# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm02585.fasta.nr -Q bm02585.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm02585, 361 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6815226 sequences Expectation_n fit: rho(ln(x))= 5.6852+/-0.000197; mu= 8.8484+/- 0.011 mean_var=88.2017+/-17.523, 0's: 43 Z-trim: 104 B-trim: 3086 in 2/63 Lambda= 0.136564 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089154|dbj|BAD93021.1| NF-kappaB inhibitor be ( 361) 2453 492.8 4.1e-137 gi|119577247|gb|EAW56843.1| nuclear factor of kapp ( 338) 2303 463.2 3e-128 gi|114677047|ref|XP_001168520.1| PREDICTED: simila ( 338) 2298 462.2 6e-128 gi|703118|gb|AAC41742.1| thyroid receptor interact ( 338) 2295 461.6 9.1e-128 gi|109124629|ref|XP_001085706.1| PREDICTED: simila ( 337) 2242 451.2 1.3e-124 gi|57015399|sp|Q15653.2|IKBB_HUMAN NF-kappa-B inhi ( 356) 2203 443.5 2.7e-122 gi|30584727|gb|AAP36616.1| Homo sapiens nuclear fa ( 357) 2203 443.5 2.7e-122 gi|114677045|ref|XP_001168499.1| PREDICTED: nuclea ( 356) 2198 442.5 5.3e-122 gi|109124627|ref|XP_001085582.1| PREDICTED: simila ( 356) 2160 435.0 9.6e-120 gi|149722108|ref|XP_001497621.1| PREDICTED: simila ( 355) 2013 406.1 5e-111 gi|57038152|ref|XP_541633.1| PREDICTED: similar to ( 357) 1977 399.0 6.9e-109 gi|113911971|gb|AAI22727.1| Nuclear factor of kapp ( 355) 1942 392.1 8.1e-107 gi|12845499|dbj|BAB26774.1| unnamed protein produc ( 359) 1851 374.2 2e-101 gi|18314668|gb|AAH21938.1| Nfkbib protein [Mus mus ( 359) 1851 374.2 2e-101 gi|14548082|sp|Q60778.1|IKBB_MOUSE NF-kappa-B inhi ( 359) 1844 372.8 5.3e-101 gi|30313667|gb|AAO46890.1| IkBb1 [Mus musculus] ( 359) 1843 372.6 6.1e-101 gi|117616426|gb|ABK42231.1| IkappaB-beta [syntheti ( 359) 1843 372.6 6.1e-101 gi|55250400|gb|AAH85729.1| Nuclear factor of kappa ( 359) 1812 366.5 4.2e-99 gi|14548070|sp|Q9JIA3.1|IKBB_RAT NF-kappa-B inhibi ( 359) 1807 365.5 8.3e-99 gi|119577243|gb|EAW56839.1| nuclear factor of kapp ( 306) 1743 352.8 4.6e-95 gi|114677051|ref|XP_001168469.1| PREDICTED: nuclea ( 306) 1738 351.9 9.1e-95 gi|16553829|dbj|BAB71599.1| unnamed protein produc ( 306) 1727 349.7 4.1e-94 gi|114677053|ref|XP_001168397.1| PREDICTED: simila ( 252) 1693 342.9 3.7e-92 gi|109124631|ref|XP_001085460.1| PREDICTED: simila ( 305) 1682 340.8 1.9e-91 gi|119577246|gb|EAW56842.1| nuclear factor of kapp ( 280) 1651 334.7 1.2e-89 gi|109124633|ref|XP_001085350.1| PREDICTED: simila ( 251) 1637 331.9 7.6e-89 gi|13938162|gb|AAH07197.1|AAH07197 Unknown (protei ( 239) 1611 326.8 2.6e-87 gi|31615948|pdb|1OY3|D Chain D, Crystal Structure ( 282) 1486 302.2 7.5e-80 gi|24987433|pdb|1K3Z|D Chain D, X-Ray Crystal Stru ( 282) 1464 297.8 1.5e-78 gi|30313669|gb|AAO46891.1| IkBb2 [Mus musculus] ( 265) 1449 294.9 1.1e-77 gi|119577245|gb|EAW56841.1| nuclear factor of kapp ( 264) 927 192.0 1e-46 gi|126329183|ref|XP_001368063.1| PREDICTED: hypoth ( 104) 416 91.0 1e-16 gi|109071331|ref|XP_001099548.1| PREDICTED: simila ( 361) 377 83.8 5.4e-14 gi|20530139|gb|AAM27002.1|AF261937_1 NFKBIE protei ( 361) 372 82.8 1.1e-13 gi|39645051|gb|AAH11676.2| NFKBIE protein [Homo sa ( 423) 372 82.8 1.2e-13 gi|114607603|ref|XP_518507.2| PREDICTED: nuclear f ( 500) 372 82.9 1.4e-13 gi|56204424|emb|CAI20103.1| nuclear factor of kapp ( 500) 372 82.9 1.4e-13 gi|194039395|ref|XP_001929619.1| PREDICTED: simila ( 362) 367 81.8 2.1e-13 gi|194191635|gb|EDX05211.1| cact [Drosophila