hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-22434519/chunk_1/iprscan-20090617-22434519.nocrc
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Query sequence: bm02579
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00028                                                  95.3      7e-24   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00028    1/6      56    89 ..     1    34 []    10.8       30
SM00028    2/6      99   132 ..     1    34 []    13.2       16
SM00028    3/6     145   178 ..     1    34 []    16.1      4.9
SM00028    4/6     255   288 ..     1    34 []    13.4       15
SM00028    5/6     344   377 ..     1    34 []    10.4       33
SM00028    6/6     441   474 ..     1    34 []    31.4  0.00012

Alignments of top-scoring domains:
SM00028: domain 1 of 6, from 56 to 89: score 10.8, E = 30
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      + +++ l+ + +++g+ +eA++ +++A  l  +    
     bm02579    56    VGIHNLLAYVKHLKGQNEEALKSLKEAENLMQEE    89   

SM00028: domain 2 of 6, from 99 to 132: score 13.2, E = 16
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                        ++ n + +y+++g+++eA  y++k+  +  +    
     bm02579    99    LVTWGNFAWMYYHMGRLAEAQTYLDKVENICKKL    132  

SM00028: domain 3 of 6, from 145 to 178: score 16.1, E = 4.9
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      +++    +++    ++y+ A +++ek+Le+dP+n   
     bm02579   145    IDCEEGWALLKCGGKNYERAKACFEKVLEVDPEN    178  

SM00028: domain 4 of 6, from 255 to 288: score 13.4, E = 15
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                        ++   +  y+++g  d+A+e ++kAL+  P+    
     bm02579   255    TYVFRYAAKFYRRKGSVDKALELLKKALQETPTS    288  

SM00028: domain 5 of 6, from 344 to 377: score 10.4, E = 33
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                        a++ l+ +y   g++ +A+e ++k L + P     
     bm02579   344    EVAHLDLARMYIEAGNHRKAEENFQKLLCMKPVV    377  

SM00028: domain 6 of 6, from 441 to 474: score 31.4, E = 0.00012
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                       e l+ lG +y + g+ +eA+eyye+AL+l+ ++   
     bm02579   441    LESLSLLGFVYKLEGNMNEALEYYERALRLAADF    474  

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