# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm02930.fasta.nr -Q bm02930.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm02930, 362 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6821323 sequences Expectation_n fit: rho(ln(x))= 6.0562+/-0.000196; mu= 6.1820+/- 0.011 mean_var=106.8074+/-20.567, 0's: 40 Z-trim: 55 B-trim: 553 in 2/64 Lambda= 0.124101 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|3024690|sp|Q15545.1|TAF7_HUMAN Transcription in ( 349) 2260 415.0 1.1e-113 gi|642795|gb|AAB60347.1| TFIID subunit TAFII55 ( 349) 2248 412.8 4.7e-113 gi|57043483|ref|XP_544308.1| PREDICTED: similar to ( 349) 2243 411.9 8.7e-113 gi|122135746|sp|Q2HJG8|TAF7_BOVIN Transcription in ( 349) 2221 408.0 1.3e-111 gi|81864080|sp|Q6R1L1|TAF7_CRIGR Transcription ini ( 341) 2145 394.4 1.6e-107 gi|149017311|gb|EDL76362.1| rCG49239 [Rattus norve ( 341) 2121 390.1 3.2e-106 gi|20978767|sp|Q9R1C0.1|TAF7_MOUSE Transcription i ( 341) 2094 385.2 9.2e-105 gi|194219816|ref|XP_001918058.1| PREDICTED: simila ( 346) 2045 376.5 4e-102 gi|50745656|ref|XP_420187.1| PREDICTED: similar to ( 353) 2002 368.8 8.5e-100 gi|126310482|ref|XP_001369129.1| PREDICTED: simila ( 353) 1998 368.0 1.4e-99 gi|149640055|ref|XP_001513417.1| PREDICTED: simila ( 437) 1934 356.7 4.6e-96 gi|126342912|ref|XP_001364310.1| PREDICTED: simila ( 352) 1876 346.2 5.3e-93 gi|26344495|dbj|BAC35898.1| unnamed protein produc ( 315) 1746 322.9 4.9e-86 gi|49523296|gb|AAH75555.1| TAF7 RNA polymerase II, ( 349) 1664 308.2 1.4e-81 gi|21105466|gb|AAM34676.1|AF506232_1 TATA-binding ( 362) 1650 305.8 8.1e-81 gi|47225335|emb|CAG09835.1| unnamed protein produc ( 362) 1647 305.2 1.2e-80 gi|114602327|ref|XP_001146874.1| PREDICTED: simila ( 286) 1422 264.8 1.3e-68 gi|89266792|emb|CAJ83775.1| TAF7 RNA polymerase II ( 296) 1414 263.4 3.7e-68 gi|76779785|gb|AAI06255.1| MGC78979 protein [Xenop ( 346) 1388 258.8 1e-66 gi|50414545|gb|AAH77208.1| MGC78979 protein [Xenop ( 347) 1388 258.8 1e-66 gi|149755194|ref|XP_001493166.1| PREDICTED: simila ( 347) 1260 235.9 8.3e-60 gi|149638996|ref|XP_001505509.1| PREDICTED: simila ( 353) 1100 207.3 3.5e-51 gi|119623256|gb|EAX02851.1| TAF7-like RNA polymera ( 363) 1066 201.2 2.4e-49 gi|149639000|ref|XP_001505574.1| PREDICTED: simila ( 405) 821 157.4 4.2e-36 gi|115631584|ref|XP_783965.2| PREDICTED: similar t ( 346) 771 148.4 1.9e-33 gi|109131550|ref|XP_001092487.1| PREDICTED: simila ( 463) 757 146.0 1.3e-32 gi|8272564|gb|AAF74259.1| transcription factor IID ( 126) 746 143.5 1.9e-32 gi|76659084|ref|XP_872680.1| PREDICTED: similar to ( 412) 742 143.2 7.8e-32 gi|108877722|gb|EAT41947.1| TFIID subunit TAFII55, ( 358) 738 142.5 1.1e-31 gi|27694372|gb|AAH43391.1| TAF7-like RNA polymeras ( 462) 730 141.1 3.8e-31 gi|74762183|sp|Q5H9L4.1|TAF7L_HUMAN Transcription ( 462) 730 141.1 3.8e-31 gi|13603873|gb|AAK31974.1|AF285595_1 TBP-associate ( 374) 727 140.5 4.7e-31 gi|57210086|emb|CAI42015.1| TAF7-like RNA polymera ( 376) 726 140.3 5.3e-31 gi|119623257|gb|EAX02852.1| TAF7-like RNA polymera ( 377) 726 140.3 5.3e-31 gi|66533242|ref|XP_624942.1| PREDICTED: similar to ( 404) 724 140.0 7.2e-31 gi|157016807|gb|EAA09978.4| AGAP010493-PA [Anophel ( 433) 722 139.7 9.7e-31 gi|91079600|ref|XP_968514.1| PREDICTED: similar to ( 371) 721 139.4 9.7e-31 gi|167868654|gb|EDS32037.1| transcription initiati ( 396) 719 139.1 1.3e-30 gi|74217259|dbj|BAC40723.2| unnamed protein produc ( 118) 711 137.2 1.4e-30 gi|126321198|ref|XP_001376447.1| PREDICTED: simila ( 145) 703 135.9 4.5e-30 gi|74008232|ref|XP_538106.2| PREDICTED: similar to ( 494) 685 133.1 1.1e-28 gi|149066945|gb|EDM16678.1| rCG49036 [Rattus norve ( 380) 682 132.5 1.3e-28 gi|10439752|dbj|BAB15560.1| unnamed protein produc ( 302) 679 131.8 1.5e-28 gi|119623254|gb|EAX02849.1| TAF7-like RNA polymera ( 391) 679 131.9 