simul ( 479) 347 77.9 4.1e-12 gi|194133008|gb|EDW54576.1| GM17910 [Drosophila se ( 515) 347 78.0 4.3e-12 gi|133779815|gb|ABO38854.1| inhibitor kappa B alph ( 319) 327 73.9 4.6e-11 gi|156079906|gb|ABU48531.1| I-kappa-B [Nematostell ( 383) 317 72.0 2.1e-10 gi|47209080|emb|CAF91537.1| unnamed protein produc ( 287) 312 70.9 3.3e-10 gi|190339868|gb|AAI63433.1| Sb:cb606 [Danio rerio] ( 394) 303 69.2 1.4e-09 gi|170285119|gb|AAI61095.1| Unknown (protein for M ( 347) 301 68.8 1.7e-09 gi|73973023|ref|XP_852039.1| PREDICTED: similar to ( 267) 299 68.3 1.8e-09 gi|29476855|gb|AAH50175.1| Nuclear factor of kappa ( 312) 294 67.4 4.1e-09 gi|37725734|gb|AAO26406.1| NF-kappaB inhibitor alp ( 312) 293 67.2 4.6e-09 gi|115621182|ref|XP_001195153.1| PREDICTED: simila ( 773) 283 65.5 3.7e-08 gi|46250242|gb|AAH68382.1| Nuclear factor of kappa ( 305) 276 63.8 4.7e-08 >>gi|62089154|dbj|BAD93021.1| NF-kappaB inhibitor beta v (361 aa) initn: 2453 init1: 2453 opt: 2453 Z-score: 2616.8 bits: 492.8 E(): 4.1e-137 Smith-Waterman score: 2453; 100.000% identity (100.000% similar) in 361 aa overlap (1-361:1-361) 10 20 30 40 50 60 bm0258 LQNSRQSPATGGRLRGAPEAAGAMAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LQNSRQSPATGGRLRGAPEAAGAMAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG 10 20 30 40 50 60 70 80 90 100 110 120 bm0258 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA 70 80 90 100 110 120 130 140 150 160 170 180 bm0258 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA 130 140 150 160 170 180 190 200 210 220 230 240 bm0258 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH 190 200 210 220 230 240 250 260 270 280 290 300 bm0258 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP 250 260 270 280 290 300 310 320 330 340 350 360 bm0258 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS 310 320 330 340 350 360 bm0258 G : gi|620 G >>gi|119577247|gb|EAW56843.1| nuclear factor of kappa li (338 aa) initn: 2303 init1: 2303 opt: 2303 Z-score: 2457.5 bits: 463.2 E(): 3e-128 Smith-Waterman score: 2303; 100.000% identity (100.000% similar) in 338 aa overlap (24-361:1-338) 10 20 30 40 50 60 bm0258 LQNSRQSPATGGRLRGAPEAAGAMAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG ::::::::::::::::::::::::::::::::::::: gi|119 MAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG 10 20 30 70 80 90 100 110 120 bm0258 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA 40 50 60 70 80 90 130 140 150 160 170 180 bm0258 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA 100 110 120 130 140 150 190 200 210 220 230 240 bm0258 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH 160 170 180 190 200 210 250 260 270 280 290 300 bm0258 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP 220 230 240 250 260 270 310 320 330 340 350 360 bm0258 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS 280 290 300 310 320 330 bm0258 G : gi|119 G >>gi|114677047|ref|XP_001168520.1| PREDICTED: similar to (338 aa) initn: 2298 init1: 2298 opt: 2298 Z-score: 2452.2 bits: 462.2 E(): 6e-128 Smith-Waterman score: 2298; 99.704% identity (100.000% similar) in 338 aa overlap (24-361:1-338) 10 20 30 40 50 60 bm0258 LQNSRQSPATGGRLRGAPEAAGAMAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG ::::::::::::::::::::::::::::::::::::: gi|114 MAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG 10 20 30 70 80 90 100 110 120 bm0258 