hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-15460012/chunk_1/iprscan-20080807-15460012.nocrc
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Query sequence: bm03192
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00612                                                 169.6    3.1e-46   6
SM00225                                                 101.7    8.6e-26   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00225      1/1      60   157 ..     1   114 []   101.7  8.6e-26
SM00612      1/6     309   359 ..     1    55 []     4.8      6.2
SM00612      2/6     360   409 ..     1    55 []    27.7   0.0016
SM00612      3/6     410   456 ..     1    55 []    41.7  9.7e-08
SM00612      4/6     457   503 ..     1    55 []    31.4  0.00013
SM00612      5/6     504   554 ..     1    55 []    31.1  0.00016
SM00612      6/6     555   603 ..     1    55 []    33.0    4e-05

Alignments of top-scoring domains:
SM00225: domain 1 of 1, from 60 to 157: score 101.7, E = 8.6e-26
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                       Dv+lvv+g         ++++a  H+ +Laa+   ++yF+++f ++
     bm03192    60    FDVVLVVEG---------RHIEA--HRILLAAS---CDYFRGMFAGg 92   

                   .......ieldDeallievspeaFralLnflYt.kldlpeedvenveelL
                    ++ ++++ l++      vs+ a+  +L+f+Yt++l+l+ +   nv+e L
     bm03192    93 lkemeqeEVLIH-----GVSYNAMCQILHFIYTsELELSLS---NVQETL 134  

                   elAdfldSYGqip.lvelCeefllknl<-*
                    +A  l    qip++++ C++fl +     
     bm03192   135 VAACQL----QIPeIIHFCCDFLMSWV    157  

SM00612: domain 1 of 6, from 309 to 359: score 4.8, E = 6.2
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvp.sMptpRs
                      ++  +GG + t+     +++ ++ + +++p  ++W+  + s+  + s
     bm03192   309    CVVGFGGIHSTP-----STVLSDQAKYLNPLLGEWKHFTaSLAPRMS 350  

                   gagvaving<-*
                   + g+av+n+   
     bm03192   351 NQGIAVLNN    359  

SM00612: domain 2 of 6, from 360 to 409: score 27.7, E = 0.0016
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                       +Y +GG ++  +      ++ +  ++YDp++n W ++ s+++ ++ 
     bm03192   360    FVYLIGGDNNVQG-----FRAESRCWRYDPRHNRWFQIQSLQQEHAD 401  

                   agvaving<-*
                    +v+v++    
     bm03192   402 LSVCVVGR    409  

SM00612: domain 3 of 6, from 410 to 456: score 41.7, E = 9.7e-08
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                       iY+v G+d +        + l+ vE+YDp tn W  v+++++  + 
     bm03192   410    YIYAVAGRDYH--------NDLNAVERYDPATNSWAYVAPLKREVYA 448  

                   agvaving<-*
                   ++ a+++g   
     bm03192   449 HAGATLEG    456  

SM00612: domain 4 of 6, from 457 to 503: score 31.4, E = 0.00013
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      k Y++ G+ g         ++lk + +YDp +n+W+ +++ p++R+ 
     bm03192   457    KMYITCGRRG--------EDYLKETHCYDPGSNTWHTLADGPVRRAW 495  

                   agvaving<-*
                   +g+a++ +   
     bm03192   496 HGMATLLN    503  

SM00612: domain 5 of 6, from 504 to 554: score 31.1, E = 0.00016
                   *->kiYvvGGfdgttrclp.gegqrlksvEvYDpetnkWrpvpsMptpRs
                      k+Yv+GG ++       g  + +  v +Y++ +++W++v ++p ++ 
     bm03192   504    KLYVIGGSNN-----DaGYRRDVHQVACYSCTSGQWSSVCPLPAGHG 545  

                   gagvaving<-*
                     g+av+++   
     bm03192   546 EPGIAVLDN    554  

SM00612: domain 6 of 6, from 555 to 603: score 33.0, E = 4e-05
                   *->kiYvvGGfdgttrclpgegqrlksvEvYDpetnkWrpvpsMptpRsg
                      +iYv GG++++       g+r+  v +YD e + W+++p + +  sg
     bm03192   555    RIYVLGGRSHNR------GSRTGYVHIYDVEKDCWEEGPQLDNSISG 595  

                   agvaving<-*
                    +++v+     
     bm03192   596 LAACVLTL    603  

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