hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-22434519/chunk_1/iprscan-20090617-22434519.nocrc
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Query sequence: bm02579
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07719.7.fs Tetratricopeptide repeat                        97.9    2.2e-26   9
PF07719.7.ls Tetratricopeptide repeat                        97.0    5.2e-26   8
PF00515.18.fs Tetratricopeptide repeat                        87.8    5.6e-24   8
PF00515.18.ls Tetratricopeptide repeat                        81.8      2e-21   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00515.18.ls   2/6      99   132 ..     1    34 []     8.8     0.44
PF00515.18.ls   3/6     145   178 ..     1    34 []    16.7    0.051
PF00515.18.fs   3/8     159   178 ..    15    34 .]    20.4  8.4e-05
PF00515.18.ls   4/6     255   288 ..     1    34 []     8.1     0.53
PF07719.7.ls   5/8     255   288 ..     1    34 []    20.7   0.0048
PF00515.18.fs   5/8     265   288 ..    11    34 .]     8.1     0.27
PF00515.18.fs   7/8     344   369 ..     1    26 [.     8.7     0.19
PF00515.18.ls   5/6     344   377 ..     1    34 []     8.4     0.49
PF00515.18.fs   8/8     441   474 ..     1    34 []    30.9  8.5e-08
PF00515.18.ls   6/6     441   474 ..     1    34 []    32.9    1e-06
PF07719.7.ls   8/8     441   474 ..     1    34 []    28.1  2.9e-05
PF07719.7.fs   9/9     441   474 ..     1    34 []    26.1  2.8e-06

Alignments of top-scoring domains:
PF00515.18.ls: domain 2 of 6, from 99 to 132: score 8.8, E = 0.44
                   *->aeayynlGnaylklgkydeAieayekALeldPnn<-*
                        ++ n ++ y+++g++ eA  +++k+  +  +    
     bm02579    99    LVTWGNFAWMYYHMGRLAEAQTYLDKVENICKKL    132  

PF00515.18.ls: domain 3 of 6, from 145 to 178: score 16.7, E = 0.051
                   *->aeayynlGnaylklgkydeAieayekALeldPnn<-*
                       ++    +++    ++y+ A +++ek+Le+dP+n   
     bm02579   145    IDCEEGWALLKCGGKNYERAKACFEKVLEVDPEN    178  

PF00515.18.fs: domain 3 of 8, from 159 to 178: score 20.4, E = 8.4e-05
                   *->gkydeAieayekALeldPnn<-*
                      ++y+ A +++ek+Le+dP+n   
     bm02579   159    KNYERAKACFEKVLEVDPEN    178  

PF00515.18.ls: domain 4 of 6, from 255 to 288: score 8.1, E = 0.53
                   *->aeayynlGnaylklgkydeAieayekALeldPnn<-*
                        ++   +  y+++g  d+A+e ++kAL+  P+    
     bm02579   255    TYVFRYAAKFYRRKGSVDKALELLKKALQETPTS    288  

PF07719.7.ls: domain 5 of 8, from 255 to 288: score 20.7, E = 0.0048
                   *->aealynlGlayyklgdyeeAleayekAleldPnn<-*
                       ++ ++ ++ y+++g  ++Ale+++kAl+  P+    
     bm02579   255    TYVFRYAAKFYRRKGSVDKALELLKKALQETPTS    288  

PF00515.18.fs: domain 5 of 8, from 265 to 288: score 8.1, E = 0.27
                   *->ylklgkydeAieayekALeldPnn<-*
                      y+++g  d+A+e ++kAL+  P+    
     bm02579   265    YRRKGSVDKALELLKKALQETPTS    288  

PF00515.18.fs: domain 7 of 8, from 344 to 369: score 8.7, E = 0.19
                   *->aeayynlGnaylklgkydeAieayek<-*
                        a+  l+  y + g++ +A+e ++k   
     bm02579   344    EVAHLDLARMYIEAGNHRKAEENFQK    369  

PF00515.18.ls: domain 5 of 6, from 344 to 377: score 8.4, E = 0.49
                   *->aeayynlGnaylklgkydeAieayekALeldPnn<-*
                        a+  l+  y + g++ +A+e ++k L + P     
     bm02579   344    EVAHLDLARMYIEAGNHRKAEENFQKLLCMKPVV    377  

PF00515.18.fs: domain 8 of 8, from 441 to 474: score 30.9, E = 8.5e-08
                   *->aeayynlGnaylklgkydeAieayekALeldPnn<-*
                       e +  lG +y   g+ +eA+e+ye+AL+l  ++   
     bm02579   441    LESLSLLGFVYKLEGNMNEALEYYERALRLAADF    474  

PF00515.18.ls: domain 6 of 6, from 441 to 474: score 32.9, E = 1e-06
                   *->aeayynlGnaylklgkydeAieayekALeldPnn<-*
                       e +  lG +y   g+ +eA+e+ye+AL+l  ++   
     bm02579   441    LESLSLLGFVYKLEGNMNEALEYYERALRLAADF    474  

PF07719.7.ls: domain 8 of 8, from 441 to 474: score 28.1, E = 2.9e-05
                   *->aealynlGlayyklgdyeeAleayekAleldPnn<-*
                       e l +lG +y   g+  eAle+ye+Al+l+ +    
     bm02579   441    LESLSLLGFVYKLEGNMNEALEYYERALRLAADF    474  

PF07719.7.fs: domain 9 of 9, from 441 to 474: score 26.1, E = 2.8e-06
                   *->aealynlGlayyklgdyeeAleayekAleldPnn<-*
                       e l +lG +y   g+  eAle+ye+Al+l+ +    
     bm02579   441    LESLSLLGFVYKLEGNMNEALEYYERALRLAADF    474  

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