 gi|193788267|dbj|BAG53161.1| unnamed protein produ ( 633) 4119 540.7 5.4e-151 gi|21750187|dbj|BAC03738.1| unnamed protein produc ( 687) 4062 533.5 8.9e-149 gi|73993964|ref|XP_861613.1| PREDICTED: similar to ( 678) 3941 518.0 4.1e-144 gi|73993966|ref|XP_861643.1| PREDICTED: similar to ( 682) 3923 515.7 2e-143 gi|128842|sp|P08199|NUCL_MESAU Nucleolin (Protein ( 714) 3904 513.3 1.1e-142 gi|55250726|gb|AAH85751.1| Nucleolin [Rattus norve ( 714) 3897 512.4 2.1e-142 gi|128844|sp|P13383|NUCL_RAT Nucleolin (Protein C2 ( 713) 3895 512.1 2.5e-142 gi|149016331|gb|EDL75577.1| nucleolin, isoform CRA ( 698) 3822 502.8 1.6e-139 gi|128843|sp|P09405|NUCL_MOUSE Nucleolin (Protein ( 707) 3805 500.6 7.3e-139 gi|74177681|dbj|BAE38940.1| unnamed protein produc ( 707) 3802 500.2 9.5e-139 gi|13529464|gb|AAH05460.1| Nucleolin [Mus musculus ( 707) 3801 500.1 1e-138 gi|74179817|dbj|BAE36484.1| unnamed protein produc ( 707) 3801 500.1 1e-138 gi|74214426|dbj|BAE40448.1| unnamed protein produc ( 707) 3795 499.3 1.8e-138 gi|26325114|dbj|BAC26311.1| unnamed protein produc ( 707) 3788 498.4 3.3e-138 gi|148708277|gb|EDL40224.1| nucleolin, isoform CRA ( 706) 3778 497.1 8e-138 gi|26327461|dbj|BAC27474.1| unnamed protein produc ( 707) 3771 496.2 1.5e-137 gi|194211413|ref|XP_001495211.2| PREDICTED: nucleo ( 705) 3759 494.7 4.3e-137 gi|387050|gb|AAA36966.1| nucleolin, C23 ( 679) 3713 488.8 2.5e-135 gi|73993962|ref|XP_861582.1| PREDICTED: similar to ( 632) 3552 468.1 3.9e-129 gi|119591368|gb|EAW70962.1| nucleolin, isoform CRA ( 536) 3517 463.6 7.8e-128 gi|76682880|ref|XP_614626.2| PREDICTED: similar to ( 720) 3507 462.4 2.3e-127 gi|114583889|ref|XP_516145.2| PREDICTED: hypotheti (1006) 3446 454.8 6.2e-125 gi|73993960|ref|XP_861553.1| PREDICTED: similar to ( 632) 3425 451.9 3e-124 gi|34534595|dbj|BAC87055.1| unnamed protein produc ( 603) 3280 433.3 1.1e-118 gi|148708276|gb|EDL40223.1| nucleolin, isoform CRA ( 624) 3170 419.2 2e-114 gi|126314629|ref|XP_001373122.1| PREDICTED: simila ( 705) 3124 413.4 1.3e-112 gi|148708275|gb|EDL40222.1| nucleolin, isoform CRA ( 608) 3093 409.3 1.9e-111 gi|26341628|dbj|BAC34476.1| unnamed protein produc ( 550) 3005 398.0 4.3e-108 gi|149016335|gb|EDL75581.1| nucleolin, isoform CRA ( 505) 2894 383.7 7.8e-104 gi|149016333|gb|EDL75579.1| nucleolin, isoform CRA ( 496) 2871 380.8 5.9e-103 gi|148708273|gb|EDL40220.1| nucleolin, isoform CRA ( 537) 2862 379.7 1.4e-102 gi|148708274|gb|EDL40221.1| nucleolin, isoform CRA ( 488) 2736 363.5 9.4e-98 gi|149567342|ref|XP_001509329.1| PREDICTED: simila ( 631) 2514 335.2 3.9e-89 gi|128840|sp|P15771|NUCL_CHICK Nucleolin (Protein ( 694) 2392 319.6 2.1e-84 gi|149016336|gb|EDL75582.1| nucleolin, isoform CRA ( 408) 2219 297.2 7.2e-78 gi|12847171|dbj|BAB27464.1| unnamed protein produc ( 444) 2185 292.9 1.5e-76 gi|149016338|gb|EDL75584.1| nucleolin, isoform CRA ( 397) 2159 289.5 1.4e-75 gi|295899|emb|CAA51460.1| nucleolin [Xenopus laevi ( 705) 2053 276.3 2.5e-71 gi|31455187|gb|AAH06494.3| NCL protein [Homo sapie ( 482) 1952 263.1 1.5e-67 gi|33359635|gb|AAQ17065.1| nucleolin 3 [Cyprinus c ( 637) 1953 263.4 1.7e-67 gi|119591366|gb|EAW70960.1| nucleolin, isoform CRA ( 490) 1927 259.9 1.4e-66 gi|60729607|pir||JC7925 nucleolin - common carp ( 693) 1922 259.5 2.8e-66 gi|115313778|gb|AAI24136.1| Zgc:152810 [Danio reri ( 704) 1922 259.5 2.8e-66 >>gi|109101818|ref|XP_001116949.1| PREDICTED: similar to (938 aa) initn: 3487 init1: 3487 opt: 4749 Z-score: 3300.1 bits: 621.6 E(): 3.5e-175 Smith-Waterman score: 4749; 97.326% identity (98.930% similar) in 748 aa overlap (1-745:191-938) 10 20 30 bm0236 VYVLRDLQHPRPPSPSLGFFWTHLRHLSAS :::::::::::::::::::.::::::.:: gi|109 ARPLPAPRRSRRLLGRLSLSPQSRALAGLRVYVLRDLQHPRPPSPSLGFLWTHLRHFSAP 170 180 190 200 