# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm02517.fasta.nr -Q bm02517.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm02517, 364 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8984236 sequences Expectation_n fit: rho(ln(x))= 4.6805+/-0.000184; mu= 12.7897+/- 0.010 mean_var=66.4480+/-13.156, 0's: 34 Z-trim: 44 B-trim: 1547 in 1/66 Lambda= 0.157338 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|130310|sp|P10915.2|HPLN1_HUMAN RecName: Full=Hy ( 354) 2486 573.0 3.8e-161 gi|34784736|gb|AAH57808.1| HAPLN1 protein [Homo sa ( 354) 2477 570.9 1.6e-160 gi|114599309|ref|XP_517666.2| PREDICTED: cartilage ( 354) 2477 570.9 1.6e-160 gi|109077867|ref|XP_001112341.1| PREDICTED: cartil ( 354) 2453 565.5 6.9e-159 gi|90075768|dbj|BAE87564.1| unnamed protein produc ( 353) 2433 560.9 1.6e-157 gi|130311|sp|P10859.1|HPLN1_PIG RecName: Full=Hyal ( 354) 2420 558.0 1.2e-156 gi|1709660|sp|P55252.1|HPLN1_BOVIN RecName: Full=H ( 354) 2409 555.5 7e-156 gi|4218976|gb|AAD12253.1| link protein [Mus muscul ( 355) 2404 554.4 1.5e-155 gi|2499842|sp|Q28381.1|HPLN1_HORSE RecName: Full=H ( 354) 2401 553.7 2.5e-155 gi|73952134|ref|XP_849484.1| PREDICTED: similar to ( 354) 2396 552.5 5.4e-155 gi|1346731|sp|P03994.2|HPLN1_RAT RecName: Full=Hya ( 354) 2393 551.9 8.7e-155 gi|9978489|sp|Q9QUP5.1|HPLN1_MOUSE RecName: Full=H ( 356) 2392 551.6 1e-154 gi|118764374|gb|AAI28741.1| Hyaluronan and proteog ( 354) 2389 550.9 1.6e-154 gi|44890689|gb|AAH66853.1| Hyaluronan and proteogl ( 356) 2386 550.3 2.6e-154 gi|126321494|ref|XP_001363211.1| PREDICTED: simila ( 354) 2328 537.1 2.4e-150 gi|149408431|ref|XP_001509283.1| PREDICTED: simila ( 354) 2297 530.1 3.1e-148 gi|130309|sp|P07354.1|HPLN1_CHICK RecName: Full=Hy ( 355) 2165 500.1 3.3e-139 gi|224091677|ref|XP_002190848.1| PREDICTED: hyalur ( 354) 2103 486.0 5.7e-135 gi|189524679|ref|XP_697529.3| PREDICTED: hyalurona ( 353) 1864 431.8 1.2e-118 gi|119616320|gb|EAW95914.1| hyaluronan and proteog ( 300) 1818 421.3 1.5e-115 gi|47228555|emb|CAG05375.1| unnamed protein produc ( 319) 1738 403.1 4.6e-110 gi|149058981|gb|EDM09988.1| hyaluronan and proteog ( 343) 1712 397.3 2.9e-108 gi|148745617|gb|AAI42598.1| Hapln1a protein [Danio ( 328) 1499 348.9 1e-93 gi|190338272|gb|AAI63127.1| Hapln1a protein [Danio ( 328) 1493 347.5 2.6e-93 gi|94732632|emb|CAK11227.1| novel protein similar ( 336) 1469 342.1 1.1e-91 gi|53748888|dbj|BAD52342.1| hyaluronan proteoglyca ( 335) 1450 337.8 2.3e-90 gi|205224|gb|AAA41535.1| link protein (0.8 kd) ( 284) 1428 332.7 6.4e-89 gi|126273826|ref|XP_001370515.1| PREDICTED: simila ( 362) 1364 318.3 1.8e-84 gi|149622117|ref|XP_001521634.1| PREDICTED: simila ( 545) 1359 317.3 5.4e-84 gi|28277320|gb|AAH46259.1| MGC53495 protein [Xenop ( 359) 1347 314.4 2.6e-83 gi|60552295|gb|AAH91610.1| Usp12 protein [Xenopus ( 383) 1346 314.2 3.2e-83 gi|50417764|gb|AAH78043.1| LOC446245 protein [Xeno ( 394) 1343 313.6 5.2e-83 gi|89269891|emb|CAJ83435.1| hyaluronan and proteog ( 359) 1342 313.3 5.7e-83 gi|80477845|gb|AAI08852.1| Unknown (protein for MG ( 359) 1335 311.7 1.7e-82 gi|47226733|emb|CAG07892.1| unnamed protein produc ( 889) 1339 313.0 1.8e-82 gi|194039626|ref|XP_001925657.1| PREDICTED: simila ( 360) 1317 307.6 2.9e-81 gi|209155810|gb|ACI34137.1| Hyaluronan and proteog ( 390) 1317 307.7 3.1e-81 gi|148745013|gb|AAI42410.1| HAPLN3 protein [Bos ta ( 360) 1315 307.2 4e-81 gi|194206305|ref|XP_001916615.1| PREDICTED: simila ( 359) 1313 306.7 5.5e-81 gi|94733594|emb|CAK05354.1| novel protein similar ( 344) 1310 306.0 8.5e-81 gi|109082296|ref|XP_001090582.1| PREDICTED: