# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm03306.fasta.nr -Q bm03306.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm03306, 451 aa vs /cdna2/lib/nr/nr library 2779448989 residues in 8089198 sequences statistics sampled from 60000 to 8087206 sequences Expectation_n fit: rho(ln(x))= 5.2119+/-0.000185; mu= 11.4598+/- 0.010 mean_var=74.4639+/-14.502, 0's: 39 Z-trim: 44 B-trim: 471 in 1/66 Lambda= 0.148628 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8089198) gi|21431746|sp|O14874.2|BCKD_HUMAN RecName: Full=[ ( 412) 2751 599.0 7.1e-169 gi|33303769|gb|AAQ02398.1| branched chain alpha-ke ( 413) 2751 599.0 7.1e-169 gi|2583173|gb|AAB82714.1| branched chain alpha-ket ( 412) 2745 597.7 1.7e-168 gi|114662123|ref|XP_001156184.1| PREDICTED: branch ( 412) 2740 596.7 3.6e-168 gi|15451424|dbj|BAB64516.1| hypothetical protein [ ( 412) 2695 587.0 2.9e-165 gi|57087819|ref|XP_536903.1| PREDICTED: similar to ( 510) 2676 583.0 5.8e-164 gi|110278894|sp|Q2KJG8.1|BCKD_BOVIN RecName: Full= ( 412) 2663 580.2 3.4e-163 gi|149725729|ref|XP_001500832.1| PREDICTED: simila ( 412) 2650 577.4 2.3e-162 gi|3183508|sp|Q00972.2|BCKD_RAT RecName: Full=[3-m ( 412) 2622 571.4 1.5e-160 gi|6685240|sp|O55028.1|BCKD_MOUSE RecName: Full=[3 ( 412) 2612 569.2 6.6e-160 gi|26344399|dbj|BAC35850.1| unnamed protein produc ( 412) 2603 567.3 2.5e-159 gi|74178013|dbj|BAE29801.1| unnamed protein produc ( 412) 2603 567.3 2.5e-159 gi|924921|gb|AAB60498.1| branched-chain alpha-keto ( 382) 2514 548.2 1.3e-153 gi|16975321|pdb|1GJV|A Chain A, Branched-Chain Alp ( 388) 2514 548.2 1.3e-153 gi|203153|gb|AAA40818.1| branched-chain alpha-keto ( 412) 2485 542.0 1e-151 gi|119572548|gb|EAW52163.1| branched chain ketoaci ( 365) 2442 532.7 5.7e-149 gi|114662131|ref|XP_001156639.1| PREDICTED: branch ( 365) 2431 530.4 2.9e-148 gi|114662129|ref|XP_001156581.1| PREDICTED: branch ( 482) 2432 530.7 3.1e-148 gi|109128293|ref|XP_001112116.1| PREDICTED: branch ( 365) 2386 520.7 2.3e-145 gi|47507457|gb|AAH70978.1| MGC78818 protein [Xenop ( 413) 2282 498.5 1.3e-138 gi|169146285|emb|CAQ13766.1| branched chain alpha- ( 428) 2108 461.2 2.3e-127 gi|30353802|gb|AAH51774.1| Branched chain alpha-ke ( 419) 2103 460.1 4.8e-127 gi|13278573|gb|AAH04077.1| Bckdk protein [Mus musc ( 309) 2071 453.1 4.4e-125 gi|209154998|gb|ACI33731.1| 3-methyl-2-oxobutanoat ( 427) 2062 451.3 2.2e-124 gi|47214670|emb|CAG00906.1| unnamed protein produc ( 428) 2062 451.3 2.2e-124 gi|149512468|ref|XP_001511214.1| PREDICTED: simila ( 371) 1966 430.7 3.1e-118 gi|14602703|gb|AAH09872.1| BCKDK protein [Homo sap ( 335) 1881 412.4 8.7e-113 gi|119572549|gb|EAW52164.1| branched chain ketoaci ( 382) 1881 412.5 9.6e-113 gi|114662127|ref|XP_001156527.1| PREDICTED: branch ( 403) 1880 412.3 1.2e-112 gi|114662133|ref|XP_001156467.1| PREDICTED: branch ( 335) 1870 410.1 4.4e-112 gi|109128295|ref|XP_001112080.1| PREDICTED: branch ( 335) 1825 400.4 3.6e-109 gi|115911467|ref|XP_780213.2| PREDICTED: similar t ( 418) 1705 374.7 2.4e-101 gi|215495222|gb|EEC04863.1| dehydrogenase kinase, ( 413) 1648 362.5 1.1e-97 gi|210105532|gb|EEA53542.1| hypothetical protein B ( 425) 1464 323.1 8.6e-86 gi|194378200|dbj|BAG57850.1| unnamed protein produ ( 273) 1366 301.9 1.3e-79 gi|252737|gb|AAB22774.1| branched-chain alpha-keto ( 461) 1333 295.0 2.6e-77 