hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-13072674/chunk_1/iprscan-20080807-13072674.nocrc
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Query sequence: bm02585
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00248                                                 128.1    9.9e-34   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00248    1/6      80   109 ..     1    30 []    22.2    0.073
SM00248    2/6     116   145 ..     1    30 []    13.1       40
SM00248    3/6     149   179 ..     1    30 []    17.3      2.2
SM00248    4/6     229   258 ..     1    30 []    36.7  3.1e-06
SM00248    5/6     263   292 ..     1    30 []    31.7  9.7e-05
SM00248    6/6     296   326 ..     1    30 []     7.0  5.3e+02

Alignments of top-scoring domains:
SM00248: domain 1 of 6, from 80 to 109: score 22.2, E = 0.073
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG+T+LHlA+ + ++ ++ +Ll  +a  ++   
     bm02585    80    DGDTALHLAVIHQHEPFLDFLLGFSAGTEY    109  

SM00248: domain 2 of 6, from 116 to 145: score 13.1, E = 40
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+LHlAa  g  ++v+ L  +ga + +   
     bm02585   116    LGQTALHLAAILGETSTVEKLYAAGAGLCV    145  

SM00248: domain 3 of 6, from 149 to 179: score 17.3, E = 2.2
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                       G+T+LHlA++ g + ++++Ll+  ++ + +   
     bm02585   149    RGHTALHLACRVGAHACARALLQPRPrRPRE    179  

SM00248: domain 4 of 6, from 229 to 258: score 36.7, E = 3.1e-06
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G+TpLH+A+ ++++e+v+lL d+gad+++   
     bm02585   229    EGHTPLHVAVIHKDVEMVRLLRDAGADLDK    258  

SM00248: domain 5 of 6, from 263 to 292: score 31.7, E = 9.7e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       Gr+pLHlA+e    +v++lLl++ga++ a   
     bm02585   263    CGRSPLHLAVEAQAADVLELLLRAGANPAA    292  

SM00248: domain 6 of 6, from 296 to 326: score 7.0, E = 5.3e+02
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                       GrTpL  A+ + n+ +++lL  +ga++++    
     bm02585   296    GGRTPLGSAMLRPNPILARLLRAHGApEPEG    326  

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