simila ( 360) 1306 305.1 1.7e-80 gi|56377975|dbj|BAD74165.1| hyaluronan proteoglyca ( 359) 1297 303.1 6.8e-80 gi|73951441|ref|XP_851468.1| PREDICTED: similar to ( 362) 1289 301.3 2.4e-79 gi|126323426|ref|XP_001365936.1| PREDICTED: simila ( 395) 1288 301.1 3e-79 gi|47605734|sp|Q96S86.1|HPLN3_HUMAN RecName: Full= ( 360) 1285 300.4 4.5e-79 gi|158257638|dbj|BAF84792.1| unnamed protein produ ( 360) 1280 299.2 9.9e-79 gi|30349289|gb|AAP22049.1| hyaluronan and proteogl ( 359) 1276 298.3 1.9e-78 gi|47605665|sp|Q80WM5.2|HPLN3_MOUSE RecName: Full= ( 359) 1276 298.3 1.9e-78 gi|114658757|ref|XP_001165450.1| PREDICTED: hyalur ( 360) 1275 298.1 2.2e-78 gi|84569921|gb|AAI10475.1| Hyaluronan and proteogl ( 359) 1273 297.6 3e-78 >>gi|130310|sp|P10915.2|HPLN1_HUMAN RecName: Full=Hyalur (354 aa) initn: 2486 init1: 2486 opt: 2486 Z-score: 3050.3 bits: 573.0 E(): 3.8e-161 Smith-Waterman score: 2486; 100.000% identity (100.000% similar) in 354 aa overlap (11-364:1-354) 10 20 30 40 50 60 bm0251 DVKKILWAIKMKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 MKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF 10 20 30 40 50 70 80 90 100 110 120 bm0251 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG 60 70 80 90 100 110 130 140 150 160 170 180 bm0251 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRY 120 130 140 150 160 170 190 200 210 220 230 240 bm0251 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN 180 190 200 210 220 230 250 260 270 280 290 300 bm0251 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG 240 250 260 270 280 290 310 320 330 340 350 360 bm0251 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF 300 310 320 330 340 350 bm0251 RAYN :::: gi|130 RAYN >>gi|34784736|gb|AAH57808.1| HAPLN1 protein [Homo sapien (354 aa) initn: 2477 init1: 2477 opt: 2477 Z-score: 3039.3 bits: 570.9 E(): 1.6e-160 Smith-Waterman score: 2477; 99.718% identity (99.718% similar) in 354 aa overlap (11-364:1-354) 10 20 30 40 50 60 bm0251 DVKKILWAIKMKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 MKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF 10 20 30 40 50 70 80 90 100 110 120 bm0251 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG 60 70 80 90 100 110 130 140 150 160 170 180 bm0251 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRY 120 130 140 150 160 170 190 200 210 220 230 240 bm0251 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN 180 190 200 210 220 230 250 260 270 280 290 300 bm0251 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|347 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDVAVQACLNDGAQIAKVG 240 250 260 270 280 290 310 320 330 340 350 360 bm0251 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF 300 310 320 330 340 350 bm0251 RAYN :::: gi|347 RAYN >>gi|114599309|ref|XP_517666.2| PREDICTED: cartilage lin (354 aa) initn: 2477 init1: 2477 opt: 2477 Z-score: 3039.3 bits: 570.9 E(): 1.6e-160 Smith-Waterman score: 2477; 99.435% identity (100.000% similar) in 354 aa overlap (11-364:1-354) 10 20 30 40 50 60 bm0251 DVKKILWAIKMKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF 10 20 30 40 50 70 80 90 100 110 120 bm0251 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG 60 70 80 90 100 110 130 140 150 160 170 180 bm0251 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRY :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|114 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTAVVALDLQGVVFPYFPRLGRY 120 130 140 150 160 170 190 200 210 220 230 240 bm0251 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN 180 190 200 210 220 230 250 