hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090416/iprscan-20090416-11273576/chunk_1/iprscan-20090416-11273576.nocrc
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Query sequence: bm03306
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00387                                                  67.3      2e-15   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00387      1/1     303   443 ..     1   130 []    67.3    2e-15

Alignments of top-scoring domains:
SM00387: domain 1 of 1, from 303 to 443: score 67.3, E = 2e-15
                   *->gDpdrLrqvlsNLldNAikftpegladskllsgkdgggtitvsle..
                        p++L  +l +Ll+NA ++t e++ d   ++ + ++  it+  ++ 
     bm03306   303    FIPMPLDYILPELLKNAMRATMESHLD---TPYNVPDVVITIANNdv 346  

                   ..vitVeDnGpGIppeihksiedleriFepFfrtdgsps...........
                   + +i+++D G GI+       +dl+r+ +  f+t+++++++++ ++  ++
     bm03306   347 dlIIRISDRGGGIAH------KDLDRVMDYHFTTAEASTqdprisplfgh 390  

                   .rdrpgsrsrktgGGLtGLGLaivkrlvelhgGeisve......ttFtit
                    ++++g++s    G  +G GL+ +++++e +gG++++++ ++ +t ++++
     bm03306   391 lDMHSGAQSGPMHG--FGFGLPTSRAYAEYLGGSLQLQslqgigTDVYLR 438  

                   lPlel<-*
                   l+      
     bm03306   439 LRHID    443  

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