210 220 40 50 60 70 80 bm0236 HSAAIMVKL--AKAGKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKG ::::: . :. :::::::::::::::::::::::::::::::::::::::::::::: gi|109 HSAAISRHHGEAREGKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKG 230 240 250 260 270 280 90 100 110 120 130 140 bm0236 KKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAAATPAKKTVTPAKAVTTPGKKGAT :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|109 KKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAAATPAKKTVTPAKAVATPGKKGAT 290 300 310 320 330 340 150 160 170 180 190 200 bm0236 PGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPA ::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::::: gi|109 PGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEEDDSEEDDEDDEDEDEDEDEIEPA 350 360 370 380 390 400 210 220 230 240 250 260 bm0236 AMKAAAAAPASEDEDDEDDEDDED-DDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNV .::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: gi|109 VMKAAAAAPASEDEDDEDDEDDEDEDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNV 410 420 430 440 450 460 270 280 290 300 310 320 bm0236 AEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPE :::::::::::::::::::::::.::.:..:::::::::::::::::::::::::::::: gi|109 AEDEDEEEDDEDEDDDDDEDDEDEDDDDEDEEEEEEEEEPVKEAPGKRKKEMAKQKAAPE 470 480 490 500 510 520 330 340 350 360 370 380 bm0236 AKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRKFGYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRKFGYV 530 540 550 560 570 580 390 400 410 420 430 440 bm0236 DFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEV 590 600 610 620 630 640 450 460 470 480 490 500 bm0236 FEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQNQD 650 660 670 680 690 700 510 520 530 540 550 560 bm0236 YRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFAS 710 720 730 740 750 760 570 580 590 600 610 620 bm0236 FEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESF 770 780 790 800 810 820 630 640 650 660 670 680 bm0236 DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGG 830 840 850 860 870 880 690 700 710 720 730 740 bm0236 FGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGGGDHKPQGKKTKFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGGGDHKPQGKKTKFE 890 900 910 920 930 >>gi|90110781|sp|P19338|NUCL_HUMAN Nucleolin (Protein C2 (710 aa) initn: 4624 init1: 4624 opt: 4624 Z-score: 3214.9 bits: 605.5 E(): 2e-170 Smith-Waterman score: 4624; 100.000% identity (100.000% similar) in 710 aa overlap (36-745:1-710) 10 20 30 40 50 60 bm0236 DLQHPRPPSPSLGFFWTHLRHLSASHSAAIMVKLAKAGKNQGDPKKMAPPPKEVEEDSED :::::::::::::::::::::::::::::: gi|901 MVKLAKAGKNQGDPKKMAPPPKEVEEDSED 10 20 30 70 80 90 100 110 120 bm0236 EEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 EEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAA 40 50 60 70 80 90 130 140 150 160 170 180 bm0236 ATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 ATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEED 100 110 120 130 140 150 190 200 210 220 230 240 bm0236 DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEA 160 170 180 190 200 210 250 260 270 280 290 300 bm0236 METTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 METTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEE 220 230 240 250 260 270 310 320 330 340 350 360 bm0236 EPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 EPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDV 280 290 300 310 320 330 370 380 390 400 410 420 bm0236 FAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 FAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKER 340 350 360 370 380 390 430 440 450 460 470 480 bm0236 DARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 DARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQ 400 410 420 430 440 450 490 500 510 520 530 540 bm0236 GTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 GTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT 460 470 480 490 500 510 550 560 570 580 590 600 bm0236 FIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 FIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQP 520 530 540 550 560 570 610 620 630 640 650 660 bm0236 SKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 SKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 580 590 600 610 620 630 670 680 690 700 710 720 bm0236 EDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 EDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGF 640 650 660 670 680 690 730 740 bm0236 RGGRGGGGDHKPQGKKTKFE :::::::::::::::::::: gi|901 RGGRGGGGDHKPQGKKTKFE 700 710 >>gi|189306|gb|AAA59954.1| nucleolin (707 aa) initn: 4898 init1: 4134 opt: 4592 Z-score: 3192.8 bits: 601.4 E(): 3.4e-169 Smith-Waterman score: 4592; 99.577% identity (99.577% similar) in 710 aa overlap (36-745:1-707) 10 20 30 40 50 60 bm0236 DLQHPRPPSPSLGFFWTHLRHLSASHSAAIMVKLAKAGKNQGDPKKMAPPPKEVEEDSED :::::::::::::::::::::::::::::: gi|189 MVKLAKAGKNQGDPKKMAPPPKEVEEDSED 10 20 30 70 80 90 100 110 120 bm0236 EEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 EEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAA 40 50 60 70 80 90 130 140 150 160 170 180 bm0236 ATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 ATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEED 100 110 120 130 140 150 190 200 210 220 230 240 bm0236 DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEA 160 170 180 190 200 210 250 260 270 280 290 300 bm0236 METTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 METTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEE 220 230 240 250 260 270 310 320 330 340 350 360 bm0236 EPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 EPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDV 280 290 300 310 320 330 370 380 390 400 410 420 bm0236 FAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 FAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKER 340 350 360 370 380 390 430 440 450 460 470 480 bm0236 DARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 DARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQ 400 410 420 430 440 450 490 500 510 520 530 540 bm0236 GTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 GTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT 460 470 480 490 500 510 550 560 570 580 590 600 bm0236 FIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 FIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQP 520 530 540 550 560 570 610 620 630 640 650 660 bm0236 SKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|189 SKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDA---KEAM 580 590 600 610 620 670 680 690 700 710 720 bm0236 EDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 EDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGF 630 640 650 660 670 680 730 740 bm0236 RGGRGGGGDHKPQGKKTKFE :::::::::::::::::::: gi|189 RGGRGGGGDHKPQGKKTKFE 690 700 >>gi|75070972|sp|Q5RF26.3|NUCL_PONAB Nucleolin gi|55 (712 aa) initn: 3306 init1: 3306 opt: 4584 Z-score: 3187.2 bits: 600.3 E(): 6.9e-169 Smith-Waterman score: 4584; 99.017% identity (99.719% similar) in 712 aa overlap (36-745:1-712) 10 20 30 40 50 60 bm0236 DLQHPRPPSPSLGFFWTHLRHLSASHSAAIMVKLAKAGKNQGDPKKMAPPPKEVEEDSED :::::::::::::::::::::::::::::: gi|750 MVKLAKAGKNQGDPKKMAPPPKEVEEDSED 10 20 30 70 80 90 100 110 120 bm0236 EEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 EEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAA 40 50 60 70 80 90 130 140 150 160 170 180 bm0236 ATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|750 ATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEE 100 110 120 130 140 150 190 200 210 220 230 240 bm0236 DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEA :::::::.:::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|750 DDSEEDEDDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDEDDDEEDDSEEEA 160 170 180 190 200 210 250 260 270 280 290 300 bm0236 METTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDD--EDDDDEDDEEEEEEE ::::::::::::::::::::::::::::::::::::::::.:: :::.::::::::::: gi|750 METTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDDDDDDEDDEDEDDEEEEEEE 220 230 240 250 260 270 310 320 330 340 350 360 bm0236 EEEPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 EEEPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGIS 280 290 300 310 320 330 370 380 390 400 410 420 bm0236 DVFAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 DVFAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKK 340 350 360 370 380 390 430 440 450 460 470 480 bm0236 ERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEE 400 410 420 430 440 450 490 500 510 520 530 540 bm0236 KQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 KQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEK 460 470 480 490 500 510 550 560 570 580 590 600 bm0236 ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARS 520 530 540 550 560 570 610 620 630 640 650 660 bm0236 QPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 QPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKE 580 590 600 610 620 630 670 680 690 700 710 720 bm0236 AMEDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 AMEDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRG 640 650 660 670 680 690 730 740 bm0236 GFRGGRGGGGDHKPQGKKTKFE :::::::::::::::::::::: gi|750 GFRGGRGGGGDHKPQGKKTKFE 700 710 >>gi|75075722|sp|Q4R4J7|NUCL_MACFA Nucleolin gi|6796 (711 aa) initn: 3487 init1: 3487 opt: 4572 Z-score: 3178.9 bits: 598.8 E(): 2e-168 Smith-Waterman score: 4572; 98.734% identity (99.859% similar) in 711 aa overlap (36-745:1-711) 10 20 30 40 50 60 bm0236 DLQHPRPPSPSLGFFWTHLRHLSASHSAAIMVKLAKAGKNQGDPKKMAPPPKEVEEDSED :::::::::::::::::::::::::::::: gi|750 MVKLAKAGKNQGDPKKMAPPPKEVEEDSED 10 20 30 70 80 90 100 110 120 bm0236 EEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 EEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAA 40 50 60 70 80 90 130 140 150 160 170 180 bm0236 ATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEED ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::. gi|750 ATPAKKTVTPAKAVATPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEE 100 110 120 130 140 150 190 200 210 220 230 240 bm0236 DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDED-DDDDEEDDSEEE ::::::.::::::::::::::::.::::::::::::::::::::::: :::::::::::: gi|750 DDSEEDDEDDEDEDEDEDEIEPAVMKAAAAAPASEDEDDEDDEDDEDEDDDDEEDDSEEE 160 170 180 190 200 210 250 260 270 280 290 300 bm0236 AMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEE ::::::::::::::::::::::::::::::::::::::::::::::.::.:..::::::: gi|750 AMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDEDDDDEDEEEEEEE 220 230 240 250 260 270 310 320 330 340 350 360 bm0236 EEPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 EEPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISD 280 290 300 310 320 330 370 380 390 400 410 420 bm0236 VFAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 VFAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKE 340 350 360 370 380 390 430 440 450 460 470 480 bm0236 RDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 RDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEK 400 410 420 430 440 450 490 500 510 520 530 540 bm0236 QGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 QGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKA 460 470 480 490 500 510 550 560 570 580 590 600 bm0236 TFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 TFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQ 520 530 540 550 560 570 610 620 630 640 650 660 bm0236 PSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 PSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEA 580 590 600 610 620 630 670 680 690 700 710 720 bm0236 MEDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 MEDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGG 640 650 660 670 680 690 730 740 bm0236 FRGGRGGGGDHKPQGKKTKFE ::::::::::::::::::::: gi|750 FRGGRGGGGDHKPQGKKTKFE 700 710 >>gi|5929884|gb|AAD56625.1|AF151373_1 nucleolin-related (715 aa) initn: 3174 init1: 3174 opt: 4308 Z-score: 2996.2 bits: 565.0 E(): 3e-158 Smith-Waterman score: 4308; 92.469% identity (98.466% similar) in 717 aa overlap (36-745:1-715) 10 20 30 40 50 60 bm0236 DLQHPRPPSPSLGFFWTHLRHLSASHSAAIMVKLAKAGKNQGDPKKMAPPPKEVEEDSED :::::::::::.:::::::::::::::::: gi|592 MVKLAKAGKNQSDPKKMAPPPKEVEEDSED 10 20 30 70 80 90 100 110 120 bm0236 EEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAA :::::::.::::::::::::::::::..: ::::.::::::::::::::::.:::::::: gi|592 EEMSEDEDDDSSGEEVVIPQKKGKKATTTPAKKVMVSPTKKVAVATPAKKAVVTPGKKAA 40 50 60 70 80 90 130 140 150 160 170 180 bm0236 ATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEED ::::::.:.:::::.::::::.:::::::::::::::: :::::::::::::::::::.: gi|592 ATPAKKAVAPAKAVATPGKKGTTPGKALVATPGKKGAATPAKGAKNGKNAKKEDSDEEDD 100 110 120 130 140 150 190 200 210 220 230 240 bm0236 DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDD----DDEEDDS :::: :::.:::::::::.::..::::::::::..:.:....:::::: :..:::: gi|592 DDSE--EEDEEDEDEDEDEFEPTVMKAAAAAPASDEEEDDEEDDDEDDDEEDEDEDEDDS 160 170 180 190 200 250 260 270 280 290 bm0236 EEEAMETTPAKGKKA-AKVVPVKAKNVAEDEDEEEDDEDEDDDDDED-DEDDDDEDDEEE ::::::::::::::: .:.::::::..:::::::::::::.:::.:. :::::.:.:::: gi|592 EEEAMETTPAKGKKAPVKAVPVKAKSTAEDEDEEEDDEDEEDDDEEEEDEDDDEEEDEEE 210 220 230 240 250 260 300 310 320 330 340 350 bm0236 EEEEEEE-PVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPEL ::::::: ::::::::::::::::::::::::::::.:::::.::::::::::.:::::: gi|592 EEEEEEEEPVKEAPGKRKKEMAKQKAAPEAKKQKVEATEPTTSFNLFVGNLNFSKSAPEL 270 280 290 300 310 320 360 370 380 390 400 410 bm0236 KTGISDVFAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKG ::::::.::::::::::::::..::::::::::::::::::::::::::::::::::::: gi|592 KTGISDLFAKNDLAVVDVRIGVSRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKG 330 340 350 360 370 380 420 430 440 450 460 470 bm0236 KDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAE :::::.:::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|592 KDSKKDRDARTLLAKNLPYKVTQDELKEVFEDAVEIRLVSKDGKSKGIAYIEFKTEADAE 390 400 410 420 430 440 480 490 500 510 520 530 bm0236 KTFEEKQGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQ ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|592 KTFEEKQGTEIDGRSISLYYTGEKGQSQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQ 450 460 470 480 490 500 540 550 560 570 580 590 bm0236 EVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|592 EVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGS 510 520 530 540 550 560 600 610 620 630 640 650 bm0236 PNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDA :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|592 PNARSQPSKTLFVKGLSEDTTEETLRESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDA 570 580 590 600 610 620 660 670 680 690 700 710 bm0236 KAAKEAMEDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|592 KAAKEAMEDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGG 630 640 650 