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA 40 50 60 70 80 90 130 140 150 160 170 180 bm0258 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LHLAAILGEASTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA 100 110 120 130 140 150 190 200 210 220 230 240 bm0258 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH 160 170 180 190 200 210 250 260 270 280 290 300 bm0258 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP 220 230 240 250 260 270 310 320 330 340 350 360 bm0258 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS 280 290 300 310 320 330 bm0258 G : gi|114 G >>gi|703118|gb|AAC41742.1| thyroid receptor interactor (338 aa) initn: 2295 init1: 2295 opt: 2295 Z-score: 2449.0 bits: 461.6 E(): 9.1e-128 Smith-Waterman score: 2295; 99.408% identity (100.000% similar) in 338 aa overlap (24-361:1-338) 10 20 30 40 50 60 bm0258 LQNSRQSPATGGRLRGAPEAAGAMAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG ::::::::::::::::::.:::::::::::::::::: gi|703 MAGVACLGKAADADEWCDTGLGSLGPDAAAPGGPGLG 10 20 30 70 80 90 100 110 120 bm0258 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|703 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA 40 50 60 70 80 90 130 140 150 160 170 180 bm0258 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|703 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA 100 110 120 130 140 150 190 200 210 220 230 240 bm0258 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|703 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH 160 170 180 190 200 210 250 260 270 280 290 300 bm0258 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|703 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP 220 230 240 250 260 270 310 320 330 340 350 360 bm0258 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|703 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDGGDEGVSQEERQGSPAGGS 280 290 300 310 320 330 bm0258 G : gi|703 G >>gi|109124629|ref|XP_001085706.1| PREDICTED: similar to (337 aa) initn: 2299 init1: 2188 opt: 2242 Z-score: 2392.6 bits: 451.2 E(): 1.3e-124 Smith-Waterman score: 2242; 97.633% identity (99.112% similar) in 338 aa overlap (24-361:1-337) 10 20 30 40 50 60 bm0258 LQNSRQSPATGGRLRGAPEAAGAMAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG ::::::::::::::::::::::::::::::::::::: gi|109 MAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG 10 20 30 70 80 90 100 110 120 bm0258 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA 40 50 60 70 80 90 130 140 150 160 170 180 bm0258 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LHLAAILGEASTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA 100 110 120 130 140 150 190 200 210 220 230 240 bm0258 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH ::: ::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PDTSLAQGPDHTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH 160 170 180 190 200 210 250 260 270 280 290 300 bm0258 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|109 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPVARMYGGRTP 220 230 240 250 260 270 310 320 330 340 350 360 bm0258 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS ::::::::.:::::::::::::::::::.: ::::::::::::::::::: ::::::::: gi|109 LGSAMLRPSPILARLLRAHGAPEPEGEDDKPGPCSSSSDSDSGDEGVSQE-RQGSPAGGS 280 290 300 310 320 330 bm0258 G : gi|109 G >>gi|57015399|sp|Q15653.2|IKBB_HUMAN NF-kappa-B inhibito (356 aa) initn: 2203 init1: 2203 opt: 