hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-15402998/chunk_1/iprscan-20080807-15402998.nocrc
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Query sequence: bm03184
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00248                                                 211.4      8e-59   9

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00248    1/9      19    48 ..     1    30 []    15.2      9.5
SM00248    2/9      52    81 ..     1    30 []    21.3     0.14
SM00248    3/9      88   117 ..     1    30 []    28.6  0.00084
SM00248    4/9     121   150 ..     1    30 []    33.4  3.1e-05
SM00248    5/9     155   184 ..     1    30 []    22.8    0.048
SM00248    6/9     188   217 ..     1    30 []    29.6  0.00042
SM00248    7/9     221   250 ..     1    30 []    33.3  3.2e-05
SM00248    8/9     256   286 ..     1    30 []     5.9  7.5e+02
SM00248    9/9     289   318 ..     1    30 []    21.3     0.14

Alignments of top-scoring domains:
SM00248: domain 1 of 9, from 19 to 48: score 15.2, E = 9.5
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      d ++   lAa++gn++v++ Ll+kg ++++   
     bm03184    19    DTCSTVGLAAREGNVKVLRKLLKKGRSVDV    48   

SM00248: domain 2 of 9, from 52 to 81: score 21.3, E = 0.14
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+ p+H Aa+++++e++++L++++ + n+   
     bm03184    52    RGWMPIHEAAYHNSVECLQMLINADSSENY    81   

SM00248: domain 3 of 9, from 88 to 117: score 28.6, E = 0.00084
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G+ +LHlAa+ g+ ++v++Ll++gad+na   
     bm03184    88    EGFCALHLAASQGHWKIVQILLEAGADPNA    117  

SM00248: domain 4 of 9, from 121 to 150: score 33.4, E = 3.1e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +  TpL lA+eng+++v++lLl++ga++n    
     bm03184   121    EETTPLFLAVENGQIDVLRLLLQHGANVNG    150  

SM00248: domain 5 of 9, from 155 to 184: score 22.8, E = 0.048
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G++ LH A    n e++klLl+kga+ ++   
     bm03184   155    CGWNSLHQASFQENAEIIKLLLRKGANKEC    184  

SM00248: domain 6 of 9, from 188 to 217: score 29.6, E = 0.00042
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G TpL +Aa++g le + +L+++ga++n+   
     bm03184   188    FGITPLFVAAQYGKLESLSILISSGANVNC    217  

SM00248: domain 7 of 9, from 221 to 250: score 33.3, E = 3.2e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      d  TpL +Aa++g+ ++v+lLl++gad+++   
     bm03184   221    DKATPLFIAAQEGHTKCVELLLSSGADPDL    250  

SM00248: domain 8 of 9, from 256 to 286: score 5.9, E = 7.5e+02
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                        + p+H Aa+ g+ +++ lL+    + ++    
     bm03184   256    SWQLPIHAAAQMGHTKILDLLIPLTNrACDT    286  

SM00248: domain 9 of 9, from 289 to 318: score 21.3, E = 0.14
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +  +p + A+  g+++++++Ll++g +++a   
     bm03184   289    NKVSPVYSAVFGGHEDCLEILLRNGYSPDA    318  

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