hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20090617/iprscan-20090617-23102533/chunk_1/iprscan-20090617-23102533.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: bm03021 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00864.9.ls ATP P2X receptor 960.2 7.6e-286 1 PF00864.9.fs ATP P2X receptor 958.2 2.9e-285 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00864.9.fs 1/1 11 361 .. 1 382 [] 958.2 2.9e-285 PF00864.9.ls 1/1 11 361 .. 1 382 [] 960.2 7.6e-286 Alignments of top-scoring domains: PF00864.9.fs: domain 1 of 1, from 11 to 361: score 958.2, E = 2.9e-285 *->FdYkTeKyVlvrskkVGllnRllQLlILvYvvGWVFLieKGYQerDt FdYkTeKyV++++kkVGll+RllQ++IL+Y+v+WVFLi+KGYQ++Dt bm03021 11 FDYKTEKYVIAKNKKVGLLYRLLQASILAYLVVWVFLIKKGYQDVDT 57 slqSSVvTKVKGvAvtnVTqtseLGnRvWDVADYViPaQGeNVFfVvTNl slqS+V+TKVKGvA+tn ts+LG+R+WDVADYViPaQGeNVFfVvTNl bm03021 58 SLQSAVITKVKGVAFTN---TSDLGQRIWDVADYVIPAQGENVFFVVTNL 104 IVTpnQtQGlCpEhpeipdgvCksDsdCtaGeagthgnGvkTGRCVafng IVTpnQ+Q++C+E+++ipdg+C++DsdC+aGea+t+gnGvkTGRC+++++ bm03021 105 IVTPNQRQNVCAENEGIPDGACSKDSDCHAGEAVTAGNGVKTGRCLRREN 154 svrgTCEIfaWCPVEvddsvPspplLkeAENFTlFIKNsIrFPKFNFsKr ++rgTCEIfaWCP+E++ s+P++p+LkeAE+FT+FIKN+IrFPKFNFsK+ bm03021 155 LARGTCEIFAWCPLETS-SRPEEPFLKEAEDFTIFIKNHIRFPKFNFSKS 203 NlLenltatylKsCrFhpknaPyCPIFRLGdvVrkAGqdFqdLAlkGGVv N+++++++++lKsC+F+pkn +yCPIFRLG+v+r+AG+dFqd+Al+GGV+ bm03021 204 NVMDVKDRSFLKSCHFGPKN-HYCPIFRLGSVIRWAGSDFQDIALEGGVI 252 GIkIeWdCDLDkAasqClPhYsFqrLdnvkeeksvSpGYNFRFArYYrde GI+IeW+CDLDkAas+C+PhYsF+rLdn k++ksvS+GYNFRFArYYrd+ bm03021 253 GINIEWNCDLDKAASECHPHYSFSRLDN-KLSKSVSSGYNFRFARYYRDA 301 aGvEyRtLlKaYGIRFDiLVnGkAGKFdIIPTmitiGsGlallGvgTvLC aGvE+RtL+KaYGIRFD++VnGk g+++C bm03021 302 AGVEFRTLMKAYGIRFDVMVNGK----------------------GAFFC 329 DLiLLYllkkrhfYrdkKfeeVedtkagaaselea<-* DL+L+Yl+kkr+fYrdkK+eeV+++++ s++ea bm03021 330 DLVLIYLIKKREFYRDKKYEEVRGLED---SSQEA 361 PF00864.9.ls: domain 1 of 1, from 11 to 361: score 960.2, E = 7.6e-286 *->FdYkTeKyVlvrskkVGllnRllQLlILvYvvGWVFLieKGYQerDt FdYkTeKyV++++kkVGll+RllQ++IL+Y+v+WVFLi+KGYQ++Dt bm03021 11 FDYKTEKYVIAKNKKVGLLYRLLQASILAYLVVWVFLIKKGYQDVDT 57 slqSSVvTKVKGvAvtnVTqtseLGnRvWDVADYViPaQGeNVFfVvTNl slqS+V+TKVKGvA+tn ts+LG+R+WDVADYViPaQGeNVFfVvTNl bm03021 58 SLQSAVITKVKGVAFTN---TSDLGQRIWDVADYVIPAQGENVFFVVTNL 104 IVTpnQtQGlCpEhpeipdgvCksDsdCtaGeagthgnGvkTGRCVafng IVTpnQ+Q++C+E+++ipdg+C++DsdC+aGea+t+gnGvkTGRC+++++ bm03021 105 IVTPNQRQNVCAENEGIPDGACSKDSDCHAGEAVTAGNGVKTGRCLRREN 154 svrgTCEIfaWCPVEvddsvPspplLkeAENFTlFIKNsIrFPKFNFsKr ++rgTCEIfaWCP+E++ s+P++p+LkeAE+FT+FIKN+IrFPKFNFsK+ bm03021 155 LARGTCEIFAWCPLETS-SRPEEPFLKEAEDFTIFIKNHIRFPKFNFSKS 203 NlLenltatylKsCrFhpknaPyCPIFRLGdvVrkAGqdFqdLAlkGGVv N+++++++++lKsC+F+pkn +yCPIFRLG+v+r+AG+dFqd+Al+GGV+ bm03021 204 NVMDVKDRSFLKSCHFGPKN-HYCPIFRLGSVIRWAGSDFQDIALEGGVI 252 GIkIeWdCDLDkAasqClPhYsFqrLdnvkeeksvSpGYNFRFArYYrde GI+IeW+CDLDkAas+C+PhYsF+rLdn k++ksvS+GYNFRFArYYrd+ bm03021 253 GINIEWNCDLDKAASECHPHYSFSRLDN-KLSKSVSSGYNFRFARYYRDA 301 aGvEyRtLlKaYGIRFDiLVnGkAGKFdIIPTmitiGsGlallGvgTvLC aGvE+RtL+KaYGIRFD++VnGk g+++C bm03021 302 AGVEFRTLMKAYGIRFDVMVNGK----------------------GAFFC 329 DLiLLYllkkrhfYrdkKfeeVedtkagaaselea<-* DL+L+Yl+kkr+fYrdkK+eeV+++++ s++ea bm03021 330 DLVLIYLIKKREFYRDKKYEEVRGLED---SSQEA 361 //