hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-12214877/chunk_1/iprscan-20080807-12214877.nocrc
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Query sequence: bm02364
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                 269.1    3.4e-76   4
SM00361                                                  26.2     0.0044   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/4     343   414 ..     1   121 []    40.6  2.2e-07
SM00360    2/4     429   497 ..     1   121 []    63.7  2.3e-14
SM00360    3/4     522   591 ..     1   121 []    77.7  1.4e-18
SM00361    1/2     522   591 ..     1    91 []    18.3      0.4
SM00361    2/2     608   678 ..     1    91 []     8.0        4
SM00360    4/4     608   678 ..     1   121 []    87.2    2e-21

Alignments of top-scoring domains:
SM00360: domain 1 of 4, from 343 to 414: score 40.6, E = 2.2e-07
                   *->tlfVgNLn..dppdvteedLrelF.kevksvevfraeteskfGkvvs
                      +lfVgNLn +++    +  + ++F k             +    vv+
     bm02364   343    NLFVGNLNfnKSAPELKTGISDVFaK-------------NDLA-VVD 375  

                   vrivrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekA
                   vri + ++                           f++V+Fe++ed ekA
     bm02364   376 VRIGMTRK---------------------------FGYVDFESAEDLEKA 398  

                   lliealnaskGkeledgGrptlglrVe<-*
                     +e+ +     ++   G++   +++e   
     bm02364   399 --LELTG----LKV--FGNE---IKLE    414  

SM00360: domain 2 of 4, from 429 to 497: score 63.7, E = 2.3e-14
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      tl  +NL  p++vt+++L+e+F              +   +++ v  
     bm02364   429    TLLAKNL--PYKVTQDELKEVF--------------EDAAEIRLVS- 458  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                    +d                        GkskG a++eF++e+dAek    
     bm02364   459 -KD------------------------GKSKGIAYIEFKTEADAEKT--F 481  

                   ealnaskGkeledgGrptlglrVe<-*
                   e+ +   G+e+  +Gr    + +    
     bm02364   482 EEKQ---GTEI--DGRS---ISLY    497  

SM00360: domain 3 of 4, from 522 to 591: score 77.7, E = 1.4e-18
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      tl  +NL  ++++tee L+e+F                  k + +++
     bm02364   522    TLVLSNL--SYSATEETLQEVF-----------------EKATFIKV 549  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   + + +                      GkskG+aF+eF++ edA+ A  +
     bm02364   550 PQNQN----------------------GKSKGYAFIEFASFEDAKEA--L 575  

                   ealnaskGkeledgGrptlglrVe<-*
                   +  n   ++e+  +Gr    +r+e   
     bm02364   576 NSCN---KREI--EGRA---IRLE    591  

SM00361: domain 1 of 2, from 522 to 591: score 18.3, E = 0.4
                   *->lvlvnglvspeeakdEdferelseeeeyfgevgkinKivinkvtkrl
                       +++++l s     +E++++++        e++  +K+ +n  +k  
     bm02364   522    TLVLSNL-SYSAT-EETLQEVF--------EKATFIKVPQNQNGK-- 556  

                   NayenhkrgsggvYitFFersEDAarAivdlnGryfdGRtlkae<-*
                         ++g+  ++i+F  + EDA+ A+   n r   GR ++ e   
     bm02364   557 ------SKGY--AFIEF-ASFEDAKEALNSCNKREIEGRAIRLE    591  

SM00361: domain 2 of 2, from 608 to 678: score 8.0, E = 4
                   *->lvlvnglvspeeakdEdferelseeeeyfgevgkinKivinkvtkrl
                       ++v gl s     +E++++ ++      g v+    iv +++t   
     bm02364   608    TLFVKGL-SEDTT-EETLKESFD------GSVRAR--IVTDRET--- 641  

                   NayenhkrgsggvYitFFersEDAarAivdlnGryfdGRtlkae<-*
                       ++++g    ++ F  ++EDA++A+++  ++  dG  ++     
     bm02364   642 ----GSSKGF--GFVDF-NSEEDAKAAKEAMEDGEIDGNKVTLD    678  

SM00360: domain 4 of 4, from 608 to 678: score 87.2, E = 2e-21
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      tlfV++L  ++d+tee L+e F                 G v ++ri
     bm02364   608    TLFVKGL--SEDTTEETLKESF----------------DGSV-RARI 635  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   v+d++                     TG skGf+FV+F +eedA++A   
     bm02364   636 VTDRE---------------------TGSSKGFGFVDFNSEEDAKAA--K 662  

                   ealnaskGkeledgGrptlglrVe<-*
                   ea+      e+  +G++   ++++   
     bm02364   663 EAME---DGEI--DGNK---VTLD    678  

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