# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm02387.fasta.nr -Q bm02387.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm02387, 511 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6818083 sequences Expectation_n fit: rho(ln(x))= 5.1046+/-0.000187; mu= 12.7186+/- 0.010 mean_var=77.3292+/-15.538, 0's: 40 Z-trim: 82 B-trim: 1918 in 1/64 Lambda= 0.145849 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089028|dbj|BAD92961.1| thioredoxin reductase ( 511) 3468 739.2 5.5e-211 gi|13486926|dbj|BAA77601.2| thioredoxin reductase ( 524) 3464 738.3 1e-210 gi|4378531|gb|AAD19597.1| thioredoxin reductase [H ( 524) 3462 737.9 1.3e-210 gi|4584859|gb|AAD25167.1|AF044212_1 thioredoxin re ( 521) 3458 737.1 2.4e-210 gi|182705230|sp|Q9NNW7.3|TRXR2_HUMAN Thioredoxin r ( 524) 3458 737.1 2.4e-210 gi|12043738|gb|AAG47635.1|AF201385_1 mitochondrial ( 521) 3447 734.8 1.2e-209 gi|109093282|ref|XP_001105541.1| PREDICTED: simila ( 521) 3411 727.2 2.3e-207 gi|109658718|gb|AAI17355.1| TXNRD2 protein [Homo s ( 492) 3306 705.1 9.7e-201 gi|13486927|dbj|BAA77602.2| thioredoxin reductase ( 494) 3306 705.1 9.7e-201 gi|48257067|gb|AAH07489.3| TXNRD2 protein [Homo sa ( 485) 3269 697.3 2.1e-198 gi|114685128|ref|XP_001166615.1| PREDICTED: simila ( 481) 3162 674.8 1.3e-191 gi|84579105|dbj|BAE72986.1| hypothetical protein [ ( 499) 3134 668.9 7.7e-190 gi|119623418|gb|EAX03013.1| hCG17888, isoform CRA_ ( 503) 3048 650.8 2.2e-184 gi|119623419|gb|EAX03014.1| hCG17888, isoform CRA_ ( 473) 3034 647.8 1.6e-183 gi|114685130|ref|XP_514983.2| PREDICTED: thioredox ( 450) 3021 645.1 1e-182 gi|73995917|ref|XP_850181.1| PREDICTED: similar to ( 509) 3018 644.5 1.7e-182 gi|13486929|dbj|BAA86986.2| thioredoxin reductase ( 520) 2988 638.2 1.4e-180 gi|182705231|sp|Q9JLT4.4|TRXR2_MOUSE Thioredoxin r ( 524) 2988 638.2 1.4e-180 gi|148665108|gb|EDK97524.1| thioredoxin reductase ( 525) 2988 638.2 1.4e-180 gi|19548173|gb|AAL90457.1| thioredoxin reductase [ ( 527) 2988 638.2 1.4e-180 gi|6090837|gb|AAF03359.1|AF136399_1 thioredoxin re ( 528) 2988 638.2 1.4e-180 gi|149758691|ref|XP_001488273.1| PREDICTED: simila ( 489) 2968 633.9 2.5e-179 gi|149019795|gb|EDL77943.1| thioredoxin reductase ( 524) 2945 629.1 7.5e-178 gi|172045556|sp|Q9Z0J5.3|TRXR2_RAT Thioredoxin red ( 526) 2945 629.1 7.5e-178 gi|82407582|pdb|1ZDL|A Chain A, Crystal Structure ( 517) 2941 628.3 1.3e-177 gi|119623421|gb|EAX03016.1| hCG17888, isoform CRA_ ( 426) 2880 615.4 8.4e-174 gi|6649225|gb|AAF21432.1|AF166127_1 selenoprotein ( 428) 2880 615.4 8.4e-174 gi|190359067|sp|Q9N2I8.2|TRXR2_BOVIN Thioredoxin r ( 511) 2864 612.1 9.9e-173 gi|119623420|gb|EAX03015.1| hCG17888, isoform CRA_ ( 463) 2777 593.7 3e-167 gi|193783606|dbj|BAG53517.1| unnamed protein produ ( 463) 2763 590.8 2.3e-166 gi|114685132|ref|XP_001166546.1| PREDICTED: thiore ( 463) 2763 590.8 2.3e-166 gi|170015974|ref|NP_001116163.1| thioredoxin reduc ( 518) 2630 562.8 6.6e-158 gi|33416815|gb|AAH56136.1| Txnrd2 protein [Xenopus ( 502) 2536 543.1 5.8e-152 gi|148277083|ref|NP_001080052.1| thioredoxin reduc ( 504) 2536 543.1 5.9e-152 gi|170284705|gb|AAI61360.1| Unknown (protein for M ( 502) 2527 541.2 2.2e-151 gi|33309917|gb|AAQ03230.1|AF412308_1 mitochondrial ( 496) 2190 470.3 4.8e-130 gi|148665110|gb|EDK97526.1| thioredoxin reductase ( 498) 2190 470.3 4.8e-130 gi|133777239|gb|AAH99923.1| TXNRD2 protein [Homo s ( 338) 2080 447.0 3.3e-123 gi|115725117|ref|XP_797733.2| PREDICTED: hypotheti ( 490) 2013 433.0 7.7e-119 gi|126344393|ref|XP_001362937.1| PREDICTED: simila ( 503) 1976 425.2 1.7e-116 gi|42627293|emb|CAF29507.1| hypothetical protein [ ( 306) 1933 416.0 6.3e-114 gi|91079422|ref|XP_975772.1| PREDICTED: similar to ( 492) 1926 414.7 2.5e-113 gi|114685134|ref|XP_001166507.1| PREDICTED: hypoth ( 306) 1922 413.7 3.1e-113 gi|156548334|ref|XP_001603220.1| PREDICTED: simila ( 539) 1915 412.4 1.3e-112 gi|33089108|gb|AAP93583.1| thioredoxin reductase [ ( 485) 1909 411.1 3e-112 gi|48140590|ref|XP_393517.1| PREDICTED: similar to ( 518) 1909 411.1 3.1e-112 gi|28865108|emb|CAD70158.1| thioredoxin-disulfide ( 505) 1908 410.9 3.5e-112 gi|110748925|ref|XP_623425.2| PREDICTED: similar t ( 491) 1907 410.7 4e-112 gi|194117352|gb|EDW39395.1| GL23230 [Drosophila pe ( 512) 1902 409.7 8.5e-112 gi|190581507|gb|EDV21583.1| hypothetical protein T ( 522) 1902 