hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20090617/iprscan-20090617-23225018/chunk_1/iprscan-20090617-23225018.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: bm03163 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR01302 IMP_dehydrog: inosine-5'-monophosphate d 921.2 1.4e-274 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR01302 1/1 41 493 .. 1 476 [] 921.2 1.4e-274 Alignments of top-scoring domains: TIGR01302: domain 1 of 1, from 41 to 493: score 921.2, E = 1.4e-274 *->gLTFDDVLLlPgfidVePddVDlsTritknIkLniPilSspMDTVTE gLT++D+L+lPg+id+ +d VDl++ +tk I+L++P +SspMDTVTE bm03163 41 GLTYNDFLILPGYIDFTADQVDLTSALTKKITLKTPLVSSPMDTVTE 87 srMAIAMAreGGiGVIHrNmsiErQaEeVkrVKraEngiIsREDPvtisP + MAIAMA+ GGiG+IH+N+++E Qa eV++VK++E g+I+ DPv++sP bm03163 88 AGMAIAMALTGGIGFIHHNCTPEFQANEVRKVKKYEQGFIT--DPVVLSP 135 ettvedvlelmerkgisGiPVvedGkdggpktGKLVGIiTkSQWrDvrfv v+dv e ++r+g+ GiP++++G +g+ +LVGIi++ rD++f+ bm03163 136 KDRVRDVFEAKARHGFCGIPITDTGRMGS----RLVGIISS---RDIDFL 178 kdkgkkDAVsevMTpreeliTvpegIdleeAlkvLhkhriekLPvVDkdg k++ e+MT re+l+++p+gI+l eA+++L++++++kLP+V++d+ bm03163 179 KEEEHDCFLEEIMTKREDLVVAPAGITLKEANEILQRSKKGKLPIVNEDD 228 eLVGLiTvkDivkrrefPhAskDtVGenGrLiVGAAvGtRedDleRaeaL eLV+ i ++D+ k+r++P AskD + ++L++GAA+Gt edD+ R++ L bm03163 229 ELVAIIARTDLKKNRDYPLASKD---AKKQLLCGAAIGTHEDDKYRLDLL 275 veAGVDViVIDssHGhSiyvldsiKkiKktYpdldiIaGNVaTaeqAkaL + AGVDV+V+Dss+G+Si+++++iK+iK +Yp l++I+GNV+Ta+qAk+L bm03163 276 AQAGVDVVVLDSSQGNSIFQINMIKYIKDKYPNLQVIGGNVVTAAQAKNL 325 IdAGADglrVGIGPGSICTTRiVaGVGvPQiTAVydVAeyAaqsGipVIA IdAG+D+lrVG+G+GSIC+T++V+++G+PQ+TAVy+V+eyA+ +G+pVIA bm03163 326 IDAGVDALRVGMGSGSICITQEVLACGRPQATAVYKVSEYARRFGVPVIA 375 DGGIrySGDIvKALAaGAdAVMLGSlLAGTtESPGeyyiinGrryKsYRG DGGI+++G+I+KALA+GA++VM+GSlLA+TtE+PGey++ G r+K+YRG bm03163 376 DGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKYRG 425 MGSlgAMenkgkGSsdRYlqeenkNEYTDENedkkfVpEGVeGaVpYKGs MGSl AM k S RY++e dk++V++GV+GaV +KGs bm03163 426 MGSLDAMD-KHLSSQNRYFSEA----------DKIKVAQGVSGAVQDKGS 464 VlellpqLvgGLksGmGyvGarsideLre<-* +++p+L G++++ +++Ga+s+ r+ bm03163 465 IHKFVPYLIAGIQHSCQDIGAKSLTQVRA 493 //