hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-13593980/chunk_1/iprscan-20080807-13593980.nocrc
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Query sequence: bm02791
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
TIGR01340      aconitase_mito: aconitate hydratase, m  1817.6          0   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
TIGR01340        1/1      49   779 ..     1   761 []  1817.6        0

Alignments of top-scoring domains:
TIGR01340: domain 1 of 1, from 49 to 779: score 1817.6, E = 0
                   *->YekLlenLdkVRrrLnsrPLTLAEKiLYSHLDDpeeSllSqDisGrd
                      Y  L +n  +VR+rLn rPLTL+EKi Y HLDDp+     q i+   
     bm02791    49    YDLLEKNINIVRKRLN-RPLTLSEKIVYGHLDDPAS----QEIE--- 87   

                   vRGksYLKLrPDRVAmQDAsAQMALLQFmtaGLpqvavPasiHCDHLIvg
                    RGksYL+LrPDRVAmQDA+AQMA+LQF+++GL +vavP++iHCDHLI++
     bm02791    88 -RGKSYLRLRPDRVAMQDATAQMAMLQFISSGLSKVAVPSTIHCDHLIEA 136  

                   qkGgekDLaraiatNkEVfDFLeSaakKYGIgFWkPGSGIIHQiVLENYA
                   q+GgekDL ra+++N+EV+ FL++a++KYG+gFWkPGSGIIHQi+LENYA
     bm02791   137 QVGGEKDLRRAKDINQEVYNFLATAGAKYGVGFWKPGSGIIHQIILENYA 186  

                   fPGLlMlGTDSHTPNAGGLgaiaIGVGGADAVDalaGlPWELKAPKilGV
                    PG l +GTDSHTPN+GGLg+i+IGVGGADAVD++aG+PWELK+PK++GV
     bm02791   187 YPGVLLIGTDSHTPNGGGLGGICIGVGGADAVDVMAGIPWELKCPKVIGV 236  

                   kLTGklnGWtsPKDvILKlAGlLTVrGGTGyIvEYfGpGVeSLSCTGmaT
                   kLTG l+GW+sPKDvILK+AG+LTV+GGTG+IvEY+GpGV+S+SCTGmaT
     bm02791   237 KLTGSLSGWSSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMAT 286  

                   ICNMGAEIGATTSlFPFneamkrYLkATnRaeiaeeAknfenftkGvaky
                   ICNMGAEIGATTS+FP+n +mk YL  T+R+ ia  A+          + 
     bm02791   287 ICNMGAEIGATTSVFPYNHRMKKYLSKTGREDIANLAD----------EF 326  

                   kfellkaDkgAeYDeLIEIdLskLEPHvNGPFTPDLstPISkfkekvkkn
                   k  l   D g+ YD+LIEI+Ls+L PH+NGPFTPDL++P+ + ++  +k+
     bm02791   327 KDHLV-PDPGCHYDQLIEINLSELKPHINGPFTPDLAHPVAEVGKVAEKE 375  

                   gWPeklsaGLIGSCTNSSYeDMsRcasIvKdAekaGlKpkipFfVTPGSE
                   gWP ++++GLIGSCTNSSYeDM+R a ++K+A+ +GlK k+ F++TPGSE
     bm02791   376 GWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSE 425  

                   QIRATlERDGilqtFekfGGvVLANACGPCIGQWdRkDvsvkkGepNtIl
                   QIRAT+ERDG  q++   GG+VLANACGPCIGQWdRkD  +kkGe+NtI+
     bm02791   426 QIRATIERDGYAQILRDLGGIVLANACGPCIGQWDRKD--IKKGEKNTIV 473  

                   TSYNRNFrGRNDgNpaTmnFlaSPElVtAmsyAGslkFNPLTDslktpDG
                   TSYNRNF+GRND+Np+T++F++SPE+VtA+++AG+lkFNP TD l++ DG
     bm02791   474 TSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPETDYLTGTDG 523  

                   KeFKlkaPkGDELPekGFeaGRdtfqappdskPdeNVeVaVdPkSdRLqL
                   K+F l+aP  DELP+  F++G+dt+q pp +   +   V V+P+S RLqL
     bm02791   524 KKFRLEAPDADELPKGEFDPGQDTYQHPPKD--SSGQHVDVSPTSQRLQL 571  

                   LePFepWnGkDLkglrVLiKVeGKCTTDhISaAGpWLKYkGHLdNISnNt
                   LePF++W+GkDL++l++LiKV+GKCTTDhISaAGpWLK++GHLdNISnN 
     bm02791   572 LEPFDKWDGKDLEDLQILIKVKGKCTTDHISAAGPWLKFRGHLDNISNNL 621  

                   LiGAvNaetGEvNkaydlfdGskgdiPelardyKarGvkWvVvaehNYGE
                   LiGA N e+G +N + +  + + g +P++ar yK  G+ WvV++++NYGE
     bm02791   622 LIGAINIENGKANSVRNAVTQEFGPVPDTARYYKKHGIRWVVIGDENYGE 671  

                   GSaREHAALePRhLGGriIivKSFARIHETNLKKQGvLPLTFANeaDYDk
                   GS+REHAALePRhLGGr+Ii+KSFARIHETNLKKQG+LPLTFA++aDY k
     bm02791   672 GSSREHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNK 721  

                   IqpgDevelLnLvellkkDnnnGgevdlrvtkkntGkvfeIKlkHTlskd
                   I p D++   +L++  +     G++    ++ +n G  ++I l+HT+++ 
     bm02791   722 IHPVDKLTIQGLKDFTP-----GKPLKCIIKHPN-GTQETILLNHTFNET 765  

                   QigffkAGSALNll<-*
                   Qi++f+AGSALN++   
     bm02791   766 QIEWFRAGSALNRM    779  

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