hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-13363492/chunk_1/iprscan-20080807-13363492.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: bm02717
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00357                                                  94.3    1.4e-23   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00357    1/1     110   178 ..     1    70 []    94.3  1.4e-23

Alignments of top-scoring domains:
SM00357: domain 1 of 1, from 110 to 178: score 94.3, E = 1.4e-23
                   *->tGtVkwfnatkGFGFIrpddgsggkDvFvhpsaIqg....eglksLr
                       GtVkwfn++ G+GFI + d+  ++DvFvh+ aI++++++++l+s+ 
     bm02717   110    LGTVKWFNVRNGYGFINRNDT--KEDVFVHQTAIKKnnprKYLRSVG 154  

                   eGDkVefdvvsyprggggpqAanvrkl<-*
                   +G++Vefdvv+   g +g +Aanv+ +   
     bm02717   155 DGETVEFDVVE---GEKGAEAANVTGP    178  

//