# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm02695.fasta.nr -Q bm02695.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm02695, 339 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6822831 sequences Expectation_n fit: rho(ln(x))= 5.8140+/-0.000191; mu= 8.1756+/- 0.011 mean_var=94.8520+/-18.209, 0's: 46 Z-trim: 49 B-trim: 0 in 0/66 Lambda= 0.131689 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|17375873|sp|O14908|GIPC1_HUMAN PDZ domain-conta ( 333) 2231 433.5 2.4e-119 gi|158261527|dbj|BAF82941.1| unnamed protein produ ( 333) 2220 431.4 1e-118 gi|119604833|gb|EAW84427.1| GIPC PDZ domain contai ( 339) 2209 429.3 4.5e-118 gi|76621326|ref|XP_870683.1| PREDICTED: similar to ( 333) 2192 426.1 4.1e-117 gi|73986648|ref|XP_542018.2| PREDICTED: similar to ( 333) 2171 422.1 6.6e-116 gi|146345426|sp|Q9Z254|GIPC1_RAT PDZ domain-contai ( 333) 2141 416.4 3.4e-114 gi|149037904|gb|EDL92264.1| GIPC PDZ domain contai ( 333) 2137 415.7 5.8e-114 gi|17376409|sp|Q9Z0G0|GIPC1_MOUSE PDZ domain-conta ( 333) 2135 415.3 7.5e-114 gi|3789936|gb|AAC67549.1| RGS-GAIP interacting pro ( 333) 2134 415.1 8.6e-114 gi|109123684|ref|XP_001111400.1| PREDICTED: regula ( 333) 2110 410.5 2e-112 gi|126323152|ref|XP_001366317.1| PREDICTED: simila ( 333) 2096 407.9 1.3e-111 gi|33872740|gb|AAH04226.2| GIPC1 protein [Homo sap ( 300) 2000 389.6 3.7e-106 gi|114675664|ref|XP_001157869.1| PREDICTED: regula ( 314) 1893 369.3 5e-100 gi|50841397|gb|AAT84063.1| regulator of G-protein ( 335) 1814 354.3 1.7e-95 gi|149574111|ref|XP_001519285.1| PREDICTED: simila ( 449) 1786 349.1 8.6e-94 gi|2613004|gb|AAB84249.1| Tax interaction protein ( 256) 1676 328.0 1.1e-87 gi|12004322|gb|AAG44001.1|AF215838_1 developmental ( 331) 1635 320.3 3e-85 gi|56788804|gb|AAH88477.1| GIPC PDZ domain contain ( 332) 1623 318.0 1.4e-84 gi|119604831|gb|EAW84425.1| GIPC PDZ domain contai ( 236) 1553 304.6 1.1e-80 gi|28279698|gb|AAH45953.1| GIPC PDZ domain contain ( 328) 1535 301.3 1.5e-79 gi|169642636|gb|AAI60519.1| Unknown (protein for M ( 331) 1517 297.9 1.7e-78 gi|47215425|emb|CAG01122.1| unnamed protein produc ( 383) 1512 297.0 3.6e-78 gi|57921030|gb|AAH89139.1| GIPC protein [Xenopus l ( 331) 1506 295.8 7.1e-78 gi|18071753|gb|AAL58320.1|AF411605_1 GAIP-interact ( 320) 1445 284.2 2.1e-74 gi|108742107|gb|AAI17656.1| Zgc:136839 [Danio reri ( 333) 1390 273.7 3.1e-71 gi|47216592|emb|CAG00627.1| unnamed protein produc ( 391) 1358 267.7 2.3e-69 gi|126323402|ref|XP_001364164.1| PREDICTED: simila ( 412) 1319 260.3 4.1e-67 gi|50751412|ref|XP_422385.1| PREDICTED: similar to ( 318) 1311 258.7 9.7e-67 gi|76622328|ref|XP_875689.1| PREDICTED: similar to ( 318) 1293 255.3 1e-65 gi|194211178|ref|XP_001496632.2| PREDICTED: simila ( 359) 1291 254.9 1.5e-65 gi|110808256|sp|Q498D9|GIPC2_RAT PDZ domain-contai ( 314) 1290 254.7 1.5e-65 gi|74716119|sp|Q8TF64|GIPC3_HUMAN PDZ domain-conta ( 312) 1288 254.3 2e-65 gi|73987457|ref|XP_542175.2| PREDICTED: similar to ( 316) 1284 253.6 3.4e-65 gi|110808255|sp|Q1JQD4|GIPC2_BOVIN PDZ domain-cont ( 313) 1283 253.4 3.8e-65 gi|138519896|gb|AAI35288.1| LOC100125129 protein [ ( 318) 1280 252.8 5.8e-65 gi|109122896|ref|XP_001100669.1| PREDICTED: simila ( 312) 1276 252.1 9.6e-65 gi|81907790|sp|Q9Z2H7|GIPC2_MOUSE PDZ domain-conta ( 314) 1264 249.8 4.7e-64 gi|23271288|gb|AAH36075.1| GIPC PDZ domain contain ( 315) 1264 249.8 4.7e-64 gi|74716120|sp|Q8TF65|GIPC2_HUMAN PDZ domain-conta ( 315) 1263 249.6 5.4e-64 gi|109008572|ref|XP_001104248.1| PREDICTED: simila ( 315) 1254 247.9 1.8e-63 gi|81901760|sp|Q8R5M0|GIPC3_MOUSE PDZ domain-conta ( 297) 1249 246.9 3.2e-63 gi|149034425|gb|EDL89162.1| similar to PDZ-domain ( 297) 1248 246.7 3.7e-63 gi|47206630|emb|CAF95111.1| unnamed protein produc ( 279) 1204 238.3 1.2e-60 gi|12842412|dbj|BAB25591.1| unnamed protein produc ( 257) 1145 227.1 2.6e-57 gi|126343030|ref|XP_001380947.1| PREDICTED: simila ( 301) 1145 227.2 2.9e-57 gi|156224318|gb|EDO45145.1| predicted protein [Nem ( 296) 1121 222.6 6.8e-56 gi|114674635|ref|XP_001135295.1| PREDICTED: simila ( 305) 1094 217.5 2.4e-54 gi|72012430|ref|XP_783797.1| PREDICTED: similar to ( 369) 1095 217.7 2.5e-54 gi|114557288|ref|XP_524746.2| PREDICTED: similar t ( 241) 1072 213.2 3.7e-53 gi|57088795|ref|XP_547321.1| PREDICTED: similar to ( 235) 1059 210.7 2e-52 >>gi|17375873|sp|O14908|GIPC1_HUMAN PDZ domain-containin (333 aa) initn: 2231 init1: 2231 opt: 2231 Z-score: 2297.7 bits: 433.5 E(): 2.4e-119 Smith-Waterman score: 2231; 100.000% identity (100.000% similar) in 333 aa overlap (7-339:1-333) 10 20 30 40 50 60 bm0269 PHFSLLMPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL 10 20 30 40 50 70 80 90 100 110 120 bm0269 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG 60 70 80 90 100 110 130 140 150 160 170 180 bm0269 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV 120 130 140 150 160 170 190 200 210 220 230 240 bm0269 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP 180 190 200 210 220 230 250 260 270 280 290 300 bm0269 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK 240 250 260 270 280 290 310 320 330 bm0269 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY ::::::::::::::::::::::::::::::::::::::: gi|173 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY 300 310 320 330 >>gi|158261527|dbj|BAF82941.1| unnamed protein product [ (333 aa) initn: 2220 init1: 2220 opt: 2220 Z-score: 2286.4 bits: 431.4 E(): 1e-118 Smith-Waterman score: 2220; 99.700% identity (99.700% similar) in 333 aa overlap (7-339:1-333) 10 20 30 40 50 60 bm0269 PHFSLLMPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL 10 20 30 40 50 70 80 90 100 110 120 bm0269 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG 60 70 80 90 100 110 130 140 150 160 170 180 bm0269 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV 120 130 140 150 160 170 190 200 210 220 230 240 bm0269 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP 180 190 200 210 220 230 250 260 270 280 290 300 bm0269 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK 240 250 260 270 280 290 310 320 330 bm0269 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY ::::::::::::::::::: ::::::::::::::::::: gi|158 RNPDELAEALDERLGDFAFSDEFVFDVWGAIGDAKVGRY 300 310 320 330 >>gi|119604833|gb|EAW84427.1| GIPC PDZ domain containing (339 aa) initn: 1584 init1: 1584 opt: 2209 Z-score: 2275.0 bits: 429.3 E(): 4.5e-118 Smith-Waterman score: 2209; 98.230% identity (98.230% similar) in 339 aa overlap (7-339:1-339) 10 20 30 40 50 60 bm0269 PHFSLLMPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL 10 20 30 40 50 70 80 90 100 110 bm0269 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAE------VMFCTLNTHKVD :::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|119 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAERLPPLQVMFCTLNTHKVD 60 70 80 90 100 110 120 130 140 150 160 170 bm0269 MDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MDKLLGGQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDH 120 130 140 150 160 170 180 190 200 210 220 230 bm0269 IHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IHLISVGDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGG 