hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-14173345/chunk_1/iprscan-20080807-14173345.nocrc
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Query sequence: bm02860
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00324                                                 263.0    2.3e-74   1
SM00109                                                  62.0    7.7e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00109    1/1      43    92 ..     1    61 []    62.0  7.7e-14
SM00324    1/1     116   293 ..     1   193 []   263.0  2.3e-74

Alignments of top-scoring domains:
SM00109: domain 1 of 1, from 43 to 92: score 62.0, E = 7.7e-14
                   *->Hkfvfrtf.kptfCdvCrksiwgsfkqaaksqglrCseCkvkcHkkC
                      H+f+ +tf++p +C++C  ++wg+  q     g++C +C++++Hk+C
     bm02860    43    HNFKVHTFrGPHWCEYCANFMWGLIAQ-----GVKCADCGLNVHKQC 84   

                   aekvpaqshksglsC<-*
                   ++ vp+       +C   
     bm02860    85 SKMVPN-------DC    92   

SM00324: domain 1 of 1, from 116 to 293: score 263.0, E = 2.3e-74
                   *->spiPiivekCieylekrGldteGIYRvsGsksrvkeLreafdsged.
                         P++v++Ci+++e+rGl+ eG+YRvsG +  ++  + afd+++++
     bm02860   116    TKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEk 162  

                   dldsldesiteesedleeydvhdvAglLKlyLReLPePLltfelyeefie
                    ++s            +++d++ ++g+LKly+R+LP PL+t+++y++fie
     bm02860   163 ADIS----------VNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIE 202  

                   aaklyqieatsrkqseksedeeerlralrellslLPpanratLryLl.HL
                    ak+              +d++e+l+ l+e+l+lLPpa+++tLryL+ HL
     bm02860   203 SAKI--------------MDPDEQLETLHEALKLLPPAHCETLRYLMaHL 238  

                   nrVaehsevNkMtarNLAivFgPtLlrpp.......ltdikhqnkvvetl
                   +rV  h+++N+M+a+NL+ivFgPtL+r+p+ +    l di++q  vve l
     bm02860   239 KRVTLHEKENLMNAENLGIVFGPTLMRSPeldamaaLNDIRYQRLVVELL 288  

                   ienad<-*
                   i n+d   
     bm02860   289 IKNED    293  

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