hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-16041396/chunk_1/iprscan-20080807-16041396.nocrc
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Query sequence: bm03222
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00156                                                 531.1   4.7e-155   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00156    1/1      69   339 ..     1   321 []   531.1 4.7e-155

Alignments of top-scoring domains:
SM00156: domain 1 of 1, from 69 to 339: score 531.1, E = 4.7e-155
                   *->lseeeilellrevkeilrqepnlvevsetetaPvtvcGDiHGQfdDL
                      lse+ +++l++++keil +e+n+ ev      PvtvcGD+HGQf+DL
     bm03222    69    LSESQVKSLCEKAKEILTKESNVQEVR----CPVTVCGDVHGQFHDL 111  

                   lrlfkKeelnglpppdtnYlFLGDYVDRGpfSiEvilLLfalKilyPnri
                   ++lf   +++g  +pdtnYlF+GDYVDRG++S+E+++LL+alK++y +ri
     bm03222   112 MELF---RIGG-KSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERI 157  

                   fLLRGNHEsrsiNmWvkiYGFydEckrkydgariykiFneaFswLPlaAL
                   ++LRGNHEsr+i+   ++YGFydEc rky++a+++k+F+++F++LPl+AL
     bm03222   158 TILRGNHESRQIT---QVYGFYDECLRKYGNANVWKYFTDLFDYLPLTAL 204  

                   ignkiLCMHGGLSplEsdtldlttLddirkldRpqippqeppddglliDL
                   ++++i+C HGGLSp      ++ tLd ir ldR     qe p++g+++DL
     bm03222   205 VDGQIFCLHGGLSP------SIDTLDHIRALDR----LQEVPHEGPMCDL 244  

                   LWsDPvdlelirddqsvpgwgpskvRGasyvFGpdvvdeFlkknnLklIi
                   LWsDP         ++  gwg+s+ RGa+y+FG+d+ + F ++n+L l+ 
     bm03222   245 LWSDP---------DDRGGWGISP-RGAGYTFGQDISETFNHANGLTLVS 284  

                   RaHqvvdvqmpdGYeffadgdgrvkkLvTiFSAPnYcgqfgNaaAvlkvn
                   RaHq+v+    +GY +++d+      +vTiFSAPnYc+++gN aA++++ 
     bm03222   285 RAHQLVM----EGYNWCHDR-----NVVTIFSAPNYCYRCGNQAAIMEL- 324  

                   dekviqykrdknlklsfvqfkpak<-*
                            d+ lk sf qf+pa+   
     bm03222   325 ---------DDTLKYSFLQFDPAP    339  

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