hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-14055361/chunk_1/iprscan-20080807-14055361.nocrc
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Query sequence: bm02822
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF05577.2.fs  Serine carboxypeptidase S28               214.8    1.9e-61   1
PF05577.2.ls  Serine carboxypeptidase S28                47.5    2.2e-16   1
PF00561.10.fs alpha/beta hydrolase fold                  21.9    6.1e-06   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF05577.2.fs    1/1      37   293 ..     1   272 [.   214.8  1.9e-61
PF05577.2.ls    1/1      37   377 .]     1   467 []    47.5  2.2e-16
PF00561.10.fs   1/1     134   187 ..    29    82 ..    21.9  6.1e-06

Alignments of top-scoring domains:
PF05577.2.fs: domain 1 of 1, from 37 to 293: score 214.8, E = 1.9e-61
                   *->QkLDHFdssn..trtFqQRYfyNdqfyrngdgPiFLmiGGEGpesag
                      Q+LDHF+++  +++tF QR+ ++d f++ g+gPiF+++G+EG   a+
     bm02822    37    QRLDHFNFERfgNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAF 83   

                   wvsngnlhildlAkefGAlVfsLEHRFYGqSkPigdlstenLryLgYLSS
                   + ++g  + + lA+e GAl+++ EHR+YG+S P+g  st+  +   +L++
     bm02822    84 ANNSG--FVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHT-ELLTV 130  

                   eQALaDlasFIkamnNqkfnglsnskWItFGGSYsGsLAAWaRkkyPelV
                   eQALaD+a+   a+   ++ g+++++ I+FGGSY+G+L+A  R kyP+lV
     bm02822   131 EQALADFAELLRALR--RDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLV 178  

                   vGavASSAPllakv...DFkiPEeYneVVetslaqtggGGSLelCadave
                   +Ga A+SAP+la+ + +D++   +++  V ++++  ++    + C + v+
     bm02822   179 AGALAASAPVLAVAglgDSN---QFFRDVTADFEGQSP----K-CTQGVR 220  

                   nGFaeveeLlktkeGrqaLNlskeLqlcpplnetievtdYlDianFFsni
                    +F ++  L++ ++    +  + e+ +c+pl++     d l +++ F++ 
     bm02822   221 EAFRQIKDLFLQGA-YDTV--RWEFGTCQPLSDE---KD-LTQLFMFARN 263  

                   ysnfqgvVQYsyDnqgnstlngytirdlCk<-*
                   + ++ ++  Y+y+++++ +l++ +++  C+   
     bm02822   264 AFTVLAMMDYPYPTDFLGPLPANPVKVGCD    293  

PF05577.2.ls: domain 1 of 1, from 37 to 377: score 47.5, E = 2.2e-16
                   *->QkLDHFdssn..trtFqQRYfyNdqfyrngdgPiFLmiGGEGpesag
                      Q+LDHF+++  +++tF QR+ ++d f++ g+gPiF+++G+EG   a+
     bm02822    37    QRLDHFNFERfgNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAF 83   

                   wvsngnlhildlAkefGAlVfsLEHRFYGqSkPigdlstenLryLgYLSS
                   + ++g  + + lA+e GAl+++ EHR+YG+S P+g  st+  +   +L++
     bm02822    84 ANNSG--FVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHT-ELLTV 130  

                   eQALaDlasFIkamnNqkfnglsnskWItFGGSYsGsLAAWaRkkyPelV
                   eQALaD+a+   a+   ++ g+++++ I+FGGSY+G+L+A  R kyP+lV
     bm02822   131 EQALADFAELLRALR--RDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLV 178  

                   vGavASSAPllakv...DFkiPEeYneVVetslaqtggGGSLelCadave
                   +Ga A+SAP+la+ + +D++   +++  V ++++  ++    + C + v+
     bm02822   179 AGALAASAPVLAVAglgDSN---QFFRDVTADFEGQSP----K-CTQGVR 220  

                   nGFaeveeLlktkeGrqaLNlskeLqlcpplnetievtdYlDianFFsni
                    +F ++  L++ ++    +  + e+ +c+pl++     d l +++ F++ 
     bm02822   221 EAFRQIKDLFLQGA-YDTV--RWEFGTCQPLSDE---KD-LTQLFMFARN 263  

                   ysnfqgvVQYsyDnqgnstlngytirdlCkimlnatttdlilrvevliqv
                   + ++ ++  Y+y+++++ +l++ +++  C+ +l  ++ +     + l+++
     bm02822   264 AFTVLAMMDYPYPTDFLGPLPANPVKVGCDRLL--SEAQR---ITGLRAL 308  

                   nnylnqkitGsgnnsta.disyqlantq.gsyqdssygpedaaddRqWty
                              g++ +a+d + +   +  gs   ++         R    
     bm02822   309 ----------AGALPPApDGQVWRPQAWlGSWGRVG---------R---- 335  

                   QTCtEfGwyqTtdsyaNgnglFgspvPvslfidmCmDvFGasynstkirl
                               +s    +  +g+ +P+           G +++      
     bm02822   336 ------------GS----AARPGALPPAPGLW------WGGQHDL----- 358  

                   rvsaTNyyYGGadnpnatNVvfvNGdlDPWhaLGYtltdstdssvvpyLI
                          + GG             G   PW   G            p   
     bm02822   359 -----PRNPGG-------------GRGRPW---G------------P--- 372  

                   pgaAHCaDMypaspsDspeLkaaRali<-*
                                         +   +   
     bm02822   373 ----------------------SQHWL    377  

PF00561.10.fs: domain 1 of 1, from 134 to 187: score 21.9, E = 6.1e-06
                   *->fddlaedlealldalgldkp.vnlvGhSmGGlialayaakypelrvk
                      ++d+ae l al++ lg +  +++ +G+S+GG++++++  kyp+ +v+
     bm02822   134    LADFAELLRALRRDLGAQDApAIAFGGSYGGMLSAYLRMKYPH-LVA 179  

                   alvlvgtv<-*
                   ++ + +++   
     bm02822   180 GALAASAP    187  

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