hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-13304021/chunk_1/iprscan-20080807-13304021.nocrc
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Query sequence: bm02695
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00228                                                  55.4    7.1e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00228    1/1     147   221 ..     1    80 []    55.4  7.1e-12

Alignments of top-scoring domains:
SM00228: domain 1 of 1, from 147 to 221: score 55.4, E = 7.1e-12
                   *->gglGfsivg....gifvssvvpGspAakaGrkslglLkvGDvIleVN
                        lG++i++++ + +f++++++Gs+ ++       l+ vGD+I ++N
     bm02695   147    DALGLTITDngagYAFIKRIKEGSVIDHIH-----LISVGDMIEAIN 188  

                   GetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   G +s+ g++h+e+++llk+ ++   G++ tL++  +    
     bm02695   189 G-QSLLGCRHYEVARLLKELPR---GRTFTLKLTEPR    221  

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