hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-13481167/chunk_1/iprscan-20080807-13481167.nocrc
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Query sequence: bm02726
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00100                                                 236.9    1.7e-66   2
SM00394                                                  56.8    2.9e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00394    1/1      38    75 ..     1    39 []    56.8  2.9e-12
SM00100    1/2     150   266 ..     1   123 []   114.6  1.1e-29
SM00100    2/2     268   387 ..     1   123 []   122.3  5.5e-32

Alignments of top-scoring domains:
SM00394: domain 1 of 1, from 38 to 75: score 56.8, E = 2.9e-12
                   *->hglqaLLedltveVlraqPsDlvqFaadYFnekLeeqRa<-*
                      hg+q++L+d++v +++++P++++ F++++F ekLe+++    
     bm02726    38    HGIQQVLKDCIVHLCISKPERPMKFLREHF-EKLEKEEN    75   

SM00100: domain 1 of 2, from 150 to 266: score 114.6, E = 1.1e-29
                   *->lfkaldaeelreladalepvrypaGevifrqGdpgdsfYiivsGeve
                      lf++ld+ e+++++da++pv   aGe++++qG  gd+fY++ +Gev+
     bm02726   150    LFAHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVD 196  

                   vyktrlstledgreqilatlgpGdfFGElall...rrarsaaavalvela
                   vy+          + +++ ++ G +FGElal+ +++ra+++ a++ ++l+
     bm02726   197 VYVN---------GEWVTNISEGGSFGELALIygtPRAATVKAKTDLKLW 237  

                   tllridferflqllpenpqlllelllell<-*
                    ++r++++r+l+ +  ++++++e++l+ +   
     bm02726   238 GIDRDSYRRILMGSTLRKRKMYEEFLSKV    266  

SM00100: domain 2 of 2, from 268 to 387: score 122.3, E = 5.5e-32
                   *->lfkaldaeelreladalepvrypaGevifrqGdpgdsfYiivsGeve
                      ++++l++ e++ +adalepv +++Ge i+ qG+pgd+fYii +G++ 
     bm02726   268    ILESLEKWERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTAS 314  

                   vyktrlstledgreqilatlgpGdfFGElall.rrarsaaavalvelatl
                   v+++     ++ + +++++lgp d+FGE+all +r+r+a++va+  + ++
     bm02726   315 VLQR---RSPNEEYVEVGRLGPSDYFGEIALLlNRPRAATVVAR-GPLKC 360  

                   lridferflqllpenpqlllelllell<-*
                   +++d+ rf++ l+ ++++l+++++++    
     bm02726   361 VKLDRPRFERVLGPCSEILKRNIQRYN    387  

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