1.9e-28 gi|149755192|ref|XP_001493193.1| PREDICTED: simila ( 443) 652 127.1 5.8e-27 gi|74225584|dbj|BAE21642.1| unnamed protein produc ( 378) 646 126.0 1.1e-26 gi|17862300|gb|AAL39627.1| LD21722p [Drosophila me ( 447) 637 124.5 3.8e-26 gi|45825077|gb|AAS77446.1| AT27170p [Drosophila me ( 421) 634 123.9 5.2e-26 gi|25091366|sp|Q9VHY5|TAF7_DROME Transcription ini ( 479) 634 123.9 5.8e-26 gi|3213201|gb|AAC39086.1| region with similarity t ( 483) 634 124.0 5.8e-26 >>gi|3024690|sp|Q15545.1|TAF7_HUMAN Transcription initia (349 aa) initn: 2260 init1: 2260 opt: 2260 Z-score: 2196.5 bits: 415.0 E(): 1.1e-113 Smith-Waterman score: 2260; 100.000% identity (100.000% similar) in 349 aa overlap (14-362:1-349) 10 20 30 40 50 60 bm0293 PAFIGEVNHKEIKMSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL ::::::::::::::::::::::::::::::::::::::::::::::: gi|302 MSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL 10 20 30 40 70 80 90 100 110 120 bm0293 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV 50 60 70 80 90 100 130 140 150 160 170 180 bm0293 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK 110 120 130 140 150 160 190 200 210 220 230 240 bm0293 RLLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 RLLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS 170 180 190 200 210 220 250 260 270 280 290 300 bm0293 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN 230 240 250 260 270 280 310 320 330 340 350 360 bm0293 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL 290 300 310 320 330 340 bm0293 EK :: gi|302 EK >>gi|642795|gb|AAB60347.1| TFIID subunit TAFII55 (349 aa) initn: 2248 init1: 2248 opt: 2248 Z-score: 2184.9 bits: 412.8 E(): 4.7e-113 Smith-Waterman score: 2248; 99.427% identity (99.713% similar) in 349 aa overlap (14-362:1-349) 10 20 30 40 50 60 bm0293 PAFIGEVNHKEIKMSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL ::::::::::::::::::::::::::::::::::::::::::::::: gi|642 MSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL 10 20 30 40 70 80 90 100 110 120 bm0293 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|642 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV 50 60 70 80 90 100 130 140 150 160 170 180 bm0293 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|642 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK 110 120 130 140 150 160 190 200 210 220 230 240 bm0293 RLLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|642 RLLSTDAEAVRTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS 170 180 190 200 210 220 250 260 270 280 290 300 bm0293 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|642 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQNQIDN 230 240 250 260 270 280 310 320 330 340 350 360 bm0293 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|642 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL 290 300 310 320 330 340 bm0293 EK :: gi|642 EK >>gi|57043483|ref|XP_544308.1| PREDICTED: similar to TAT (349 aa) initn: 2243 init1: 2243 opt: 2243 Z-score: 2180.1 bits: 411.9 E(): 8.7e-113 Smith-Waterman score: 2243; 98.854% identity (100.000% similar) in 349 aa overlap (14-362:1-349) 10 20 30 40 50 60 bm0293 PAFIGEVNHKEIKMSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL ::::::::::::::::::::::::::::::::::::::::::::::: gi|570 MSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL 10 20 30 40 70 80 90 100 110 120 bm0293 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV 50 60 70 80 90 100 130 140 150 160 170 180 bm0293 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 EEPVATTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK 110 120 130 140 150 160 190 200 210 220 230 240 bm0293 RLLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|570 RLLSTDAEAVSTRWEIIAEDETKETENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS 170 180 190 200 210 220 250 260 270 280 290 300 bm0293 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|570 SSSEDEDETQHQDEEDINIIDTEEDLERQLQEKLNESDEQHQENEGTNQLVMGIQKQIDN 230 240 250 260 270 280 310 320 330 340 350 360 bm0293 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|570 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREREQLSSLQEELESLL 290 300 310 320 330 340 bm0293 EK :: gi|570 EK >>gi|122135746|sp|Q2HJG8|TAF7_BOVIN Transcription initia (349 aa) initn: 2221 init1: 2221 opt: 2221 Z-score: 2158.8 bits: 408.0 E(): 1.3e-111 Smith-Waterman score: 2221; 97.708% identity (99.713% similar) in 349 aa overlap (14-362:1-349) 10 20 30 40 50 60 bm0293 PAFIGEVNHKEIKMSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL :::::::::::::::::::::::::::::::::::::::::::.::: gi|122 MSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLSIEL 10 20 30 40 70 80 90 100 110 120 bm0293 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV :::::::::::::::::.:::::: ::::::::::::::::::.:::::::::::::::: gi|122 HPDGRHGIVRVDRVPLAAKLVDLPRVMESLKTIDKKTFYKTADVCQMLVSTVDGDLYPPV 50 60 70 80 90 100 130 140 150 160 170 180 bm0293 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK :::::..::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|122 EEPVATADPKASKKKDKDKEKKFVWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK 110 120 130 140 150 160 190 200 210 220 230 240 bm0293 RLLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|122 RLLSTDAEAVSTRWEIIAEDETKETENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS 170 180 190 200 210 220 250 260 270 280 290 300 bm0293 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN 230 240 250 260 270 280 310 320 330 340 350 360 bm0293 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL 290 300 310 320 330 340 bm0293 EK :: gi|122 EK >>gi|81864080|sp|Q6R1L1|TAF7_CRIGR Transcription initiat (341 aa) initn: 1511 init1: 1511 opt: 2145 Z-score: 2085.4 bits: 394.4 E(): 1.6e-107 Smith-Waterman score: 2145; 95.415% identity (97.135% similar) in 349 aa overlap (14-362:1-341) 10 20 30 40 50 60 bm0293 PAFIGEVNHKEIKMSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL ::::::::::::::::::::::::::::::::::::::::::::::: gi|818 MSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL 10 20 30 40 70 80 90 100 110 120 bm0293 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|818 HPDGRHGIVRVDRVPLAAKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV 50 60 70 80 90 100 130 140 150 160 170 180 bm0293 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK ::::: .::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|818 EEPVAPADPKASKKKDKDKEKKFVWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK 110 120 130 140 150 160 190 200 210 220 230 240 bm0293 RLLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|818 RLLSTDAEAVSTRWEIIAEDETKETENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS 170 180 190 200 210 220 250 260 270 280 290 300 bm0293 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN :::: ::::.:.::::::::::::::::::::::::::::::::::::::::: gi|818 SSSE--------DEEDVNVIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN 230 240 250 260 270 310 320 330 340 350 360 bm0293 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|818 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEGLESLL 280 290 300 310 320 330 bm0293 EK :: gi|818 EK 340 >>gi|149017311|gb|EDL76362.1| rCG49239 [Rattus norvegicu (341 aa) initn: 1477 init1: 1477 opt: 2121 Z-score: 2062.1 bits: 390.1 E(): 3.2e-106 Smith-Waterman score: 2121; 94.269% identity (97.135% similar) in 349 aa overlap (14-362:1-341) 10 20 30 40 50 60 bm0293 PAFIGEVNHKEIKMSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL :::::::::::::::::::::::::.:::::::::::::::::.::: gi|149 MSKSKDDAPHELESQFILRLPPEYAATVRRAVQSGHVNLKDRLSIEL 10 20 30 