hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-15344105/chunk_1/iprscan-20080807-15344105.nocrc
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Query sequence: bm03134
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
PF00118.14.ls TCP-1/cpn60 chaperonin family                591.5   7.3e-175   1
PF00118.14.fs TCP-1/cpn60 chaperonin family                589.4   3.1e-174   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
PF00118.14.fs   1/1      28   524 ..     1   537 []   589.4 3.1e-174
PF00118.14.ls   1/1      28   524 ..     1   537 []   591.5 7.3e-175

Alignments of top-scoring domains:
PF00118.14.fs: domain 1 of 1, from 28 to 524: score 589.4, E = 3.1e-174
                   *->ladivkttLGPkGrnKmlvngsyGditiTnDGaTIlkeielqhPyen
                      l d+++t+LGPkG +Kmlv+g  Gdi++T+DG+  l+e+++qhP   
     bm03134    28    LQDVLRTNLGPKGTMKMLVSGA-GDIKLTKDGNVLLHEMQIQHP--- 70   

                   lgAkllveaskkQddevGDGTTtvvvLAgeLLkeaekLinaGlhPtqIir
                    +A l+++++  Qdd  GDGTT+ v+++geLLk+a  +i  GlhP  I +
     bm03134    71 -TASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITE 119  

                   GyelAaekaleaLkklsipvetndkinkeellkvAktslnsKvisgnsia
                   G+e A ekal+ L+++ ++ e + +   e l+ vA+tsl +Kv+ +  + 
     bm03134   120 GFEAAKEKALQFLEEVKVSREMD-R---ETLIDVARTSLRTKVHAELADV 165  

                   dAlakvgvdavitveeekndk.ysfdldnievvkglGgsifdsglisGyv
                     l++ +vd++++++ ++  +++  dl +ie+++++++s++d+ li+G+v
     bm03134   166 --LTEAVVDSILAIK-KQ--DeP-IDLFMIEIMEMKHKSETDTSLIRGLV 209  

                   itkeerhpvelempkrlendaKIavlncpLeiLelktetkrplviiasde
                   +++++rhp   +m kr+e+ a I+++n++Le  ++kte++ + ++++s+e
     bm03134   210 LDHGARHP---DMKKRVED-ACILTCNVSLE--YEKTEVN-SGFFYKSAE 252  

                   dleaLstlEenklkgkvkviavkkR.vc...dgpnvvitqkegidDiAlh
                   ++e+L+++E+++++ +vk+i+  kR+vc+++d+ +vvi+qk gid  +l+
     bm03134   253 EREKLVKAERKFIEDRVKKIIELKRkVCgdsDKGFVVINQK-GIDPFSLD 301  

                   tladtvisdkagImalrrvskedlgrlakvlgakvvttligpgagsedee
                    l       k+gI alrr+++ +++rl++++g+ ++++++++      ++
     bm03134   302 ALS------KEGIVALRRAKRRNMERLTLACGGVALNSFDDLS-----PD 340  

                   eiGerdevlekeigdstsddkvtkleerkarLsgkvatIllRGateveld
                   ++G+++ v+e  +g+    +k t++e++++   ++++t+l++G+++++l 
     bm03134   341 CLGHAGLVYEYTLGE----EKFTFIEKCNN---PRSVTLLIKGPNKHTLT 383  

                   ElerrieDAlnavkaaiedgriVPGGGaaEielakaLdkykakslegkeq
                   +++++++D+l+avk+ai dg +VPG+Ga+E+++a aL k  + s++g+ q
     bm03134   384 QIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKH-KPSVKGRAQ 432  

                   laveafakALeviPkiLAeNAGldgidviskLraehakGnsdlknyGyda
                   l+v afa+AL++iPk+LA+N+G+d  +++ k+ aeh +       +G+d 
     bm03134   433 LGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESG---QLVGVDL 479  

                   atgkivdmveaGIiDplkVkrqalklAteaAsliLtiDdiImakp<-*
                   +tg+ + ++e G++D++ Vk+q l+++t +A++iL +D+i+ a+    
     bm03134   480 NTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGM    524  

PF00118.14.ls: domain 1 of 1, from 28 to 524: score 591.5, E = 7.3e-175
                   *->ladivkttLGPkGrnKmlvngsyGditiTnDGaTIlkeielqhPyen
                      l d+++t+LGPkG +Kmlv+g  Gdi++T+DG+  l+e+++qhP   
     bm03134    28    LQDVLRTNLGPKGTMKMLVSGA-GDIKLTKDGNVLLHEMQIQHP--- 70   

                   lgAkllveaskkQddevGDGTTtvvvLAgeLLkeaekLinaGlhPtqIir
                    +A l+++++  Qdd  GDGTT+ v+++geLLk+a  +i  GlhP  I +
     bm03134    71 -TASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITE 119  

                   GyelAaekaleaLkklsipvetndkinkeellkvAktslnsKvisgnsia
                   G+e A ekal+ L+++ ++ e + +   e l+ vA+tsl +Kv+ +  + 
     bm03134   120 GFEAAKEKALQFLEEVKVSREMD-R---ETLIDVARTSLRTKVHAELADV 165  

                   dAlakvgvdavitveeekndk.ysfdldnievvkglGgsifdsglisGyv
                     l++ +vd++++++ ++  +++  dl +ie+++++++s++d+ li+G+v
     bm03134   166 --LTEAVVDSILAIK-KQ--DeP-IDLFMIEIMEMKHKSETDTSLIRGLV 209  

                   itkeerhpvelempkrlendaKIavlncpLeiLelktetkrplviiasde
                   +++++rhp   +m kr+e+ a I+++n++Le  ++kte++ + ++++s+e
     bm03134   210 LDHGARHP---DMKKRVED-ACILTCNVSLE--YEKTEVN-SGFFYKSAE 252  

                   dleaLstlEenklkgkvkviavkkR.vc...dgpnvvitqkegidDiAlh
                   ++e+L+++E+++++ +vk+i+  kR+vc+++d+ +vvi+qk gid  +l+
     bm03134   253 EREKLVKAERKFIEDRVKKIIELKRkVCgdsDKGFVVINQK-GIDPFSLD 301  

                   tladtvisdkagImalrrvskedlgrlakvlgakvvttligpgagsedee
                    l       k+gI alrr+++ +++rl++++g+ ++++++++      ++
     bm03134   302 ALS------KEGIVALRRAKRRNMERLTLACGGVALNSFDDLS-----PD 340  

                   eiGerdevlekeigdstsddkvtkleerkarLsgkvatIllRGateveld
                   ++G+++ v+e  +g+    +k t++e++++   ++++t+l++G+++++l 
     bm03134   341 CLGHAGLVYEYTLGE----EKFTFIEKCNN---PRSVTLLIKGPNKHTLT 383  

                   ElerrieDAlnavkaaiedgriVPGGGaaEielakaLdkykakslegkeq
                   +++++++D+l+avk+ai dg +VPG+Ga+E+++a aL k  + s++g+ q
     bm03134   384 QIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKH-KPSVKGRAQ 432  

                   laveafakALeviPkiLAeNAGldgidviskLraehakGnsdlknyGyda
                   l+v afa+AL++iPk+LA+N+G+d  +++ k+ aeh +       +G+d 
     bm03134   433 LGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESG---QLVGVDL 479  

                   atgkivdmveaGIiDplkVkrqalklAteaAsliLtiDdiImakp<-*
                   +tg+ + ++e G++D++ Vk+q l+++t +A++iL +D+i+ a+    
     bm03134   480 NTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGM    524  

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