hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-22112924/chunk_1/iprscan-20090617-22112924.nocrc
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Query sequence: bm02481
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00442 hisS: histidyl-tRNA synthetase                 373.2   1.3e-109   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00442   1/1      69   514 ..     1   446 []   373.2 1.3e-109

Alignments of top-scoring domains:
TIGR00442: domain 1 of 1, from 69 to 514: score 373.2, E = 1.3e-109
                   *->vvdlqkprGtkDwlpgelvyrqwieaklrsvlesygyseirtPifey
                         l++p+Gt+D+ p ++  r+ ++ ++ + ++++g   i+tP+fe 
     bm02481    69    KFVLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFEL 115  

                   telfargigksgdevekelytfkDkggrdlalrpeltapvvrlvaenkll
                    e++ +    +++e++k +y +kD+gg++l+lr++lt+p++r+ a+nkl+
     bm02481   116 KETLMG----KYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKLT 161  

                   lpankplrlyyigpvfryerpql.kGryrefwqfgceviG.sespladae
                         +++y+i++v+r+++p++++Gryref+q++++++G+++ +++dae
     bm02481   162 N-----IKRYHIAKVYRRDNPAMtRGRYREFYQCDFDIAGnFDPMIPDAE 206  

                   vlslaveglkalgleghfklklnhlgilegileyrgaleedv.yltpikd
                   +l +  e+l +l + + f +k+n + il+g++ + g+++   + + + +d
     bm02481   207 CLKIMCEILSSLQIGD-FLVKVNDRRILDGMFAICGVSDSKFrTICSSVD 255  

                   kldkddqerleeeltnplrildekvdellellklkgapeildyl..dell
                   kldk ++e+++ e+ +++++  e +d+++ +++  g+ ++++ l +d  l
     bm02481   256 KLDKVSWEEVKNEMVGEKGLAPEVADRIGDYVQQHGGVSLVEQLlqDPKL 305  

                   deseghfeglkdleelfqlledlgiddlyelnlglarGldyytgtvfeiv
                     +++++egl dl+ lf++l+ +gidd ++++l+larGldyytg+++e v
     bm02481   306 SQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAV 355  

                   tna........lgaqgtvcgGGrydnlveefgg..pptpavGfafGlerl
                   +  ++ + +++  ++g+v++GGryd+lv +f  +++++p+vG ++G+er+
     bm02481   356 LLQtpaqageePLGVGSVAAGGRYDGLVGMFDPkgRKVPCVGLSIGVERI 405  

                   inlldaekpsfplakvvdarvfvlvvglgeealpealrlaeklrealpgi
                   +++++++  +++++  +  ++ vlv++ ++++l+e+l+l+++l++a  gi
     bm02481   406 FSIVEQRLEALEEKIRTT-ETQVLVASAQKKLLEERLKLVSELWDA--GI 452  

                   saelypknngrklkkqfsyadklGarfavvlGeeelkegkvtvkdletgf
                   +ael +k  + kl +q+ y +++G+ +++++Ge elk+g ++++ +++  
     bm02481   453 KAELLYK-KNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSR- 500  

                   eqttlaldelidil<-*
                   e++++ +++l++ +   
     bm02481   501 EEVDVRREDLVEEI    514  

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