hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-13541648/chunk_1/iprscan-20080807-13541648.nocrc
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Query sequence: bm02770
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 338.5    4.4e-97   1
SM00219                                                  16.3    3.8e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1      43   331 ..     1   280 []    16.3  3.8e-12
SM00220    1/1      43   331 ..     1   231 []   338.5  4.4e-97

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 43 to 331: score 16.3, E = 3.8e-12
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda....keeFlrE
                       t ++ +GeGa+G V  +    +++ VA+K++ +  +++  +  lrE
     bm02770    43    YTQLQYIGEGAYGMVSSAYDHvrkTRVAIKKISPFEhqtyCQRTLRE 89   

                   akiMkklGgkHpNiVk...LlGvcteegrrFmevePlmivmEymegGdLl
                   ++i+ ++  +H+N++  +++l + t e         ++iv  +me  dL 
     bm02770    90 IQILLRF--RHENVIGirdILRASTLE-----AMRDVYIVQDLMET-DLY 131  

                   dyLrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenk
                   + L++ +  ls+++ ++f +QI +G  Y++s n+ HRDL   N L++   
     bm02770   132 KLLKSQQ--LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTC 179  

                   vvKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWm.APEslk
                     KI+DFGL+R  + +      +d         + + +  rW++APE + 
     bm02770   180 DLKICDFGLARIADPE------HDHTGF----LTEY-VATRWYrAPEIML 218  

                   dgkFtskS.DVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGy
                    +k  +kS D+WS G  L E++++    +          +++ + l   +
     bm02770   219 NSKGYTKSiDIWSVGCILAEMLSNRPIFPGK-----HYLDQLNHILGILG 263  

                   RlpkPendl.p.iS...................svtCPdelYdlMlqCWa
                    + + + ++  ++  ++  ++ +++++    + ++   ++  dl  +   
     bm02770   264 SPSQEDLNCiInMKarnylqslpsktkvawaklFPKSDSKALDLLDRMLT 313  

                   edPedRPtFsel..verl<-*
                   ++P++R t +e   + +l   
     bm02770   314 FNPNKRITVEEAlaHPYL    331  

SM00220: domain 1 of 1, from 43 to 331: score 338.5, E = 4.4e-97
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik........erilrE
                      Y+ l+ +G+Ga+G V  a+d+  + +vAiK+i++ ++++  +r+lrE
     bm02770    43    YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISpfehqtycQRTLRE 89   

                   ikiLkk.dHPNIVkLydvfed......dklylVmEyceGdlGdLfdllkk
                   i+iL + +H+N++ + d+ + ++ +   ++y+V +++e+   dL++llk+
     bm02770    90 IQILLRfRHENVIGIRDILRAstleamRDVYIVQDLMET---DLYKLLKS 136  

                   rgrrglrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..
                   ++       ls ++++++++Qil++L+Y+Hs +++HRDLKP+N+L++++ 
     bm02770   137 QQ-------LSNdHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTtc 179  

                   hvKlaDFGlArql..........ttfvGTpeYmAPEvl....gYgkpavD
                    +K++DFGlAr+ ++++++++  t +v T++Y+APE++ +++gY+k ++D
     bm02770   180 DLKICDFGLARIAdpehdhtgflTEYVATRWYRAPEIMlnskGYTK-SID 228  

                   iWSlGcilyElltGkpPFp......qldlifkkig...............
                   iWS+Gcil+E+l+ +p Fp+++  +ql+ i+ ++g+++ ++ +   + + 
     bm02770   229 IWSVGCILAEMLSNRPIFPgkhyldQLNHILGILGspsqedlnciinmka 278  

                   ......................SpeakdLikklLvkdPekRlta.eaLed
                   +++  + +++++  + +  +++++ a+dL++++L+++P+kR+t++eaL+ 
     bm02770   279 rnylqslpsktkvawaklfpksDSKALDLLDRMLTFNPNKRITVeEALA- 327  

                   eldikaHPff<-*
                         HP++   
     bm02770   328 ------HPYL    331  

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