hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-12332184/chunk_1/iprscan-20080807-12332184.nocrc
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Query sequence: bm02392
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00753                                                 247.9    8.1e-70   1
SM00088                                                 105.6    5.7e-27   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00753    1/1     227   399 ..     1   186 []   247.9  8.1e-70
SM00088    1/1     399   489 ..     1    92 []   105.6  5.7e-27

Alignments of top-scoring domains:
SM00753: domain 1 of 1, from 227 to 399: score 247.9, E = 8.1e-70
                   *->ylealelrstllrelrtadlKkdelgllvlvnLllSkiYlklnnldl
                        +++ +rs+l+++lrta+l++d +g+++l+nLll ++Yl+++++d+
     bm02392   227    LDKLDVVRSFLHARLRTATLRHDADGQATLLNLLL-RNYLHYSLYDQ 272  

                   akallskaarteraslansayappsqqarydyylGrihaleldyktAfsy
                   a++l+sk+ ++e         a ++++ary+yy Gri+a++l+y++A   
     bm02392   273 AEKLVSKSVFPE--------QANNNEWARYLYYTGRIKAIQLEYSEARRT 314  

                   ffeAfrkcpelgsakgfrrqiLkYlilvkLLlgseiiPdrsllrqkkllk
                    + A+rk+p++++ +gf++++ k+li+v+LLlg+  iPdr ++rq+ l +
     bm02392   315 MTNALRKAPQHTA-VGFKQTVHKLLIVVELLLGE--IPDRLQFRQPSLKR 361  

                   tliaykTdlaqAvrnGdLklFekaLqqyedeflkdgiyl<-*
                   +l +y+  l+qAvr G+L++F+++L q+  +f++dg+y+   
     bm02392   362 SLMPYF-LLTQAVRTGNLAKFNQVLDQFGEKFQADGTYT    399  

SM00088: domain 1 of 1, from 399 to 489: score 105.6, E = 5.7e-27
                   *->qhverLqrkiretnllqlsepYPssislsdlakllglsvpeevEklv
                      +++ rL++++++t  +++s +Y s+isl d+a++l+l++pe++E +v
     bm02392   399    TLIIRLRHNVIKTGVRMISLSY-SRISLADIAQKLQLDSPEDAEFIV 444  

                   skaIrdgeisakIDqvngivefeevdpryltsnqlaqlaerlkkl<-*
                   +kaIrdg i+a+I++++g+v   e  ++y+t++++ ++++r++++   
     bm02392   445 AKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFC    489  

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