180 190 200 210 220 230 240 250 260 270 280 290 bm0269 RPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RPGSGPQLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMV 240 250 260 270 280 290 300 310 320 330 bm0269 ELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY ::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELGKDKRNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY 300 310 320 330 >>gi|76621326|ref|XP_870683.1| PREDICTED: similar to sem (333 aa) initn: 2192 init1: 2192 opt: 2192 Z-score: 2257.6 bits: 426.1 E(): 4.1e-117 Smith-Waterman score: 2192; 98.198% identity (99.700% similar) in 333 aa overlap (7-339:1-333) 10 20 30 40 50 60 bm0269 PHFSLLMPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL :::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|766 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGAGGPQMGLPPPPPAL 10 20 30 40 50 70 80 90 100 110 120 bm0269 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|766 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAEVMFCTLNTHKVDMDKLLG 60 70 80 90 100 110 130 140 150 160 170 180 bm0269 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV ::::::::::::::::::::::::::.::::::::::::::::::::::::::::.:::: gi|766 GQIGLEDFIFAHVKGQRKEVEVFKSEEALGLTITDNGAGYAFIKRIKEGSVIDHIQLISV 120 130 140 150 160 170 190 200 210 220 230 240 bm0269 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP :::::::::::::::::::::::::::::::::::::::::::::::: ::.:::::::: gi|766 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISVRSGGGRPGSGP 180 190 200 210 220 230 250 260 270 280 290 300 bm0269 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|766 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK 240 250 260 270 280 290 310 320 330 bm0269 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY ::::::::::::::::::::::::::::::::::::::: gi|766 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY 300 310 320 330 >>gi|73986648|ref|XP_542018.2| PREDICTED: similar to RGS (333 aa) initn: 2238 init1: 2171 opt: 2171 Z-score: 2236.1 bits: 422.1 E(): 6.6e-116 Smith-Waterman score: 2171; 96.697% identity (99.700% similar) in 333 aa overlap (7-339:1-333) 10 20 30 40 50 60 bm0269 PHFSLLMPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL ::::::::::::::::::::::::::::::::::.::::.:::.:::::::::: gi|739 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPMGGGGAGGPHMGLPPPPPAL 10 20 30 40 50 70 80 90 100 110 120 bm0269 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|739 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAEVMFCTLNTHKVDMDKLLG 60 70 80 90 100 110 130 140 150 160 170 180 bm0269 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV ::::::::::::::::::::::::::.::::::::::::::::::::::::::::.:::: gi|739 GQIGLEDFIFAHVKGQRKEVEVFKSEEALGLTITDNGAGYAFIKRIKEGSVIDHIQLISV 120 130 140 150 160 170 190 200 210 220 230 240 bm0269 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP :::::::::::::::::::::::::::::::::::::::::::::::. ::.:::::::: gi|739 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMIGVRSGGGRPGSGP 180 190 200 210 220 230 250 260 270 280 290 300 bm0269 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|739 QLGTGRGTLRLRSRGPATVEDVPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK 240 250 260 270 280 290 310 320 330 bm0269 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY ::::::::::::::::::::::::::::::::::::::. gi|739 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRF 300 310 320 330 >>gi|146345426|sp|Q9Z254|GIPC1_RAT PDZ domain-containing (333 aa) initn: 2141 init1: 2141 