409.7 8.7e-112 >>gi|62089028|dbj|BAD92961.1| thioredoxin reductase 2 is (511 aa) initn: 3468 init1: 3468 opt: 3468 Z-score: 3943.1 bits: 739.2 E(): 5.5e-211 Smith-Waterman score: 3468; 100.000% identity (100.000% similar) in 511 aa overlap (1-511:1-511) 10 20 30 40 50 60 bm0238 GGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQLGRKVSVVDYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQLGRKVSVVDYV 10 20 30 40 50 60 70 80 90 100 110 120 bm0238 EPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEA 70 80 90 100 110 120 130 140 150 160 170 180 bm0238 VQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGR 130 140 150 160 170 180 190 200 210 220 230 240 bm0238 PRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSI 190 200 210 220 230 240 250 260 270 280 290 300 bm0238 PLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDT 250 260 270 280 290 300 310 320 330 340 350 360 bm0238 VLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPTA 310 320 330 340 350 360 370 380 390 400 410 420 bm0238 IMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHY 370 380 390 400 410 420 430 440 450 460 470 480 bm0238 KPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVM 430 440 450 460 470 480 490 500 510 bm0238 RTVGIHPTCSEEVVKLRISKRSGLDPTVTGC ::::::::::::::::::::::::::::::: gi|620 RTVGIHPTCSEEVVKLRISKRSGLDPTVTGC 490 500 510 >>gi|13486926|dbj|BAA77601.2| thioredoxin reductase II a (524 aa) initn: 3464 init1: 3464 opt: 3464 Z-score: 3938.4 bits: 738.3 E(): 1e-210 Smith-Waterman score: 3464; 99.804% identity (100.000% similar) in 511 aa overlap (1-511:12-522) 10 20 30 40 bm0238 GGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQ ::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQ 10 20 30 40 50 60 50 60 70 80 90 100 bm0238 LGRKVSVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQP :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQP 70 80 90 100 110 120 110 120 130 140 150 160 bm0238 VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS 130 140 150 160 170 180 170 180 190 200 210 220 bm0238 ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI 190 200 210 220 230 240 230 240 250 260 270 280 bm0238 GLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 GLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDST 250 260 270 280 290 300 290 300 310 320 330 340 bm0238 TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDV 310 320 330 340 350 360 350 360 370 380 390 400 bm0238 VEGRPELTPTAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 VEGRPELTPTAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG 370 380 390 400 410 420 410 420 430 440 450 460 bm0238 QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG 430 440 450 460 470 480 470 480 490 500 510 bm0238 IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGC :::::::::::::::::::::::::::::::::::::::::: gi|134 IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGCXG 490 500 510 520 >>gi|4378531|gb|AAD19597.1| thioredoxin reductase [Homo (524 aa) initn: 3462 init1: 3462 opt: 3462 Z-score: 3936.1 bits: 737.9 E(): 1.3e-210 Smith-Waterman score: 3462; 99.804% identity (99.804% similar) in 511 aa overlap (1-511:12-522) 10 20 30 40 bm0238 GGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQ ::::::::::::::::::::::::::::::::::::::::::::::::: gi|437 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQ 10 20 30 40 50 60 50 60 70 80 90 100 bm0238 LGRKVSVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|437 LGRKVSVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQP 70 80 90 100 110 120 110 120 130 140 150 160 bm0238 VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|437 VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS 130 140 150 160 170 180 170 180 190 200 210 220 bm0238 ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|437 ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI 190 200 210 220 230 240 230 240 250 260 270 280 bm0238 GLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|437 GLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDST 250 260 270 280 290 300 290 300 310 320 330 340 bm0238 TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|437 TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDV 310 320 330 340 350 360 350 360 370 380 390 400 bm0238 VEGRPELTPTAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|437 VEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG 370 380 390 400 410 420 410 420 430 440 450 460 bm0238 QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|437 QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG 430 440 450 460 470 480 470 480 490 500 510 bm0238 IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGC :::::::::::::::::::::::::::::::::::::::::: gi|437 IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGCXG 490 500 510 520 >>gi|4584859|gb|AAD25167.1|AF044212_1 thioredoxin reduct (521 aa) initn: 3458 init1: 3458 opt: 3458 Z-score: 3931.6 bits: 737.1 E(): 2.4e-210 Smith-Waterman score: 3458; 99.609% identity (99.804% similar) in 511 aa overlap (1-511:9-519) 10 20 30 40 50 bm0238 GGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQLGR :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|458 MAVALRGLGGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQLGR 10 20 30 40 50 60 60 70 80 90 100 110 bm0238 KVSVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPH ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|458 KVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPH 70 80 90 100 110 120 120 130 140 150 160 170 bm0238 DWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|458 DWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADH 130 140 150 160 170 180 180 190 200 210 220 230 bm0238 IIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|458 IIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLD 190 200 210 220 230 240 240 250 260 270 280 290 bm0238 TTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|458 TTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGK 250 260 270 280 290 300 300 310 320 330 340 350 bm0238 EDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|458 EDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEG 310 320 330 340 350 360 360 370 380 390 400 410 bm0238 RPELTPTAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEH :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|458 RPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEH 370 380 390 400 410 420 420 430 440 450 460 470 bm0238 VEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|458 VEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKC 430 440 450 460 470 480 480 490 500 510 bm0238 GASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGC ::::::::::::::::::::::::::::::::::::::: gi|458 GASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGCXG 490 500 510 520 >>gi|182705230|sp|Q9NNW7.3|TRXR2_HUMAN Thioredoxin reduc (524 aa) initn: 3458 init1: 3458 opt: 3458 Z-score: 3931.5 bits: 737.1 E(): 2.4e-210 Smith-Waterman score: 3458; 99.609% identity (99.804% similar) in 511 aa overlap (1-511:12-522) 10 20 30 40 bm0238 GGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQ ::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQ 10 20 30 40 50 60 50 60 70 80 90 100 bm0238 LGRKVSVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQP :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 LGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQP 70 80 90 100 110 120 110 120 130 140 150 160 bm0238 VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS 130 140 150 160 170 180 170 180 190 200 210 220 bm0238 ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI 190 200 210 220 230 240 230 240 250 260 270 280 bm0238 GLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 GLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDST 250 260 270 280 290 300 290 300 310 320 330 340 bm0238 TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDV 310 320 330 340 350 360 350 360 370 380 390 400 bm0238 VEGRPELTPTAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 VEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG 370 380 390 400 410 420 410 420 430 440 450 460 bm0238 QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG 430 440 450 460 470 480 470 480 490 500 510 bm0238 IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGC :::::::::::::::::::::::::::::::::::::::::: gi|182 IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGCXG 490 500 510 520 >>gi|12043738|gb|AAG47635.1|AF201385_1 mitochondrial thi (521 aa) initn: 3311 init1: 3311 opt: 3447 Z-score: 3919.1 bits: 734.8 E(): 1.2e-209 Smith-Waterman score: 3447; 99.609% identity (99.804% similar) in 511 aa overlap (1-511:12-521) 10 20 30 40 bm0238 GGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQ ::::::::::::::::::::::: ::::::::::::::::::::::::: gi|120 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAA-GQRDYDLLVVGGGSGGLACAKEAAQ 10 20 30 40 50 50 60 70 80 90 100 bm0238 LGRKVSVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 LGRKVSVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQP 60 70 80 90 100 110 110 120 130 140 150 160 bm0238 VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS 120 130 140 150 160 170 170 180 190 200 210 220 bm0238 ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI 180 190 200 210 220 230 230 240 250 260 270 280 bm0238 GLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDST ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|120 GLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVKRLPDGQLQVTWEDST 240 250 260 270 280 290 290 300 310 320 330 340 bm0238 TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDV 300 310 320 330 340 350 350 360 370 380 390 400 bm0238 VEGRPELTPTAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 VEGRPELTPTAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG 360 370 380 390 400 410 410 420 430 440 450 460 bm0238 QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG 420 430 440 450 460 470 470 480 490 500 510 bm0238 IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGC :::::::::::::::::::::::::::::::::::::::::: gi|120 IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGC 480 490 500 510 520 >>gi|109093282|ref|XP_001105541.1| PREDICTED: similar to (521 aa) initn: 3275 init1: 3275 opt: 3411 Z-score: 3878.1 bits: 727.2 E(): 2.3e-207 Smith-Waterman score: 3411; 98.043% identity (99.609% similar) in 511 aa overlap (1-511:12-521) 10 20 30 40 bm0238 GGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQ ::::::::::::::::::::::: :::::::::.::::::::::::::: gi|109 MAAMAVALRGLGGRFRWRTQAVAGGVRGAARGAA-GQRDYDLLVIGGGSGGLACAKEAAQ 10 20 30 40 50 50 60 70 80 90 100 bm0238 LGRKVSVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQP :::::.:::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|109 LGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPHYGWEVAQP 60 70 80 90 100 110 110 120 130 140 150 160 bm0238 VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLS 120 130 140 150 160 170 170 180 190 200 210 220 bm0238 ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGI 180 190 200 210 220 230 230 240 250 260 270 280 bm0238 GLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDST :::::.:.:::::::::::::::::::::::::.::::::::::::::::.::::::: : gi|109 GLDTTVMIRSIPLRGFDQQMSSMVIEHMASHGTQFLRGCAPSRVRRLPDGHLQVTWEDCT 240 250 260 270 280 290 290 300 310 320 330 340 bm0238 TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDV :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|109 TGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREGTSVPHIYAIGDV 300 310 320 330 340 350 350 360 370 380 390 400 bm0238 VEGRPELTPTAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VEGRPELTPTAIMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHG 360 370 380 390 400 410 410 420 430 440 450 460 bm0238 QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QEHVEVYHAHYKPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALG 420 430 440 450 460 470 470 480 490 500 510 bm0238 IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGC :::::::::::::::::::::::::::::::::::::::::: gi|109 IKCGASYAQVMRTVGIHPTCSEEVVKLRISKRSGLDPTVTGC 480 490 500 510 520 >>gi|109658718|gb|AAI17355.1| TXNRD2 protein [Homo sapie (492 aa) initn: 3306 init1: 3306 opt: 3306 Z-score: 3759.1 bits: 705.1 E(): 9.7e-201 Smith-Waterman score: 3306; 99.795% identity (100.000% similar) in 488 aa overlap (24-511:5-492) 10 20 30 40 50 60 bm0238 GGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQLGRKVSVVDYV :::::::::::::::::::::::::::::::.::::: gi|109 MEDQAGQRDYDLLVVGGGSGGLACAKEAAQLGRKVAVVDYV 10 20 30 40 70 80 90 100 110 120 bm0238 EPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEA 50 60 70 80 90 100 130 140 150 160 170 180 bm0238 VQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGR 110 120 130 140 150 160 190 200 210 220 230 240 bm0238 PRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSI 170 180 190 200 210 220 250 260 270 280 290 300 bm0238 PLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDT 230 240 250 260 270 280 310 320 330 340 350 360 bm0238 VLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPTA 290 300 310 320 330 340 370 380 390 400 410 420 bm0238 IMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHY 350 360 370 380 390 400 430 440 450 460 470 480 bm0238 KPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVM 410 420 430 440 450 460 490 500 510 bm0238 RTVGIHPTCSEEVVKLRISKRSGLDPTVTGC ::::::::::::::::::::::::::::::: gi|109 RTVGIHPTCSEEVVKLRISKRSGLDPTVTGC 470 480 490 >>gi|13486927|dbj|BAA77602.2| thioredoxin reductase II b (494 aa) initn: 3306 init1: 3306 opt: 3306 Z-score: 3759.0 bits: 705.1 E(): 9.7e-201 Smith-Waterman score: 3306; 99.795% identity (100.000% similar) in 488 aa overlap (24-511:5-492) 10 20 30 40 50 60 bm0238 GGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQLGRKVSVVDYV :::::::::::::::::::::::::::::::.::::: gi|134 MEDQAGQRDYDLLVVGGGSGGLACAKEAAQLGRKVAVVDYV 10 20 30 40 70 80 90 100 110 120 bm0238 EPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 EPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEA 50 60 70 80 90 100 130 140 150 160 170 180 bm0238 VQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 VQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGR 110 120 130 140 150 160 190 200 210 220 230 240 bm0238 PRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 PRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSI 170 180 190 200 210 220 250 260 270 280 290 300 bm0238 PLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 PLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDT 230 240 250 260 270 280 310 320 330 340 350 360 bm0238 VLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 VLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPTA 290 300 310 320 330 340 370 380 390 400 410 420 bm0238 IMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 IMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHY 350 360 370 380 390 400 430 440 450 460 470 480 bm0238 KPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 KPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVM 410 420 430 440 450 460 490 500 510 bm0238 RTVGIHPTCSEEVVKLRISKRSGLDPTVTGC ::::::::::::::::::::::::::::::: gi|134 RTVGIHPTCSEEVVKLRISKRSGLDPTVTGCXG 470 480 490 >>gi|48257067|gb|AAH07489.3| TXNRD2 protein [Homo sapien (485 aa) initn: 3269 init1: 3269 opt: 3269 Z-score: 3717.1 bits: 697.3 E(): 2.1e-198 Smith-Waterman score: 3269; 99.793% identity (99.793% similar) in 483 aa overlap (29-511:1-483) 10 20 30 40 50 60 bm0238 GGRFRWRTQAVAGGVRGAARGAAAGQRDYDLLVVGGGSGGLACAKEAAQLGRKVSVVDYV :::::::::::::::::::::::::::::::: gi|482 YDLLVVGGGSGGLACAKEAAQLGRKVSVVDYV 10 20 30 70 80 90 100 110 120 bm0238 EPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 EPSPQGTRWGLGGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEA 40 50 60 70 80 90 130 140 150 160 170 180 bm0238 VQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 VQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGR 100 110 120 130 140 150 190 200 210 220 230 240 bm0238 PRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 PRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIMMRSI 160 170 180 190 200 210 250 260 270 280 290 300 bm0238 PLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 PLRGFDQQMSSMVIEHMASHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTTGKEDTGTFDT 220 230 240 250 260 270 310 320 330 340 350 360 bm0238 VLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|482 VLWAIGRVPDTRSLNLEKAGVDTSPDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIA 280 290 300 310 320 330 370 380 390 400 410 420 bm0238 IMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 IMAGRLLVQRLFGGSSDLMDYDNVPTTVFTPLEYGCVGLSEEEAVARHGQEHVEVYHAHY 340 350 360 370 380 390 430 440 450 460 470 480 bm0238 KPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 KPLEFTVAGRDASQCYVKMVCLREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVM 400 410 420 430 440 450 490 500 510 bm0238 RTVGIHPTCSEEVVKLRISKRSGLDPTVTGC ::::::::::::::::::::::::::::::: gi|482 RTVGIHPTCSEEVVKLRISKRSGLDPTVTGCXG 460 470 480 511 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 12:25:24 2008 done: Thu Aug 7 12:27:44 2008 Total Scan time: 885.620 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]