260 270 280 290 300 bm0251 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG 240 250 260 270 280 290 310 320 330 340 350 360 bm0251 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|114 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTESAVRFVGFPDKKHKLYGVYCF 300 310 320 330 340 350 bm0251 RAYN :::: gi|114 RAYN >>gi|109077867|ref|XP_001112341.1| PREDICTED: cartilage (354 aa) initn: 2453 init1: 2453 opt: 2453 Z-score: 3009.8 bits: 565.5 E(): 6.9e-159 Smith-Waterman score: 2453; 98.023% identity (100.000% similar) in 354 aa overlap (11-364:1-354) 10 20 30 40 50 60 bm0251 DVKKILWAIKMKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF ::::::::::::::::::::::::::::.::.::::::.::::::::::: gi|109 MKSLLLLVLISICWADHLSDNYTLDHDRVIHLQAENGPRLLVEAEQAKVF 10 20 30 40 50 70 80 90 100 110 120 bm0251 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG 60 70 80 90 100 110 130 140 150 160 170 180 bm0251 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRY :::::::::.:::::::::::::::::::::::::::::.:::::::::::::::::::: gi|109 RVFLKGGSDNDASLVITDLTLEDYGRYKCEVIEGLEDDTAVVALDLQGVVFPYFPRLGRY 120 130 140 150 160 170 190 200 210 220 230 240 bm0251 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN 180 190 200 210 220 230 250 260 270 280 290 300 bm0251 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|109 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIARVG 240 250 260 270 280 290 310 320 330 340 350 360 bm0251 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QIFAAWKLLGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF 300 310 320 330 340 350 bm0251 RAYN :::: gi|109 RAYN >>gi|90075768|dbj|BAE87564.1| unnamed protein product [M (353 aa) initn: 2431 init1: 2231 opt: 2433 Z-score: 2985.3 bits: 560.9 E(): 1.6e-157 Smith-Waterman score: 2433; 97.740% identity (99.718% similar) in 354 aa overlap (11-364:1-353) 10 20 30 40 50 60 bm0251 DVKKILWAIKMKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF ::::::::::::::::::::::::::::.::.: ::::.::::::::::: gi|900 MKSLLLLVLISICWADHLSDNYTLDHDRVIHLQ-ENGPRLLVEAEQAKVF 10 20 30 40 70 80 90 100 110 120 bm0251 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG 50 60 70 80 90 100 130 140 150 160 170 180 bm0251 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRY :::::::::.:::::::::::::::::::::::::::::.:::::::::::::::::::: gi|900 RVFLKGGSDNDASLVITDLTLEDYGRYKCEVIEGLEDDTAVVALDLQGVVFPYFPRLGRY 110 120 130 140 150 160 190 200 210 220 230 240 bm0251 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|900 NLNFHEAQQACLDQDAVIASFDRLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN 170 180 190 200 210 220 250 260 270 280 290 300 bm0251 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG 230 240 250 260 270 280 310 320 330 340 350 360 bm0251 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 QIFAAWKLLGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF 290 300 310 320 330 340 bm0251 RAYN :::: gi|900 RAYN 350 >>gi|130311|sp|P10859.1|HPLN1_PIG RecName: Full=Hyaluron (354 aa) initn: 2420 init1: 2420 opt: 2420 Z-score: 2969.4 bits: 558.0 E(): 1.2e-156 Smith-Waterman score: 2420; 96.328% identity (99.435% similar) in 354 aa overlap (11-364:1-354) 10 20 30 40 50 60 bm0251 DVKKILWAIKMKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF :::::::::::.:::::::.::::::::.:::::::::.::::::::::: gi|130 MKSLLLLVLISVCWADHLSNNYTLDHDRVIHIQAENGPRLLVEAEQAKVF 10 20 30 40 50 70 80 90 100 110 120 bm0251 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG :::::::::::::.::::::::: ::::::::::::::::::::::::::::::::::.: gi|130 SHRGGNVTLPCKFFRDPTAFGSGTHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYHG 