hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-14474236/chunk_1/iprscan-20080807-14474236.nocrc
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Query sequence: bm02973
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00400.22.ls WD domain, G-beta repeat                        61.5    2.6e-15   3
PF00400.22.fs WD domain, G-beta repeat                        55.8    9.6e-15   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00400.22.fs   1/3      81   120 ..     1    38 []    16.8  0.00092
PF00400.22.fs   2/3     124   162 ..     1    38 []    32.2  4.3e-08
PF00400.22.ls   2/3     124   162 ..     1    38 []    34.1  4.4e-07

Alignments of top-scoring domains:
PF00400.22.fs: domain 1 of 3, from 81 to 120: score 16.8, E = 0.00092
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                       +   ++  H+++V cv+ +p   +l ++g++D +  +W    
     bm02973    81    DDSEvTFaLHSASVFCVSLDPKTNTLAVTGGEDDKAFVWR    120  

PF00400.22.fs: domain 2 of 3, from 124 to 162: score 32.2, E = 4.3e-08
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                      ge++ +  gH+++Vtc  fs+d ++l+a+g   g +k+W    
     bm02973   124    GELLfECaGHKDSVTCAGFSHD-STLVATGDMSGLLKVWQ    162  

PF00400.22.ls: domain 2 of 3, from 124 to 162: score 34.1, E = 4.4e-07
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                      ge++ +  gH+++Vtc  fs+d ++l+a+g   g +k+W    
     bm02973   124    GELLfECaGHKDSVTCAGFSHD-STLVATGDMSGLLKVWQ    162  

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