2203 Z-score: 2350.7 bits: 443.5 E(): 2.7e-122 Smith-Waterman score: 2203; 100.000% identity (100.000% similar) in 323 aa overlap (24-346:1-323) 10 20 30 40 50 60 bm0258 LQNSRQSPATGGRLRGAPEAAGAMAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG ::::::::::::::::::::::::::::::::::::: gi|570 MAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG 10 20 30 70 80 90 100 110 120 bm0258 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA 40 50 60 70 80 90 130 140 150 160 170 180 bm0258 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA 100 110 120 130 140 150 190 200 210 220 230 240 bm0258 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH 160 170 180 190 200 210 250 260 270 280 290 300 bm0258 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP 220 230 240 250 260 270 310 320 330 340 350 360 bm0258 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS :::::::::::::::::::::::::::::::::::::::::::::: gi|570 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGDEYDDIVVHSSRSQ 280 290 300 310 320 330 bm0258 G gi|570 TRLPPTPASKPLPDDPRPV 340 350 >>gi|30584727|gb|AAP36616.1| Homo sapiens nuclear factor (357 aa) initn: 2203 init1: 2203 opt: 2203 Z-score: 2350.7 bits: 443.5 E(): 2.7e-122 Smith-Waterman score: 2203; 100.000% identity (100.000% similar) in 323 aa overlap (24-346:1-323) 10 20 30 40 50 60 bm0258 LQNSRQSPATGGRLRGAPEAAGAMAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG ::::::::::::::::::::::::::::::::::::: gi|305 MAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG 10 20 30 70 80 90 100 110 120 bm0258 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA 40 50 60 70 80 90 130 140 150 160 170 180 bm0258 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA 100 110 120 130 140 150 190 200 210 220 230 240 bm0258 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH 160 170 180 190 200 210 250 260 270 280 290 300 bm0258 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP 220 230 240 250 260 270 310 320 330 340 350 360 bm0258 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS :::::::::::::::::::::::::::::::::::::::::::::: gi|305 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGDEYDDIVVHSSRSQ 280 290 300 310 320 330 bm0258 G gi|305 TRLPPTPASKPLPDDPRPVL 340 350 >>gi|114677045|ref|XP_001168499.1| PREDICTED: nuclear fa (356 aa) initn: 2198 init1: 2198 opt: 2198 Z-score: 2345.4 bits: 442.5 E(): 5.3e-122 Smith-Waterman score: 2198; 99.690% identity (100.000% similar) in 323 aa overlap (24-346:1-323) 10 20 30 40 50 60 bm0258 LQNSRQSPATGGRLRGAPEAAGAMAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG ::::::::::::::::::::::::::::::::::::: gi|114 MAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG 10 20 30 70 80 90 100 110 120 bm0258 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA 40 50 60 70 80 90 130 140 150 160 170 180 bm0258 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LHLAAILGEASTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA 100 110 120 130 140 150 190 200 210 220 230 240 bm0258 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH 160 170 180 190 200 210 250 260 270 280 290 300 bm0258 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP 220 230 240 250 260 270 310 320 330 340 350 360 bm0258 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS :::::::::::::::::::::::::::::::::::::::::::::: gi|114 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGDEYDDIVVHSSCSQ 