hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-22373783/chunk_1/iprscan-20090617-22373783.nocrc
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Query sequence: bm02547
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
PF08227.2.fs DASH complex subunit Hsk3 like                 71.4    2.9e-20   1
PF08227.2.ls DASH complex subunit Hsk3 like                 73.4    6.6e-19   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
PF08227.2.fs   1/1     184   230 ..     1    47 []    71.4  2.9e-20
PF08227.2.ls   1/1     184   230 ..     1    47 []    73.4  6.6e-19

Alignments of top-scoring domains:
PF08227.2.fs: domain 1 of 1, from 184 to 230: score 71.4, E = 2.9e-20
                   *->qRqysqLasqLaqLqaNLadTeelLettsvQaeawlirkLGkihgSl
                      +R+++qL++++++L++N+a+++e+Le++s+Q+++w++++L+++++++
     bm02547   184    AREKNQLILENEALGRNTAQLSEQLERMSIQCDVWRSKFLASRVMAD 230  

                   <-*
                      
     bm02547     -     -    

PF08227.2.ls: domain 1 of 1, from 184 to 230: score 73.4, E = 6.6e-19
                   *->qRqysqLasqLaqLqaNLadTeelLettsvQaeawlirkLGkihgSl
                      +R+++qL++++++L++N+a+++e+Le++s+Q+++w++++L+++++++
     bm02547   184    AREKNQLILENEALGRNTAQLSEQLERMSIQCDVWRSKFLASRVMAD 230  

                   <-*
                      
     bm02547     -     -    

//