hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-13182680/chunk_1/iprscan-20080807-13182680.nocrc
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Query sequence: bm02588
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00353                                                  71.4    1.1e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00353    1/1     122   174 ..     1    61 []    71.4  1.1e-16

Alignments of top-scoring domains:
SM00353: domain 1 of 1, from 122 to 174: score 71.4, E = 1.1e-16
                   *->narERrlrRRekiNeqafdeLrslvPtlpkgggnskKlsKasiLrlA
                      narER  +R++ +N  a+d Lr++vP+      + +KlsK+++LrlA
     bm02588   122    NARER--NRMHGLNA-ALDNLRKVVPCYS----KTQKLSKIETLRLA 161  

                   ieYIrksLqeqlqe<-*
                    +YI + L e l++   
     bm02588   162 KNYI-WALSEILRS    174  

//