gi|156216855|gb|EDO37783.1| predicted protein [Nem ( 376) 1296 287.0 5.5e-75 gi|210110618|gb|EEA58448.1| hypothetical protein B ( 563) 1245 276.2 1.5e-71 gi|221118336|ref|XP_002164867.1| PREDICTED: simila ( 395) 1079 240.5 5.8e-61 gi|115609079|ref|XP_001195805.1| PREDICTED: simila ( 171) 813 183.2 4.5e-44 gi|3641834|emb|CAA07447.1| pyruvate dehydrogenase ( 366) 792 178.9 1.8e-42 gi|158281398|gb|EDP07153.1| mitochondrial pyruvate ( 401) 792 179.0 2e-42 gi|4049632|gb|AAC97601.1| pyruvate dehydrogenase k ( 366) 771 174.4 4.1e-41 gi|75706632|gb|ABA25867.1| mitochondrial pyruvate ( 367) 769 174.0 5.6e-41 gi|45720178|emb|CAG14980.1| pyruvate dehydrogenase ( 367) 751 170.1 8.1e-40 gi|163777720|gb|EDQ91336.1| predicted protein [Mon ( 341) 733 166.3 1.1e-38 gi|117066759|gb|ABK32068.1| mitochondrial pyruvate ( 367) 730 165.6 1.8e-38 gi|220970111|gb|EED88449.1| pyruvate dehydrogenase ( 338) 699 159.0 1.7e-36 gi|157336242|emb|CAO70927.1| unnamed protein produ ( 369) 621 142.3 2e-31 gi|223541635|gb|EEF43184.1| pyruvate dehydrogenase ( 351) 619 141.8 2.6e-31 >>gi|21431746|sp|O14874.2|BCKD_HUMAN RecName: Full=[3-me (412 aa) initn: 2751 init1: 2751 opt: 2751 Z-score: 3188.4 bits: 599.0 E(): 7.1e-169 Smith-Waterman score: 2751; 100.000% identity (100.000% similar) in 412 aa overlap (40-451:1-412) 10 20 30 40 50 60 bm0330 HPLAPFWVAWVLSPSGSSVLAATGSERSKTMILASVLRSGPGGGLPLRPLLGPALALRAR :::::::::::::::::::::::::::::: gi|214 MILASVLRSGPGGGLPLRPLLGPALALRAR 10 20 30 70 80 90 100 110 120 bm0330 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS 40 50 60 70 80 90 130 140 150 160 170 180 bm0330 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ 100 110 120 130 140 150 190 200 210 220 230 240 bm0330 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL 160 170 180 190 200 210 250 260 270 280 290 300 bm0330 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD 220 230 240 250 260 270 310 320 330 340 350 360 bm0330 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD 280 290 300 310 320 330 370 380 390 400 410 420 bm0330 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ 340 350 360 370 380 390 430 440 450 bm0330 GIGTDVYLRLRHIDGREESFRI :::::::::::::::::::::: gi|214 GIGTDVYLRLRHIDGREESFRI 400 410 >>gi|33303769|gb|AAQ02398.1| branched chain alpha-ketoac (413 aa) initn: 2751 init1: 2751 opt: 2751 Z-score: 3188.3 bits: 599.0 E(): 7.1e-169 Smith-Waterman score: 2751; 100.000% identity (100.000% similar) in 412 aa overlap (40-451:1-412) 10 20 30 40 50 60 bm0330 HPLAPFWVAWVLSPSGSSVLAATGSERSKTMILASVLRSGPGGGLPLRPLLGPALALRAR :::::::::::::::::::::::::::::: gi|333 MILASVLRSGPGGGLPLRPLLGPALALRAR 10 20 30 70 80 90 100 110 120 bm0330 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS 40 50 60 70 80 90 130 140 150 160 170 180 bm0330 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ 100 110 120 130 140 150 190 200 210 220 230 240 bm0330 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL 160 170 180 190 200 210 250 260 270 280 290 300 bm0330 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD 220 230 240 250 260 270 310 320 330 340 350 360 bm0330 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD 280 290 300 310 320 330 370 380 390 400 410 420 bm0330 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ 340 350 360 370 380 390 430 440 450 bm0330 