60 70 80 90 100 110 130 140 150 160 170 180 bm0251 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRY :::::::::.:::::::::::::::::::::::::::::.::::::.::::::::::::: gi|130 RVFLKGGSDNDASLVITDLTLEDYGRYKCEVIEGLEDDTAVVALDLEGVVFPYFPRLGRY 120 130 140 150 160 170 190 200 210 220 230 240 bm0251 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN 180 190 200 210 220 230 250 260 270 280 290 300 bm0251 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG 240 250 260 270 280 290 310 320 330 340 350 360 bm0251 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF :::::::.::::::::::::::::::::::::::: :.:::::::::::::::::::::: gi|130 QIFAAWKLLGYDRCDAGWLADGSVRYPISRPRRRCRPNEAAVRFVGFPDKKHKLYGVYCF 300 310 320 330 340 350 bm0251 RAYN :::: gi|130 RAYN >>gi|1709660|sp|P55252.1|HPLN1_BOVIN RecName: Full=Hyalu (354 aa) initn: 2409 init1: 2409 opt: 2409 Z-score: 2955.9 bits: 555.5 E(): 7e-156 Smith-Waterman score: 2409; 96.328% identity (99.435% similar) in 354 aa overlap (11-364:1-354) 10 20 30 40 50 60 bm0251 DVKKILWAIKMKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF :::::::::::.::::: :::::.::::.:::::::::.::::::::::: gi|170 MKSLLLLVLISFCWADHHSDNYTVDHDRVIHIQAENGPRLLVEAEQAKVF 10 20 30 40 50 70 80 90 100 110 120 bm0251 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG :.::::::::::::::::::::: ::::::::::::::::::::::::::::::::::.: gi|170 SRRGGNVTLPCKFYRDPTAFGSGTHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYHG 60 70 80 90 100 110 130 140 150 160 170 180 bm0251 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRY :::::::::.:::::::::::::::::::::::::::::.:::::::::::::::::::: gi|170 RVFLKGGSDNDASLVITDLTLEDYGRYKCEVIEGLEDDTAVVALDLQGVVFPYFPRLGRY 120 130 140 150 160 170 190 200 210 220 230 240 bm0251 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|170 NLNFHEAQQACLDQDAVIASFDQLYDAWRSGLDWCNAGWLSDGSVQYPITKPREPCGGQN 180 190 200 210 220 230 250 260 270 280 290 300 bm0251 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG 240 250 260 270 280 290 310 320 330 340 350 360 bm0251 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF :::::::.:::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|170 QIFAAWKLLGYDRCDAGWLADGSVRYPISRPRRRCSPSEAAVRFVGFPDKKHKLYGVYCF 300 310 320 330 340 350 bm0251 RAYN :::: gi|170 RAYN >>gi|4218976|gb|AAD12253.1| link protein [Mus musculus] (355 aa) initn: 2406 init1: 2278 opt: 2404 Z-score: 2949.7 bits: 554.4 E(): 1.5e-155 Smith-Waterman score: 2404; 96.056% identity (99.437% similar) in 355 aa overlap (11-364:1-355) 10 20 30 40 50 bm0251 DVKKILWAIKMKSLLLLVLISICWADHLSDNYTL-DHDRAIHIQAENGPHLLVEAEQAKV :.:::::::::.::::::::.:: :.::.:::::::::.:::::::::: gi|421 MRSLLLLVLISVCWADHLSDSYTPPDQDRVIHIQAENGPRLLVEAEQAKV 10 20 30 40 50 60 70 80 90 100 110 bm0251 FSHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQ ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|421 FSHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLREVDVFVSMGYHKKTYGGYQ 60 70 80 90 100 110 120 130 140 150 160 170 bm0251 GRVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGR ::::::::::.:::::::::::::::::::::::::::::.::::.:::::::::::::: gi|421 GRVFLKGGSDNDASLVITDLTLEDYGRYKCEVIEGLEDDTAVVALELQGVVFPYFPRLGR 120 130 140 150 160 170 180 190 200 210 220 230 bm0251 YNLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQ ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|421 YNLNFHEARQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQ 180 190 200 210 220 230 240 250 260 270 280 290 bm0251 NTVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|421 NTVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKV 240 250 260 270 280 290 300 310 320 330 340 350 bm0251 GQIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYC ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|421 GQIFAAWKLLGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYC 300 310 320 330 340 350 360 bm0251 FRAYN ::::: gi|421 FRAYN >>gi|2499842|sp|Q28381.1|HPLN1_HORSE RecName: Full=Hyalu (354 aa) initn: 2401 init1: 2401 opt: 2401 Z-score: 2946.1 bits: 553.7 E(): 2.5e-155 Smith-Waterman score: 2401; 96.610% identity (98.870% similar) in 354 aa overlap (11-364:1-354) 10 20 30 40 50 60 bm0251 DVKKILWAIKMKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF ::::::::::::: ::: ::::::::::.:::::::::.::::::::::: gi|249 MKSLLLLVLISICGADHRSDNYTLDHDRVIHIQAENGPRLLVEAEQAKVF 10 20 30 40 50 70 80 90 100 110 120 bm0251 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG ::::::::::::: ::::::::: :::::::::::::::::::::::::::::::::::: gi|249 SHRGGNVTLPCKFLRDPTAFGSGTHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG 60 70 80 90 100 110 130 140 150 160 170 180 bm0251 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRY :::::::::.:::::::::::.:::::::::::::::::.:::::::::::::::::::: gi|249 RVFLKGGSDNDASLVITDLTLDDYGRYKCEVIEGLEDDTAVVALDLQGVVFPYFPRLGRY 120 130 140 150 160 170 190 200 210 220 230 240 bm0251 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN 180 190 200 210 220 230 250 260 270 280 290 300 bm0251 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG :::::::::::::.::::::::::::::::::::::::::::::::::::.::::::::: gi|249 TVPGVRNYGFWDKEKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLKDGAQIAKVG 240 250 260 270 280 290 310 320 330 340 350 360 bm0251 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 QIFAAWKLLGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF 300 310 320 330 340 350 bm0251 RAYN :::: gi|249 RAYN >>gi|73952134|ref|XP_849484.1| PREDICTED: similar to Hya (354 aa) initn: 2396 init1: 2396 opt: 2396 Z-score: 2939.9 bits: 552.5 E(): 5.4e-155 Smith-Waterman score: 2396; 95.480% identity (99.435% similar) in 354 aa overlap (11-364:1-354) 10 20 30 40 50 60 bm0251 DVKKILWAIKMKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEAEQAKVF ::::::::::::::::: ::::::..::.:::::::::.::::::::::: gi|739 MKSLLLLVLISICWADHHSDNYTLNYDRVIHIQAENGPRLLVEAEQAKVF 10 20 30 40 50 70 80 90 100 110 120 bm0251 SHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHKKTYGGYQG ::::::::::::::::::::::: :::::::::::::::::::::::::::.:.:::::: gi|739 SHRGGNVTLPCKFYRDPTAFGSGTHKIRIKWTKLTSDYLKEVDVFVSMGYHRKAYGGYQG 60 70 80 90 100 110 130 140 150 160 170 180 bm0251 RVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVVFPYFPRLGRY ::::::::..::::::.::::::::.:::::::::::::.::::.::::::::::::::: gi|739 RVFLKGGSENDASLVIADLTLEDYGKYKCEVIEGLEDDTAVVALELQGVVFPYFPRLGRY 120 130 140 150 160 170 190 200 210 220 230 240 bm0251 NLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|739 NLNFHEAQQACLDQDAVIASFDQLYEAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGQN 180 190 200 210 220 230 250 260 270 280 290 300 bm0251 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDEAVQACLNDGAQIAKVG 240 250 260 270 280 290 310 320 330 340 350 360 bm0251 QIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QIFAAWKLLGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRFVGFPDKKHKLYGVYCF 300 310 320 330 340 350 bm0251 RAYN :::: gi|739 RAYN 364 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Wed Jun 17 22:14:33 2009 done: Wed Jun 17 22:17:54 2009 Total Scan time: 1036.620 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]