hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-11350013/chunk_1/iprscan-20090525-11350013.nocrc
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Query sequence: bm03186
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
PF00106.15.fs short chain dehydrogenase                      82.1      2e-22   1
PF00106.15.ls short chain dehydrogenase                      84.1      4e-22   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
PF00106.15.fs   1/1      51   218 ..     1   181 []    82.1    2e-22
PF00106.15.ls   1/1      51   218 ..     1   181 []    84.1    4e-22

Alignments of top-scoring domains:
PF00106.15.fs: domain 1 of 1, from 51 to 218: score 82.1, E = 2e-22
                   *->GTvLiTGGtGGLGlavARwLvaeHGArhLvLvsRrGpdapgaaeLrr
                        vLiTG+  G+G+++A  +++     +LvL + +     g++e+  
     bm03186    51    EIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDIN---KHGLEET-- 90   

                   iavaeLealGaeVtvaacDVaDrdalaallaaipkaaegPLtgVVHaAGv
                     +a  ++lGa V+   +D + r+++      +  a+ g + ++V++AGv
     bm03186    91 --AAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK-AEIGDVSILVNNAGV 137  

                   ldDgvlesltperldaVlapKvdgAwhLheltrdlmikldrkeLdaFVlf
                   +    l ++ + ++++ + ++v + ++ ++++++ m k      + +V +
     bm03186   138 VYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN---HGHIVTV 184  

                   SSaAGvlGspGQanYAAANAfLDaLAehRraeGL<-*
                   +SaAG +  p   +Y +++++  ++ +++  e++   
     bm03186   185 ASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELA    218  

PF00106.15.ls: domain 1 of 1, from 51 to 218: score 84.1, E = 4e-22
                   *->GTvLiTGGtGGLGlavARwLvaeHGArhLvLvsRrGpdapgaaeLrr
                        vLiTG+  G+G+++A  +++     +LvL + +     g++e+  
     bm03186    51    EIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDIN---KHGLEET-- 90   

                   iavaeLealGaeVtvaacDVaDrdalaallaaipkaaegPLtgVVHaAGv
                     +a  ++lGa V+   +D + r+++      +  a+ g + ++V++AGv
     bm03186    91 --AAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK-AEIGDVSILVNNAGV 137  

                   ldDgvlesltperldaVlapKvdgAwhLheltrdlmikldrkeLdaFVlf
                   +    l ++ + ++++ + ++v + ++ ++++++ m k      + +V +
     bm03186   138 VYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN---HGHIVTV 184  

                   SSaAGvlGspGQanYAAANAfLDaLAehRraeGL<-*
                   +SaAG +  p   +Y +++++  ++ +++  e++   
     bm03186   185 ASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELA    218  

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