GIGTDVYLRLRHIDGREESFRI :::::::::::::::::::::: gi|333 GIGTDVYLRLRHIDGREESFRIL 400 410 >>gi|2583173|gb|AAB82714.1| branched chain alpha-ketoaci (412 aa) initn: 2745 init1: 2745 opt: 2745 Z-score: 3181.4 bits: 597.7 E(): 1.7e-168 Smith-Waterman score: 2745; 99.757% identity (99.757% similar) in 412 aa overlap (40-451:1-412) 10 20 30 40 50 60 bm0330 HPLAPFWVAWVLSPSGSSVLAATGSERSKTMILASVLRSGPGGGLPLRPLLGPALALRAR :::::::::::::::::::::::::::::: gi|258 MILASVLRSGPGGGLPLRPLLGPALALRAR 10 20 30 70 80 90 100 110 120 bm0330 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|258 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS 40 50 60 70 80 90 130 140 150 160 170 180 bm0330 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|258 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ 100 110 120 130 140 150 190 200 210 220 230 240 bm0330 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|258 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL 160 170 180 190 200 210 250 260 270 280 290 300 bm0330 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|258 HEDKPDFFGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD 220 230 240 250 260 270 310 320 330 340 350 360 bm0330 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|258 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD 280 290 300 310 320 330 370 380 390 400 410 420 bm0330 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|258 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ 340 350 360 370 380 390 430 440 450 bm0330 GIGTDVYLRLRHIDGREESFRI :::::::::::::::::::::: gi|258 GIGTDVYLRLRHIDGREESFRI 400 410 >>gi|114662123|ref|XP_001156184.1| PREDICTED: branched c (412 aa) initn: 2740 init1: 2740 opt: 2740 Z-score: 3175.6 bits: 596.7 E(): 3.6e-168 Smith-Waterman score: 2740; 99.757% identity (99.757% similar) in 412 aa overlap (40-451:1-412) 10 20 30 40 50 60 bm0330 HPLAPFWVAWVLSPSGSSVLAATGSERSKTMILASVLRSGPGGGLPLRPLLGPALALRAR ::::::::::: :::::::::::::::::: gi|114 MILASVLRSGPRGGLPLRPLLGPALALRAR 10 20 30 70 80 90 100 110 120 bm0330 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS 40 50 60 70 80 90 130 140 150 160 170 180 bm0330 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ 100 110 120 130 140 150 190 200 210 220 230 240 bm0330 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL 160 170 180 190 200 210 250 260 270 280 290 300 bm0330 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD 220 230 240 250 260 270 310 320 330 340 350 360 bm0330 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD 280 290 300 310 320 330 370 380 390 400 410 420 bm0330 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ 340 350 360 370 380 390 430 440 450 bm0330 GIGTDVYLRLRHIDGREESFRI :::::::::::::::::::::: gi|114 GIGTDVYLRLRHIDGREESFRI 400 410 >>gi|15451424|dbj|BAB64516.1| hypothetical protein [Maca (412 aa) initn: 2695 init1: 2695 opt: 2695 Z-score: 3123.5 bits: 587.0 E(): 2.9e-165 Smith-Waterman score: 2695; 98.058% identity (99.029% similar) in 412 aa overlap (40-451:1-412) 10 20 30 40 50 60 bm0330 HPLAPFWVAWVLSPSGSSVLAATGSERSKTMILASVLRSGPGGGLPLRPLLGPALALRAR ::::::: ::: :: ::::::::.:::::: gi|154 MILASVLGSGPRGGPPLRPLLGPTLALRAR 10 20 30 70 80 90 100 110 120 bm0330 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|154 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYSGRSQDGSHLLKS 40 50 60 70 80 90 130 140 150 160 170 180 bm0330 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::..: gi|154 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADDTQ 100 110 120 130 140 150 190 200 210 220 230 240 bm0330 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|154 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEMLVRYFLDKTLTSRLGIRMLATHHLAL 160 170 180 190 200 210 250 260 270 280 290 300 bm0330 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD 220 230 240 250 260 270 310 320 330 340 350 360 bm0330 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD 280 290 300 310 320 330 370 380 390 400 410 420 bm0330 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|154 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ 340 350 360 370 380 390 430 440 450 bm0330 GIGTDVYLRLRHIDGREESFRI :::::::::::::::::::::: gi|154 GIGTDVYLRLRHIDGREESFRI 400 410 >>gi|57087819|ref|XP_536903.1| PREDICTED: similar to [3- (510 aa) initn: 2660 init1: 2660 opt: 2676 Z-score: 3100.1 bits: 583.0 E(): 5.8e-164 Smith-Waterman score: 2676; 90.949% identity (94.923% similar) in 453 aa overlap (6-451:63-510) 10 20 30 bm0330 SRRRAPTHPHPLAPFWVAWVLSPSG--SSVLAATG ::: .:: : . :: . ::.:::. gi|570 WPRDGSCSLGAELVSILDLPSLLKSEKSPLPTH---IAPCSV--LGSPPSIRSSALAAAQ 40 50 60 70 80 40 50 60 70 80 bm0330 S-----ERSKTMILASVLRSGPGGGLPLRPLLGPALALRARSTSATDTHHVEMARERSKT : :... ::::::: ::: .: ::::::::::.::::::::::::::::::::::: gi|570 SNKETKEQGRKMILASVLGSGPRSGPPLRPLLGPALSLRARSTSATDTHHVEMARERSKT 90 100 110 120 130 140 90 100 110 120 130 140 bm0330 VTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKSARYLQQELPVRIAHRIKGF :::::::::::.::::::::::::::::.::::::::::::::::::::::::::::::: gi|570 VTSFYNQSAIDVAAEKPSVRLTPTMMLYSGRSQDGSHLLKSARYLQQELPVRIAHRIKGF 150 160 170 180 190 200 150 160 170 180 190 200 bm0330 RCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQYCQLVRQLLDDHKDVVTLL : ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|570 RSLPFIIGCNPTILHVHELYIRAFQKLTDFPLIKDQADEAQYCQLVRQLLDDHKDVVTLL 210 220 230 240 250 260 210 220 230 240 250 260 bm0330 AEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKK :::::::::::.::::::.::::::::::::::::::::::::::::::::::::::::: gi|570 AEGLRESRKHIQDEKLVRFFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLSPKK 270 280 290 300 310 320 270 280 290 300 310 320 bm0330 IIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 IIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHL 330 340 350 360 370 380 330 340 350 360 370 380 bm0330 DTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLF :::::::::::::::::.::.::::::::::::::::::::::::::::::::::::::: gi|570 DTPYNVPDVVITIANNDIDLVIRISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLF 390 400 410 420 430 440 390 400 410 420 430 440 bm0330 GHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREES ::::::::.::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|570 GHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLHLQSLQGIGTDVYLRLRHIDGREES 450 460 470 480 490 500 450 bm0330 FRI ::: gi|570 FRI 510 >>gi|110278894|sp|Q2KJG8.1|BCKD_BOVIN RecName: Full=[3-m (412 aa) initn: 2663 init1: 2663 opt: 2663 Z-score: 3086.4 bits: 580.2 E(): 3.4e-163 Smith-Waterman score: 2663; 96.602% identity (99.029% similar) in 412 aa overlap (40-451:1-412) 10 20 30 40 50 60 bm0330 