hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-15113940/chunk_1/iprscan-20080807-15113940.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: bm03010
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                  87.8    1.3e-21   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/1     395   468 ..     1   121 []    87.8  1.3e-21

Alignments of top-scoring domains:
SM00360: domain 1 of 1, from 395 to 468: score 87.8, E = 1.3e-21
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      ++f g L    +v+++ L ++F              s+f    ++++
     bm03010   395    RIFCGDL--GNEVNDDILARAF--------------SRFPSFLKAKV 425  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   +rdk                      TGk kG++FV F+d++d  +A  +
     bm03010   426 IRDKR---------------------TGKTKGYGFVSFKDPSDYVRA--M 452  

                   ealnaskGkeledgGrptlglrVe<-*
                   +++n   Gk++  g rp   ++++   
     bm03010   453 REMN---GKYV--GSRP---IKLR    468  

//