280 290 300 310 320 330 bm0258 G gi|114 TRLPPTPASKPLPDDPDPV 340 350 >>gi|109124627|ref|XP_001085582.1| PREDICTED: similar to (356 aa) initn: 2160 init1: 2160 opt: 2160 Z-score: 2304.9 bits: 435.0 E(): 9.6e-120 Smith-Waterman score: 2160; 97.833% identity (99.381% similar) in 323 aa overlap (24-346:1-323) 10 20 30 40 50 60 bm0258 LQNSRQSPATGGRLRGAPEAAGAMAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG ::::::::::::::::::::::::::::::::::::: gi|109 MAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG 10 20 30 70 80 90 100 110 120 bm0258 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA 40 50 60 70 80 90 130 140 150 160 170 180 bm0258 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LHLAAILGEASTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA 100 110 120 130 140 150 190 200 210 220 230 240 bm0258 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH ::: ::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PDTSLAQGPDHTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH 160 170 180 190 200 210 250 260 270 280 290 300 bm0258 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|109 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPVARMYGGRTP 220 230 240 250 260 270 310 320 330 340 350 360 bm0258 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSSDSDSGDEGVSQEERQGSPAGGS ::::::::.:::::::::::::::::::.: ::::::::::::::: gi|109 LGSAMLRPSPILARLLRAHGAPEPEGEDDKPGPCSSSSDSDSGDEGDEYDDIVVHSGRSH 280 290 300 310 320 330 bm0258 G gi|109 TRLPPTPASKPLPDDPGPV 340 350 >>gi|149722108|ref|XP_001497621.1| PREDICTED: similar to (355 aa) initn: 2090 init1: 1970 opt: 2013 Z-score: 2148.4 bits: 406.1 E(): 5e-111 Smith-Waterman score: 2013; 91.667% identity (96.605% similar) in 324 aa overlap (24-346:1-324) 10 20 30 40 50 60 bm0258 LQNSRQSPATGGRLRGAPEAAGAMAGVACLGKAADADEWCDSGLGSLGPDAAAPGGPGLG ::::::::::.:::::::::::::::::::::::::: gi|149 MAGVACLGKASDADEWCDSGLGSLGPDAAAPGGPGLG 10 20 30 70 80 90 100 110 120 bm0258 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGTEYMDLQNDLGQTA :::::::::::::::::::::::::::::::::::::::::::.:::::.:::::::::: gi|149 AELGPGLSWAPLVFGYVTEDGDTALHLAVIHQHEPFLDFLLGFAAGTEYLDLQNDLGQTA 40 50 60 70 80 90 130 140 150 160 170 180 bm0258 LHLAAILGETSTVEKLYAAGAGLCVAERRGHTALHLACRVGAHACARALLQPRPRRPREA ::::::: :.::::::::::::: :::: ::::::::::::::::::.:::::::::: : gi|149 LHLAAILEEASTVEKLYAAGAGLRVAERGGHTALHLACRVGAHACARVLLQPRPRRPRGA 100 110 120 130 140 150 190 200 210 220 230 240 bm0258 PDTYLAQGPDRTPDTNHTPVALYPDSDLEKEEEESEEDWKLQLEAENYEGHTPLHVAVIH :.::::: ::.::.:.::::::::: ::::::.::::::::::::::::::::::::::: gi|149 PSTYLAQDPDHTPNTDHTPVALYPDPDLEKEEDESEEDWKLQLEAENYEGHTPLHVAVIH 160 170 180 190 200 210 250 260 270 280 290 300 bm0258 KDVEMVRLLRDAGADLDKPEPTCGRSPLHLAVEAQAADVLELLLRAGANPAARMYGGRTP ::.:::.:::.:::::.:::::::::::::::::::::::::::::::.:.::::::::: gi|149 KDAEMVQLLREAGADLNKPEPTCGRSPLHLAVEAQAADVLELLLRAGADPTARMYGGRTP 220 230 240 250 260 270 310 320 330 340 350 bm0258 LGSAMLRPNPILARLLRAHGAPEPEGEDEKSGPCSSSS-DSDSGDEGVSQEERQGSPAGG :::: ::::: :::::::::::::: :::: ::::::: :::::::: gi|149 LGSATLRPNPNLARLLRAHGAPEPEDEDEKPGPCSSSSSDSDSGDEGDEYDDIVVHRGRS 280 290 300 310 320 330 360 bm0258 SG gi|149 QNPLPPAPASKPLPDDPV 340 350 361 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 13:04:54 2008 done: Thu Aug 7 13:07:25 2008 Total Scan time: 797.580 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]