HPLAPFWVAWVLSPSGSSVLAATGSERSKTMILASVLRSGPGGGLPLRPLLGPALALRAR ::::::: ::: :: ::::::::::.:::: gi|110 MILASVLGSGPRGGPPLRPLLGPALSLRAR 10 20 30 70 80 90 100 110 120 bm0330 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS ::::::::::::::::::::::::::::::.::::::::::::::::.:::::::::::: gi|110 STSATDTHHVEMARERSKTVTSFYNQSAIDVAAEKPSVRLTPTMMLYSGRSQDGSHLLKS 40 50 60 70 80 90 130 140 150 160 170 180 bm0330 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::. gi|110 ARYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAR 100 110 120 130 140 150 190 200 210 220 230 240 bm0330 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|110 YCQLVRQLLDDHKDVVTLLAEGLRESRKYIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL 160 170 180 190 200 210 250 260 270 280 290 300 bm0330 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD 220 230 240 250 260 270 310 320 330 340 350 360 bm0330 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD ::::::::::::::::::::::::::::::::::::.::.:::::::::::::::::::: gi|110 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLVIRISDRGGGIAHKDLDRVMD 280 290 300 310 320 330 370 380 390 400 410 420 bm0330 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ :::::::::::::::::::::::.:::.::::::::::::::::::::::::::.::::: gi|110 YHFTTAEASTQDPRISPLFGHLDLHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLRLQSLQ 340 350 360 370 380 390 430 440 450 bm0330 GIGTDVYLRLRHIDGREESFRI :::::::::::::::::::::: gi|110 GIGTDVYLRLRHIDGREESFRI 400 410 >>gi|149725729|ref|XP_001500832.1| PREDICTED: similar to (412 aa) initn: 2650 init1: 2650 opt: 2650 Z-score: 3071.3 bits: 577.4 E(): 2.3e-162 Smith-Waterman score: 2650; 96.117% identity (98.544% similar) in 412 aa overlap (40-451:1-412) 10 20 30 40 50 60 bm0330 HPLAPFWVAWVLSPSGSSVLAATGSERSKTMILASVLRSGPGGGLPLRPLLGPALALRAR ::::::: .:: :: :::::::::: ::: gi|149 MILASVLGNGPRGGPPLRPLLGPALLLRAG 10 20 30 70 80 90 100 110 120 bm0330 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS ::::::::::::::::::::::::::::::.::::::::::::::::.:::::::::::: gi|149 STSATDTHHVEMARERSKTVTSFYNQSAIDVAAEKPSVRLTPTMMLYSGRSQDGSHLLKS 40 50 60 70 80 90 130 140 150 160 170 180 bm0330 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::... gi|149 ARYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADDTR 100 110 120 130 140 150 190 200 210 220 230 240 bm0330 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL 160 170 180 190 200 210 250 260 270 280 290 300 bm0330 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD 220 230 240 250 260 270 310 320 330 340 350 360 bm0330 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD ::::::::::::::::::::::::::::::::::::.::.::::::::::.::::::::: gi|149 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLVIRISDRGGGITHKDLDRVMD 280 290 300 310 320 330 370 380 390 400 410 420 bm0330 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|149 YHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ 340 350 360 370 380 390 430 440 450 bm0330 GIGTDVYLRLRHIDGREESFRI :::::::::::::::::::::: gi|149 GIGTDVYLRLRHIDGREESFRI 400 410 >>gi|3183508|sp|Q00972.2|BCKD_RAT RecName: Full=[3-methy (412 aa) initn: 2622 init1: 2622 opt: 2622 Z-score: 3038.9 bits: 571.4 E(): 1.5e-160 Smith-Waterman score: 2622; 95.631% identity (98.301% similar) in 412 aa overlap (40-451:1-412) 10 20 30 40 50 60 bm0330 