opt: 2141 Z-score: 2205.3 bits: 416.4 E(): 3.4e-114 Smith-Waterman score: 2141; 96.396% identity (99.099% similar) in 333 aa overlap (7-339:1-333) 10 20 30 40 50 60 bm0269 PHFSLLMPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL ::::::::::::::::::::::.:.::::::::::::.:.: :::::::: .: gi|146 MPLGLGRRKKAPPLVENEEAEPSRSGLGVGEPGPLGGSGAGESQMGLPPPPASL 10 20 30 40 50 70 80 90 100 110 120 bm0269 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|146 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAEVMFCTLNTHKVDMDKLLG 60 70 80 90 100 110 130 140 150 160 170 180 bm0269 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|146 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIQLISV 120 130 140 150 160 170 190 200 210 220 230 240 bm0269 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP :::::::::::::::::::::::::::::::::::::::::::::::::::.::.::::: gi|146 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSSGGHPGSGP 180 190 200 210 220 230 250 260 270 280 290 300 bm0269 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK 240 250 260 270 280 290 310 320 330 bm0269 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY ::::::::::::::::::::::::::::::::::::::: gi|146 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY 300 310 320 330 >>gi|149037904|gb|EDL92264.1| GIPC PDZ domain containing (333 aa) initn: 2137 init1: 2137 opt: 2137 Z-score: 2201.2 bits: 415.7 E(): 5.8e-114 Smith-Waterman score: 2137; 96.096% identity (99.099% similar) in 333 aa overlap (7-339:1-333) 10 20 30 40 50 60 bm0269 PHFSLLMPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL ::::::::::::::::::::::.:.::::::::::::.:.: :::::::: .: gi|149 MPLGLGRRKKAPPLVENEEAEPSRSGLGVGEPGPLGGSGAGESQMGLPPPPASL 10 20 30 40 50 70 80 90 100 110 120 bm0269 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|149 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAEVMFCTLNTHKVDMDKLLG 60 70 80 90 100 110 130 140 150 160 170 180 bm0269 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV :::::::::::::::::::::::::::::::::::::::::::::::::::::::.::.: gi|149 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIQLINV 120 130 140 150 160 170 190 200 210 220 230 240 bm0269 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP :::::::::::::::::::::::::::::::::::::::::::::::::::.::.::::: gi|149 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSSGGHPGSGP 180 190 200 210 220 230 250 260 270 280 290 300 bm0269 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK 240 250 260 270 280 290 310 320 330 bm0269 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY ::::::::::::::::::::::::::::::::::::::: gi|149 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY 300 310 320 330 >>gi|17376409|sp|Q9Z0G0|GIPC1_MOUSE PDZ domain-containin (333 aa) initn: 2135 init1: 2135 opt: 2135 Z-score: 2199.1 bits: 415.3 E(): 7.5e-114 Smith-Waterman score: 2135; 96.396% identity (99.099% similar) in 333 aa overlap (7-339:1-333) 10 20 30 40 50 60 bm0269 PHFSLLMPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL ::::::::::::::::::::::.:.::::::::::::...: :::::::: :: gi|173 MPLGLGRRKKAPPLVENEEAEPSRSGLGVGEPGPLGGSAAGESQMGLPPPPAAL 10 20 30 40 50 70 80 90 100 110 120 bm0269 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|173 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAEVMFCTLNTHKVDMDKLLG 60 70 80 90 100 110 130 140 150 160 170 180 bm0269 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV ::::::::::::::::::::::::::.::::::::::::::::::::::::::::.:::: gi|173 GQIGLEDFIFAHVKGQRKEVEVFKSEEALGLTITDNGAGYAFIKRIKEGSVIDHIQLISV 120 130 