hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-14293889/chunk_1/iprscan-20080807-14293889.nocrc
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Query sequence: bm02881
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00168.20.fs C2 domain                                       25.6    4.7e-07   1
PF00168.20.ls C2 domain                                       12.8      0.016   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00168.20.fs   1/1     444   505 ..     1    73 [.    25.6  4.7e-07
PF00168.20.ls   1/1     444   508 .]     1    88 []    12.8    0.016

Alignments of top-scoring domains:
PF00168.20.fs: domain 1 of 1, from 444 to 505: score 25.6, E = 4.7e-07
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqk.kkTkvikkt
                      Lr+++ieAk+L+pk  k      +++++l++    +   +T  + k 
     bm02881   444    LRLWIIEAKDLAPKK-KY-----FCELCLDD----TLfARTTSKTKA 480  

                   lNPvWNEtFtFevpppdlqetLeieVy<-*
                    N  W E+F+F  ++p+l++ +++ +y   
     bm02881   481 DNIFWGEHFEFF-SLPPLHS-ITVHIY    505  

PF00168.20.ls: domain 1 of 1, from 444 to 508: score 12.8, E = 0.016
                   *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqk.kkTkvikkt
                      Lr+++ieAk+L+pk  k      +++++l++    +   +T  + k 
     bm02881   444    LRLWIIEAKDLAPKK-KY-----FCELCLDD----TLfARTTSKTKA 480  

                   lNPvWNEtFtFevpppdlqetLeieVyDydrfgrddflGevs<-*
                    N  W E+F+F  ++p+l++   i+V+ y  +             
     bm02881   481 DNIFWGEHFEFF-SLPPLHS---ITVHIYKDV----------    508  

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