HPLAPFWVAWVLSPSGSSVLAATGSERSKTMILASVLRSGPGGGLPLRPLLGPALALRAR :::.::: ::: .: : :::: .:.::.: gi|318 MILTSVLGSGPRSGSSLWPLLGSSLSLRVR 10 20 30 70 80 90 100 110 120 bm0330 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS :::::::::::.::::::::::::::::::..:::::::::::::::.:::::::::::: gi|318 STSATDTHHVELARERSKTVTSFYNQSAIDVVAEKPSVRLTPTMMLYSGRSQDGSHLLKS 40 50 60 70 80 90 130 140 150 160 170 180 bm0330 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ .::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: gi|318 GRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ 100 110 120 130 140 150 190 200 210 220 230 240 bm0330 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL 160 170 180 190 200 210 250 260 270 280 290 300 bm0330 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD 220 230 240 250 260 270 310 320 330 340 350 360 bm0330 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD 280 290 300 310 320 330 370 380 390 400 410 420 bm0330 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|318 YHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ 340 350 360 370 380 390 430 440 450 bm0330 GIGTDVYLRLRHIDGREESFRI :::::::::::::::::::::: gi|318 GIGTDVYLRLRHIDGREESFRI 400 410 >>gi|6685240|sp|O55028.1|BCKD_MOUSE RecName: Full=[3-met (412 aa) initn: 2612 init1: 2612 opt: 2612 Z-score: 3027.3 bits: 569.2 E(): 6.6e-160 Smith-Waterman score: 2612; 95.146% identity (98.058% similar) in 412 aa overlap (40-451:1-412) 10 20 30 40 50 60 bm0330 HPLAPFWVAWVLSPSGSSVLAATGSERSKTMILASVLRSGPGGGLPLRPLLGPALALRAR :::.::: ::: . : :::: .:.:::: gi|668 MILTSVLGSGPRSWSSLWPLLGSSLSLRAR 10 20 30 70 80 90 100 110 120 bm0330 STSATDTHHVEMARERSKTVTSFYNQSAIDAAAEKPSVRLTPTMMLYAGRSQDGSHLLKS :::::::::::.::::::::::::::::::.::::::::::::::::.:::::::::::: gi|668 STSATDTHHVELARERSKTVTSFYNQSAIDVAAEKPSVRLTPTMMLYSGRSQDGSHLLKS 40 50 60 70 80 90 130 140 150 160 170 180 bm0330 ARYLQQELPVRIAHRIKGFRCLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ .::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: gi|668 GRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEAQ 100 110 120 130 140 150 190 200 210 220 230 240 bm0330 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|668 YCQLVRQLLDDHKDVVTLLAEGLRESRKHIQDEKLVRYFLDKTLTSRLGIRMLATHHLAL 160 170 180 190 200 210 250 260 270 280 290 300 bm0330 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|668 HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLD 220 230 240 250 260 270 310 320 330 340 350 360 bm0330 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMD ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|668 YILPELLKNAMRATMESHLDTPYNVPDVVITIANNDIDLIIRISDRGGGIAHKDLDRVMD 280 290 300 310 320 330 370 380 390 400 410 420 bm0330 YHFTTAEASTQDPRISPLFGHLDMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ :::::::::::::::.:::::::::::.:::::::::::::::::::::::::::::::: gi|668 YHFTTAEASTQDPRINPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ 340 350 360 370 380 390 430 440 450 bm0330 GIGTDVYLRLRHIDGREESFRI :::::::::::::::::::::: gi|668 GIGTDVYLRLRHIDGREESFRI 400 410 451 residues in 1 query sequences 2779448989 residues in 8089198 library sequences Tcomplib [34.26] (8 proc) start: Thu Apr 16 11:24:46 2009 done: Thu Apr 16 11:27:34 2009 Total Scan time: 1002.690 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]