660 670 680 720 730 740 bm0236 FGGRGGFRGGRGGGGDHKPQGKKTKFE ::::::::::::::::::::::::::: gi|592 FGGRGGFRGGRGGGGDHKPQGKKTKFE 690 700 710 >>gi|73993958|ref|XP_850477.1| PREDICTED: similar to nuc (699 aa) initn: 3160 init1: 3160 opt: 4197 Z-score: 2919.5 bits: 550.8 E(): 5.6e-154 Smith-Waterman score: 4197; 92.011% identity (98.288% similar) in 701 aa overlap (52-745:1-699) 30 40 50 60 70 80 bm0236 THLRHLSASHSAAIMVKLAKAGKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEV :::::::::::::::::::::.:::::::: gi|739 MAPPPKEVEEDSEDEEMSEDEDDDSSGEEV 10 20 30 90 100 110 120 130 140 bm0236 VIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAAATPAKKTVTPAKAVTT ::::::::::..: ::::.::::::::::::::::.::::::::::::::.:.:::::.: gi|739 VIPQKKGKKATTTPAKKVMVSPTKKVAVATPAKKAVVTPGKKAAATPAKKAVAPAKAVAT 40 50 60 70 80 90 150 160 170 180 190 200 bm0236 PGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDED :::::.:::::::::::::::: :::::::::::::::::::.::::: :::.:::::: gi|739 PGKKGTTPGKALVATPGKKGAATPAKGAKNGKNAKKEDSDEEDDDDSE--EEDEEDEDED 100 110 120 130 140 210 220 230 240 250 bm0236 EDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDD----DDEEDDSEEEAMETTPAKGKKA- :::.::..::::::::::..:.:....:::::: :..::::::::::::::::::: gi|739 EDEFEPTVMKAAAAAPASDEEEDDEEDDDEDDDEEDEDEDEDDSEEEAMETTPAKGKKAP 150 160 170 180 190 200 260 270 280 290 300 310 bm0236 AKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDE--DDEEEEEEEEEEPVKEAPGK .:.::::::..:::::::::::::.:::.:....:::: :.:::::::::::::::::: gi|739 VKAVPVKAKSTAEDEDEEEDDEDEEDDDEEEEDEDDDEEEDEEEEEEEEEEEPVKEAPGK 210 220 230 240 250 260 320 330 340 350 360 370 bm0236 RKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVV ::::::::::::::::::::.:::::.::::::::::.::::::::::::.::::::::: gi|739 RKKEMAKQKAAPEAKKQKVEATEPTTSFNLFVGNLNFSKSAPELKTGISDLFAKNDLAVV 270 280 290 300 310 320 380 390 400 410 420 430 bm0236 DVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKN :::::..::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|739 DVRIGVSRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKDRDARTLLAKN 330 340 350 360 370 380 440 450 460 470 480 490 bm0236 LPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|739 LPYKVTQDELKEVFEDAVEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 390 400 410 420 430 440 500 510 520 530 540 550 bm0236 SLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQN ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SLYYTGEKGQSQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQN 450 460 470 480 490 500 560 570 580 590 600 610 bm0236 GKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGL 510 520 530 540 550 560 620 630 640 650 660 670 bm0236 SEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNK 570 580 590 600 610 620 680 690 700 710 720 730 bm0236 VTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGGGD ::::::::::::::::::::::::::::::: :.:::::::::::::::::::::::::: gi|739 VTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRRGQGGFGGRGRGGFGGRGGFRGGRGGGGD 630 640 650 660 670 680 740 bm0236 HKPQGKKTKFE ::::::::::: gi|739 HKPQGKKTKFE 690 >>gi|193788267|dbj|BAG53161.1| unnamed protein product [ (633 aa) initn: 4119 init1: 4119 opt: 4119 Z-score: 2866.0 bits: 540.7 E(): 5.4e-151 Smith-Waterman score: 4119; 99.684% identity (99.842% similar) in 632 aa overlap (114-745:2-633) 90 100 110 120 130 140 bm0236 PQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAAATPAKKTVTPAKAVTTPG :::::::::::::::::::::::::::::: gi|193 MKKAAVTPGKKAAATPAKKTVTPAKAVTTPG 10 20 30 150 160 170 180 190 200 bm0236 KKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDED :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|193 KKGATPGKALVATPGKKGAAIPAKGAKNGKNAKREDSDEEEDDDSEEDEEDDEDEDEDED 40 50 60 70 80 90 210 220 230 240 250 260 