140 150 160 170 190 200 210 220 230 240 bm0269 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|173 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGHPGSGP 180 190 200 210 220 230 250 260 270 280 290 300 bm0269 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK 240 250 260 270 280 290 310 320 330 bm0269 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY ::::::::::::::::::::::::::::::::::::::: gi|173 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY 300 310 320 330 >>gi|3789936|gb|AAC67549.1| RGS-GAIP interacting protein (333 aa) initn: 2134 init1: 2134 opt: 2134 Z-score: 2198.1 bits: 415.1 E(): 8.6e-114 Smith-Waterman score: 2134; 95.796% identity (99.099% similar) in 333 aa overlap (7-339:1-333) 10 20 30 40 50 60 bm0269 PHFSLLMPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL ::::::::::::::::::::::.:.::::::::::::.:.: :::::::: .: gi|378 MPLGLGRRKKAPPLVENEEAEPSRSGLGVGEPGPLGGSGAGESQMGLPPPPASL 10 20 30 40 50 70 80 90 100 110 120 bm0269 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|378 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPAAEVMFCTLNTHKVDMDKLLG 60 70 80 90 100 110 130 140 150 160 170 180 bm0269 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|378 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIQLISV 120 130 140 150 160 170 190 200 210 220 230 240 bm0269 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP :::::::::::::::::::::::::::::::::::::::::::::::::::.::.::::: gi|378 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSSGGHPGSGP 180 190 200 210 220 230 250 260 270 280 290 300 bm0269 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK ::::::::::::::::::.::::::::::::::::.:::::::::::::::::::::::: gi|378 QLGTGRGTLRLRSRGPATIEDLPSAFEEKAIEKVDELLESYMGIRDTELAATMVELGKDK 240 250 260 270 280 290 310 320 330 bm0269 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY ::::::::::::::::::::::::::::::::::::::: gi|378 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY 300 310 320 330 >>gi|109123684|ref|XP_001111400.1| PREDICTED: regulator (333 aa) initn: 2110 init1: 2110 opt: 2110 Z-score: 2173.4 bits: 410.5 E(): 2e-112 Smith-Waterman score: 2110; 95.796% identity (96.697% similar) in 333 aa overlap (7-339:1-333) 10 20 30 40 50 60 bm0269 PHFSLLMPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGSGGPQMGLPPPPPAL :::::::::::::::::::::::::::::::::::::::.:: . . : gi|109 MPLGLGRRKKAPPLVENEEAEPGRGGLGVGEPGPLGGGGAGGKYLLIEPXXXXX 10 20 30 40 50 70 80 90 100 110 120 bm0269 RPRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 XXRLVFHTQLAHGSPTGRIEGFTNVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLG 60 70 80 90 100 110 130 140 150 160 170 180 bm0269 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GQIGLEDFIFAHVKGQRKEVEVFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISV 120 130 140 150 160 170 190 200 210 220 230 240 bm0269 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GDMIEAINGQSLLGCRHYEVARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGP 180 190 200 210 220 230 250 260 270 280 290 300 bm0269 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QLGTGRGTLRLRSRGPATVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDK 240 250 260 270 280 290 310 320 330 bm0269 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY ::::::::::::::::::::::::::::::::::::::: gi|109 RNPDELAEALDERLGDFAFPDEFVFDVWGAIGDAKVGRY 300 310 320 330 339 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 13:28:00 2008 done: Thu Aug 7 13:30:39 2008 Total Scan time: 772.250 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]