hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-13304021/chunk_1/iprscan-20080807-13304021.nocrc
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Query sequence: bm02695
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00595.14.fs PDZ domain (Also known as DHR or GLGF)          32.2    2.2e-08   1
PF00595.14.ls PDZ domain (Also known as DHR or GLGF)          34.2    4.3e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00595.14.fs   1/1     139   218 ..     1    86 []    32.2  2.2e-08
PF00595.14.ls   1/1     139   218 ..     1    86 []    34.2  4.3e-07

Alignments of top-scoring domains:
PF00595.14.fs: domain 1 of 1, from 139 to 218: score 32.2, E = 2.2e-08
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      ev ++k  +   lG++i  ++++     +f++++ +Gs  ++    +
     bm02695   139    EVEVFK--SEDALGLTITDNGAG----YAFIKRIKEGSVIDHIH-LI 178  

                   qaGDqIlsvNGqdlenlsheeavlalkgsgg.sevtLtvl<-*
                    +GD+I ++NGq+l + +h e++ +lk+ + +++ tL++    
     bm02695   179 SVGDMIEAINGQSLLGCRHYEVARLLKELPRgRTFTLKLT    218  

PF00595.14.ls: domain 1 of 1, from 139 to 218: score 34.2, E = 4.3e-07
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      ev ++k  +   lG++i  ++++     +f++++ +Gs  ++    +
     bm02695   139    EVEVFK--SEDALGLTITDNGAG----YAFIKRIKEGSVIDHIH-LI 178  

                   qaGDqIlsvNGqdlenlsheeavlalkgsgg.sevtLtvl<-*
                    +GD+I ++NGq+l + +h e++ +lk+ + +++ tL++    
     bm02695   179 SVGDMIEAINGQSLLGCRHYEVARLLKELPRgRTFTLKLT    218  

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