40 70 80 90 100 110 120 bm0293 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV :::::::::::::::::.:::::::: ::::::::::::::::: ::::.:::::::::: gi|149 HPDGRHGIVRVDRVPLAAKLVDLPCVTESLKTIDKKTFYKTADISQMLVATVDGDLYPPV 50 60 70 80 90 100 130 140 150 160 170 180 bm0293 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK :::.:..::::.:::::::::::.:::::::::::::::::::::::::::::::::::: gi|149 EEPAATADPKANKKKDKDKEKKFVWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK 110 120 130 140 150 160 190 200 210 220 230 240 bm0293 RLLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RLLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS 170 180 190 200 210 220 250 260 270 280 290 300 bm0293 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN :::: ::::.::::::::::::::::::::::::::::::::::::::::::: gi|149 SSSE--------DEEDVNIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN 230 240 250 260 270 310 320 330 340 350 360 bm0293 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL 280 290 300 310 320 330 bm0293 EK :: gi|149 EK 340 >>gi|20978767|sp|Q9R1C0.1|TAF7_MOUSE Transcription initi (341 aa) initn: 1453 init1: 1453 opt: 2094 Z-score: 2036.0 bits: 385.2 E(): 9.2e-105 Smith-Waterman score: 2094; 92.837% identity (96.848% similar) in 349 aa overlap (14-362:1-341) 10 20 30 40 50 60 bm0293 PAFIGEVNHKEIKMSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL :::.:::::::::::::::::::::.:::::::::::::::.:.::: gi|209 MSKNKDDAPHELESQFILRLPPEYAATVRRAVQSGHVNLKDKLSIEL 10 20 30 40 70 80 90 100 110 120 bm0293 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV :::::::::::::::::.:::::::: ::::::::::::::::: ::::.:::::::::: gi|209 HPDGRHGIVRVDRVPLAAKLVDLPCVTESLKTIDKKTFYKTADISQMLVATVDGDLYPPV 50 60 70 80 90 100 130 140 150 160 170 180 bm0293 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK :: .:..::::.:::::::::::.:::::::::::::::::::::::::::::::::::: gi|209 EEAAATADPKANKKKDKDKEKKFVWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK 110 120 130 140 150 160 190 200 210 220 230 240 bm0293 RLLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|209 RLLSTDAEAVSTRWEIIAEDETKETENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS 170 180 190 200 210 220 250 260 270 280 290 300 bm0293 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN :::: ::::.::.:::::::::::::::::::::::::::::::::::::::: gi|209 SSSE--------DEEDVNILDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN 230 240 250 260 270 310 320 330 340 350 360 bm0293 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL 280 290 300 310 320 330 bm0293 EK :: gi|209 EK 340 >>gi|194219816|ref|XP_001918058.1| PREDICTED: similar to (346 aa) initn: 1673 init1: 1673 opt: 2045 Z-score: 1988.5 bits: 376.5 E(): 4e-102 Smith-Waterman score: 2045; 91.691% identity (96.275% similar) in 349 aa overlap (14-362:1-346) 10 20 30 40 50 60 bm0293 PAFIGEVNHKEIKMSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL ::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL 10 20 30 40 70 80 90 100 110 120 bm0293 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV ::::::::::. .:: . .:: ::::::::::: ::::::::::::::::::: ::: gi|194 HPDGRHGIVRAHCAPLIK---NLPWVMESLKTIDKKLFYKTADICQMLVSTVDGDLCPPV 50 60 70 80 90 100 130 140 150 160 170 180 bm0293 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK :.:::..:::::::.:.:::: :.:..:: ::::::.:: .::::::::::::::::::: gi|194 EKPVAAADPKASKKRDRDKEKIFMWHRGILLPLKNVKKRMLRKTAKKKYIESPDVEKEVK 110 120 130 140 150 160 190 200 210 220 230 240 bm0293 RLLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLS ::::::::::::: ::::::::::.:::::::.::::::::::::::::::::::::::: gi|194 RLLSTDAEAVSTRXEIIAEDETKETENQGLDIASPGMSGHRQGHDSLEHDELREIFNDLS 170 180 190 200 210 220 250 260 270 280 290 300 bm0293 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQKQIDN 230 240 250 260 270 