hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-23290965/chunk_1/iprscan-20090617-23290965.nocrc
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Query sequence: bm03209
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00275                                                 786.4   6.5e-232   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00275    1/1      49   389 ..     1   400 []   786.4 6.5e-232

Alignments of top-scoring domains:
SM00275: domain 1 of 1, from 49 to 389: score 786.4, E = 6.5e-232
                   *->krrnkeIdkqLekekkkkkkaglSgrevKLLLLGaGESGKSTIlKQM
                       +r+k+I+k L+++  +        ++vKLLLLGaGESGKSTI+KQM
     bm03209    49    LERSKAIEKNLKEDGISAA------KDVKLLLLGAGESGKSTIVKQM 89   

                   rIlHgdGFseeErleyrplIysNiiqsmraLleAmeelnipledpesenl
                   +I+H+dGFs e++++y+p++ysN+iqs+ a+++Am++l+i+++d e+   
     bm03209    90 KIIHEDGFSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKER--- 136  

                   neneadadyilsylnikadsseeggseeeplppelaeaikaLWkDpgiqe
                      +ada+++++    + + +e+     ep++ el+ a+ +LW D+giqe
     bm03209   137 ---KADAKMVCD----VVSRMEDT----EPFSAELLSAMMRLWGDSGIQE 175  

                   cyerrneFqLnDStiyiSEaakYFldnidRIsdpdYvPTeqDILrsRvkT
                   c++r++e+qLnDS       akY+ld++dRI+++dY+PTeqDILr+RvkT
     bm03209   176 CFNRSREYQLNDS-------AKYYLDSLDRIGAADYQPTEQDILRTRVKT 218  

                   tGIvEtkFevkklkflgVllqfRmfDVGGQRSERkKWIHCFdnSVtAiiF
                   tGIvEt+F++k+l+f       R+fDVGGQRSERkKWIHCF++ VtAiiF
     bm03209   219 TGIVETHFTFKNLHF-------RLFDVGGQRSERKKWIHCFED-VTAIIF 260  

                   cvaLSEYDQvLeEDettqNRMqESLnLFdsIcNsrwFantTsiILFLNKi
                   cvaLS+YDQvL EDett NRM+ESL+LFdsIcN+++F++ TsiILFLNK+
     bm03209   261 CVALSGYDQVLHEDETT-NRMHESLMLFDSICNNKFFID-TSIILFLNKK 308  

                   DLFeEKikkvpsvplsdyFPdYkGpptppqdqnpdndyeaaakfIkkkFl
                   DLF EKikk+   pl+++FP+Y+Gp          n+ye+aa++I+ +F+
     bm03209   309 DLFGEKIKKS---PLTICFPEYTGP----------NTYEDAAAYIQAQFE 345  

                   rlnrnsnkrdegnskKsiYpHfTCiATDTenIklVFdaVkDtIlqrNLkd
                   ++nr s       ++K+iY+H+TC ATDT+nI++VFdaV+D+I+++NL++
     bm03209   346 SKNR-S-------PNKEIYCHMTC-ATDTNNIQVVFDAVTDIIIANNLRG 386  

                   aGL<-*
                   +GL   
     bm03209   387 CGL    389  

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