bm0236 EIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 EIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVK 100 110 120 130 140 150 270 280 290 300 310 320 bm0236 AKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 AKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQK 160 170 180 190 200 210 330 340 350 360 370 380 bm0236 AAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 AAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRK 220 230 240 250 260 270 390 400 410 420 430 440 bm0236 FGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 FGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDE 280 290 300 310 320 330 450 460 470 480 490 500 bm0236 LKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 LKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKG 340 350 360 370 380 390 510 520 530 540 550 560 bm0236 QNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 QNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFI 400 410 420 430 440 450 570 580 590 600 610 620 bm0236 EFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETL :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|193 EFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNAGSQPSKTLFVKGLSEDTTEETL 460 470 480 490 500 510 630 640 650 660 670 680 bm0236 KESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 KESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 520 530 540 550 560 570 690 700 710 720 730 740 bm0236 GEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGGGDHKPQGKKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 GEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGGGDHKPQGKKTK 580 590 600 610 620 630 bm0236 FE :: gi|193 FE >>gi|21750187|dbj|BAC03738.1| unnamed protein product [H (687 aa) initn: 4004 init1: 4004 opt: 4062 Z-score: 2826.2 bits: 533.5 E(): 8.9e-149 Smith-Waterman score: 4420; 96.620% identity (96.620% similar) in 710 aa overlap (36-745:1-687) 10 20 30 40 50 60 bm0236 DLQHPRPPSPSLGFFWTHLRHLSASHSAAIMVKLAKAGKNQGDPKKMAPPPKEVEEDSED :::::::::::::::::::::::::::::: gi|217 MVKLAKAGKNQGDPKKMAPPPKEVEEDSED 10 20 30 70 80 90 100 110 120 bm0236 EEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAA ::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 EEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAK----------- 40 50 60 70 130 140 150 160 170 180 bm0236 ATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEED :::::::::::::::::::::::::::::::::::::::::::::::: gi|217 ------------AVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEED 80 90 100 110 120 190 200 210 220 230 240 bm0236 DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 DDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEA 130 140 150 160 170 180 250 260 270 280 290 300 bm0236 METTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 METTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEE 190 200 210 220 230 240 310 320 330 340 350 360 bm0236 EPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 EPVKEAPGKRKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDV 250 260 270 280 290 300 370 380 390 400 410 420 bm0236 FAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 FAKNDLAVVDVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKER 310 320 330 340 350 360 430 440 450 460 470 480 bm0236 DARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 DARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQ 370 380 390 400 410 420 490 500 510 520 530 540 bm0236 GTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 GTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT 430 440 450 460 470 480 550 560 570 580 590 600 bm0236 FIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQP :::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|217 FIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIGGRAIRLELQGPRGSPNARSQP 490 500 510 520 530 540 610 620 630 640 650 660 bm0236 SKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 SKTLFVKGLSEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAM 550 560 570 580 590 600 670 680 690 700 710 720 bm0236 EDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 EDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGF 610 620 630 640 650 660 730 740 bm0236 RGGRGGGGDHKPQGKKTKFE :::::::::::::::::::: gi|217 RGGRGGGGDHKPQGKKTKFE 670 680 >>gi|73993964|ref|XP_861613.1| PREDICTED: similar to nuc (678 aa) initn: 4038 init1: 2900 opt: 3941 Z-score: 2742.5 bits: 518.0 E(): 4.1e-144 Smith-Waterman score: 3999; 89.301% identity (95.435% similar) in 701 aa overlap (52-745:1-678) 30 40 50 60 70 80 bm0236 THLRHLSASHSAAIMVKLAKAGKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEV :::::::::::::::::::::.:::::::: gi|739 MAPPPKEVEEDSEDEEMSEDEDDDSSGEEV 10 20 30 90 100 110 120 130 140 bm0236 VIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAAATPAKKTVTPAKAVTT ::::::::::..: ::::.::::::::::::::::.::::::::::::::.:.:::::.: gi|739 VIPQKKGKKATTTPAKKVMVSPTKKVAVATPAKKAVVTPGKKAAATPAKKAVAPAKAVAT 40 50 60 70 80 90 150 160 170 180 190 200 bm0236 PGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDED :::::.:::::::::::::::: :::::::::::::::::::.::::: :::.:::::: gi|739 PGKKGTTPGKALVATPGKKGAATPAKGAKNGKNAKKEDSDEEDDDDSE--EEDEEDEDED 100 110 120 130 140 210 220 230 240 250 bm0236 EDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDD----DDEEDDSEEEAMETTPAKGKKA- :::.::..::::::::::..:.:....:::::: :..::::::::::::::::::: gi|739 EDEFEPTVMKAAAAAPASDEEEDDEEDDDEDDDEEDEDEDEDDSEEEAMETTPAKGKKAP 150 160 170 180 190 200 260 270 280 290 300 310 bm0236 AKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDE--DDEEEEEEEEEEPVKEAPGK .:.::::::..:::::::::::::.:::.:....:::: :.:::::::::::::::::: gi|739 VKAVPVKAKSTAEDEDEEEDDEDEEDDDEEEEDEDDDEEEDEEEEEEEEEEEPVKEAPGK 210 220 230 240 250 260 320 330 340 350 360 370 bm0236 RKKEMAKQKAAPEAKKQKVEGTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVV ::::::::::::::::::::.:::::.::::::::::.::::::::::::.::::::::: gi|739 RKKEMAKQKAAPEAKKQKVEATEPTTSFNLFVGNLNFSKSAPELKTGISDLFAKNDLAVV 270 280 290 300 310 320 380 390 400 410 420 430 bm0236 DVRIGMTRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKN :::::..::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|739 DVRIGVSRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKDRDARTLLAKN 330 340 350 360 370 380 440 450 460 470 480 490 bm0236 LPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|739 LPYKVTQDELKEVFEDAVEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSI 390 400 410 420 430 440 500 510 520 530 540 550 bm0236 SLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQN ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SLYYTGEKGQSQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQN 450 460 470 480 490 500 560 570 580 590 600 610 bm0236 GKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGL 510 520 530 540 550 560 620 630 640 650 660 670 bm0236 SEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SEDTTEETLKESFDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNK 570 580 590 600 610 620 680 690 700 710 720 730 bm0236 VTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFGGRGGFRGGRGGGGD :::::::::::::::::::::::::::: ::::::::::: gi|739 VTLDWAKPKGEGGFGGRGGGRGGFGGRG---------------------GFRGGRGGGGD 630 640 650 660 740 bm0236 HKPQGKKTKFE ::::::::::: gi|739 HKPQGKKTKFE 670 745 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 12:19:41 2008 done: Thu Aug 7 12:21:48 2008 Total Scan time: 966.720 Total Display time: 0.320 Function used was FASTA [version 34.26.5 April 26, 2007]