280 310 320 330 340 350 360 bm0293 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEELESLL 290 300 310 320 330 340 bm0293 EK :: gi|194 EK >>gi|50745656|ref|XP_420187.1| PREDICTED: similar to tra (353 aa) initn: 1226 init1: 1196 opt: 2002 Z-score: 1946.8 bits: 368.8 E(): 8.5e-100 Smith-Waterman score: 2002; 85.836% identity (96.034% similar) in 353 aa overlap (14-362:1-353) 10 20 30 40 50 60 bm0293 PAFIGEVNHKEIKMSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL ::::::::::::::::.:::::::::::::::::: ::::::::::: gi|507 MSKSKDDAPHELESQFVLRLPPEYASTVRRAVQSGSVNLKDRLTIEL 10 20 30 40 70 80 90 100 110 120 bm0293 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV : :::::::::::::::.:::::::..:::::::::::::::::::::: :::::::::. gi|507 HADGRHGIVRVDRVPLAAKLVDLPCIIESLKTIDKKTFYKTADICQMLVCTVDGDLYPPL 50 60 70 80 90 100 130 140 150 160 170 180 bm0293 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK :: ..::::::.::::::.::::::::::::::::::::::::::::::::::::::::: gi|507 EEQTVSTDPKANKKKDKDREKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK 110 120 130 140 150 160 190 200 210 220 230 bm0293 RLLSTDAEAVSTRWEIIAEDETKEAENQG----LDISSPGMSGHRQGHDSLEHDELREIF :::::::::::.:::.::::::::..:.: :::::::::::.::: : ::::::::: gi|507 RLLSTDAEAVSVRWEVIAEDETKEVDNHGSLTSLDISSPGMSGHKQGHGSSEHDELREIF 170 180 190 200 210 220 240 250 260 270 280 290 bm0293 NDLSSSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQK ::.::::::::: .:.:.::.::.::::::::::::: :::: :.:::::.::.:::::: gi|507 NDISSSSEDEDERDHHDDEDLNIMDTEEDLERQLQDKPNESDGQQQENEGSNQIVMGIQK 230 240 250 260 270 280 300 310 320 330 340 350 bm0293 QIDNMKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEEL ::::.:.:::::::: ::::::::::::::::.:.::::::.::.:.:::.:..::::.: gi|507 QIDNLKSKLQETQDRRKRQEDLIMKVENLALKTRLQAVLDEFKQQEEREKQQMTSLQEQL 290 300 310 320 330 340 360 bm0293 ESLLEK :::.:: gi|507 ESLMEK 350 >>gi|126310482|ref|XP_001369129.1| PREDICTED: similar to (353 aa) initn: 1210 init1: 1183 opt: 1998 Z-score: 1942.9 bits: 368.0 E(): 1.4e-99 Smith-Waterman score: 1998; 86.686% identity (95.467% similar) in 353 aa overlap (14-362:1-353) 10 20 30 40 50 60 bm0293 PAFIGEVNHKEIKMSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIEL :::.:.:::::::::::::::::::::::::.::: :::::.::::: gi|126 MSKNKEDAPHELESQFILRLPPEYASTVRRAIQSGSVNLKDKLTIEL 10 20 30 40 70 80 90 100 110 120 bm0293 HPDGRHGIVRVDRVPLASKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPV : :::::::::::.:::.:.:::::: ::.::::::::::::::::::: .:::::::: gi|126 HADGRHGIVRVDRAPLAAKVVDLPCVTESMKTIDKKTFYKTADICQMLVCSVDGDLYPPP 50 60 70 80 90 100 130 140 150 160 170 180 bm0293 EEPVASTDPKASKKKDKDKEKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK :::::.::::::::::::.:.::::::::::::::::::::::::::::::::::::::: gi|126 EEPVATTDPKASKKKDKDRERKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVK 110 120 130 140 150 160 190 200 210 220 230 bm0293 RLLSTDAEAVSTRWEIIAEDETKEAENQ----GLDISSPGMSGHRQGHDSLEHDELREIF :::::::::::::::.:::::::::.:: ::::::::::::.::: : ::::::::: gi|126 RLLSTDAEAVSTRWEVIAEDETKEADNQVSLAGLDISSPGMSGHKQGHGSSEHDELREIF 170 180 190 200 210 220 240 250 260 270 280 290 bm0293 NDLSSSSEDEDETQHQDEEDINIIDTEEDLERQLQDKLNESDEQHQENEGTNQLVMGIQK ::.:::::.::: . .:.::::::::::::::::::::.:::::.:::: :::.:::::: gi|126 NDISSSSEEEDERDPHDDEDINIIDTEEDLERQLQDKLDESDEQRQENEQTNQMVMGIQK 230 240 250 260 270 280 300 310 320 330 340 350 bm0293 QIDNMKGKLQETQDRAKRQEDLIMKVENLALKNRFQAVLDELKQKEDREKEQLSSLQEEL ::: ::::::::: :::::::::.::::::::.:.:::::::::.:.:::.:::::.:.: gi|126 QIDIMKGKLQETQGRAKRQEDLIIKVENLALKTRLQAVLDELKQQEEREKQQLSSLEEQL 290 300 310 320 330 340 360 bm0293 ESLLEK :::::: gi|126 ESLLEK 350 362 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 14:33:13 2008 done: Thu Aug 7 14:35:44 2008 Total Scan time: 794.420 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]